Literature DB >> 24802905

Methods for nuclei detection, segmentation, and classification in digital histopathology: a review-current status and future potential.

Humayun Irshad, Antoine Veillard, Ludovic Roux, Daniel Racoceanu.   

Abstract

Digital pathology represents one of the major evolutions in modern medicine. Pathological examinations constitute the gold standard in many medical protocols, and also play a critical and legal role in the diagnosis process. In the conventional cancer diagnosis, pathologists analyze biopsies to make diagnostic and prognostic assessments, mainly based on the cell morphology and architecture distribution. Recently, computerized methods have been rapidly evolving in the area of digital pathology, with growing applications related to nuclei detection, segmentation, and classification. In cancer research, these approaches have played, and will continue to play a key (often bottleneck) role in minimizing human intervention, consolidating pertinent second opinions, and providing traceable clinical information. Pathological studies have been conducted for numerous cancer detection and grading applications, including brain, breast, cervix, lung, and prostate cancer grading. Our study presents, discusses, and extracts the major trends from an exhaustive overview of various nuclei detection, segmentation, feature computation, and classification techniques used in histopathology imagery, specifically in hematoxylin-eosin and immunohistochemical staining protocols. This study also enables us to measure the challenges that remain, in order to reach robust analysis of whole slide images, essential high content imaging with diagnostic biomarkers and prognosis support in digital pathology.

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Year:  2014        PMID: 24802905     DOI: 10.1109/RBME.2013.2295804

Source DB:  PubMed          Journal:  IEEE Rev Biomed Eng        ISSN: 1937-3333


  85 in total

1.  A resolution adaptive deep hierarchical (RADHicaL) learning scheme applied to nuclear segmentation of digital pathology images.

Authors:  Andrew Janowczyk; Scott Doyle; Hannah Gilmore; Anant Madabhushi
Journal:  Comput Methods Biomech Biomed Eng Imaging Vis       Date:  2016-04-28

Review 2.  Computer-Aided Histopathological Image Analysis Techniques for Automated Nuclear Atypia Scoring of Breast Cancer: a Review.

Authors:  Asha Das; Madhu S Nair; S David Peter
Journal:  J Digit Imaging       Date:  2020-10       Impact factor: 4.056

3.  Computational hepatocellular carcinoma tumor grading based on cell nuclei classification.

Authors:  Chamidu Atupelage; Hiroshi Nagahashi; Fumikazu Kimura; Masahiro Yamaguchi; Abe Tokiya; Akinori Hashiguchi; Michiie Sakamoto
Journal:  J Med Imaging (Bellingham)       Date:  2014-10-09

4.  Deep fusion of contextual and object-based representations for delineation of multiple nuclear phenotypes.

Authors:  Mina Khoshdeli; Garrett Winkelmaier; Bahram Parvin
Journal:  Bioinformatics       Date:  2019-11-01       Impact factor: 6.937

5.  Characterizing Diagnostic Search Patterns in Digital Breast Pathology: Scanners and Drillers.

Authors:  Ezgi Mercan; Linda G Shapiro; Tad T Brunyé; Donald L Weaver; Joann G Elmore
Journal:  J Digit Imaging       Date:  2018-02       Impact factor: 4.056

6.  A quantitative framework for the analysis of multimodal optical microscopy images.

Authors:  Andrew J Bower; Benjamin Chidester; Joanne Li; Youbo Zhao; Marina Marjanovic; Eric J Chaney; Minh N Do; Stephen A Boppart
Journal:  Quant Imaging Med Surg       Date:  2017-02

7.  Cell segmentation in histopathological images with deep learning algorithms by utilizing spatial relationships.

Authors:  Nuh Hatipoglu; Gokhan Bilgin
Journal:  Med Biol Eng Comput       Date:  2017-02-28       Impact factor: 2.602

Review 8.  Enhancing the Value of Histopathological Assessment of Allograft Biopsy Monitoring.

Authors:  Michelle A Wood-Trageser; Andrew J Lesniak; Anthony J Demetris
Journal:  Transplantation       Date:  2019-07       Impact factor: 4.939

9.  Fast Cell Segmentation Using Scalable Sparse Manifold Learning and Affine Transform-approximated Active Contour.

Authors:  Fuyong Xing; Lin Yang
Journal:  Med Image Comput Comput Assist Interv       Date:  2015-11-18

10.  Sensitivity analysis in digital pathology: Handling large number of parameters with compute expensive workflows.

Authors:  Jeremias Gomes; Willian Barreiros; Tahsin Kurc; Alba C M A Melo; Jun Kong; Joel H Saltz; George Teodoro
Journal:  Comput Biol Med       Date:  2019-03-13       Impact factor: 4.589

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