Literature DB >> 24799348

Measurement of the temperature of the resting rotor in analytical ultracentrifugation.

Rodolfo Ghirlando1, Huaying Zhao2, Andrea Balbo3, Grzegorz Piszczek4, Ute Curth5, Chad A Brautigam6, Peter Schuck7.   

Abstract

Accurate measurements of rotor temperature are critical for the interpretation of hydrodynamic parameters in analytical ultracentrifugation. We have recently developed methods for a more accurate determination of the temperature of a spinning rotor using iButton temperature loggers. Here we report that the temperature measured with the iButton on the counterbalance of a resting rotor, following thermal equilibration under high vacuum, closely corresponded to the temperature of the spinning rotor with a precision better than 0.2°C. This strategy offers an inexpensive and straightforward approach to monitor the accuracy of the temperature calibration and determine corrective temperature offsets. Published by Elsevier Inc.

Entities:  

Keywords:  Hydrodynamics; Sedimentation velocity; Temperature calibration

Mesh:

Substances:

Year:  2014        PMID: 24799348      PMCID: PMC4080836          DOI: 10.1016/j.ab.2014.04.029

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  13 in total

1.  Studying antibody conformations by ultracentrifugation and hydrodynamic modeling.

Authors:  Stephen E Harding; Emma Longman; Beatriz Carrasco; Alvaro Ortega; Jose Garcia de la Torre
Journal:  Methods Mol Biol       Date:  2004

2.  Prediction of hydrodynamic and other solution properties of rigid proteins from atomic- and residue-level models.

Authors:  A Ortega; D Amorós; J García de la Torre
Journal:  Biophys J       Date:  2011-08-17       Impact factor: 4.033

3.  Recorded scan times can limit the accuracy of sedimentation coefficients in analytical ultracentrifugation.

Authors:  Huaying Zhao; Rodolfo Ghirlando; Grzegorz Piszczek; Ute Curth; Chad A Brautigam; Peter Schuck
Journal:  Anal Biochem       Date:  2013-02-28       Impact factor: 3.365

4.  Solution structure of the 128 kDa enzyme I dimer from Escherichia coli and its 146 kDa complex with HPr using residual dipolar couplings and small- and wide-angle X-ray scattering.

Authors:  Charles D Schwieters; Jeong-Yong Suh; Alexander Grishaev; Rodolfo Ghirlando; Yuki Takayama; G Marius Clore
Journal:  J Am Chem Soc       Date:  2010-09-22       Impact factor: 15.419

5.  Combined use of residual dipolar couplings and solution X-ray scattering to rapidly probe rigid-body conformational transitions in a non-phosphorylatable active-site mutant of the 128 kDa enzyme I dimer.

Authors:  Yuki Takayama; Charles D Schwieters; Alexander Grishaev; Rodolfo Ghirlando; G Marius Clore
Journal:  J Am Chem Soc       Date:  2010-12-16       Impact factor: 15.419

6.  Solution properties of γ-crystallins: hydration of fish and mammal γ-crystallins.

Authors:  Huaying Zhao; Yingwei Chen; Lenka Rezabkova; Zhengrong Wu; Graeme Wistow; Peter Schuck
Journal:  Protein Sci       Date:  2013-11-27       Impact factor: 6.725

7.  Improving the thermal, radial, and temporal accuracy of the analytical ultracentrifuge through external references.

Authors:  Rodolfo Ghirlando; Andrea Balbo; Grzegorz Piszczek; Patrick H Brown; Marc S Lewis; Chad A Brautigam; Peter Schuck; Huaying Zhao
Journal:  Anal Biochem       Date:  2013-05-24       Impact factor: 3.365

8.  Analytical Ultracentrifugation as a Tool for Studying Protein Interactions.

Authors:  Peter Schuck
Journal:  Biophys Rev       Date:  2013-06-01

9.  Structural basis for enzyme I inhibition by α-ketoglutarate.

Authors:  Vincenzo Venditti; Rodolfo Ghirlando; G Marius Clore
Journal:  ACS Chem Biol       Date:  2013-03-29       Impact factor: 5.100

10.  Improved measurement of the rotor temperature in analytical ultracentrifugation.

Authors:  Huaying Zhao; Andrea Balbo; Howard Metger; Robert Clary; Rodolfo Ghirlando; Peter Schuck
Journal:  Anal Biochem       Date:  2014-02-14       Impact factor: 3.365

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  9 in total

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Authors:  George M Bou-Assaf; Ivan L Budyak; Michael Brenowitz; Eric S Day; David Hayes; John Hill; Ranajoy Majumdar; Paola Ringhieri; Peter Schuck; Jasper C Lin
Journal:  J Pharm Sci       Date:  2022-01-02       Impact factor: 3.784

2.  Biochemical Roles for Conserved Residues in the Bacterial Fatty Acid-binding Protein Family.

Authors:  Tyler C Broussard; Darcie J Miller; Pamela Jackson; Amanda Nourse; Stephen W White; Charles O Rock
Journal:  J Biol Chem       Date:  2016-01-16       Impact factor: 5.157

3.  Calibrating analytical ultracentrifuges.

Authors:  Huaying Zhao; Ai Nguyen; Samuel C To; Peter Schuck
Journal:  Eur Biophys J       Date:  2021-01-04       Impact factor: 1.733

4.  Quantitative Analysis of Protein Self-Association by Sedimentation Velocity.

Authors:  Huaying Zhao; Wenqi Li; Wendan Chu; Mary Bollard; Regina Adão; Peter Schuck
Journal:  Curr Protoc Protein Sci       Date:  2020-09

5.  A multilaboratory comparison of calibration accuracy and the performance of external references in analytical ultracentrifugation.

Authors:  Huaying Zhao; Rodolfo Ghirlando; Carlos Alfonso; Fumio Arisaka; Ilan Attali; David L Bain; Marina M Bakhtina; Donald F Becker; Gregory J Bedwell; Ahmet Bekdemir; Tabot M D Besong; Catherine Birck; Chad A Brautigam; William Brennerman; Olwyn Byron; Agnieszka Bzowska; Jonathan B Chaires; Catherine T Chaton; Helmut Cölfen; Keith D Connaghan; Kimberly A Crowley; Ute Curth; Tina Daviter; William L Dean; Ana I Díez; Christine Ebel; Debra M Eckert; Leslie E Eisele; Edward Eisenstein; Patrick England; Carlos Escalante; Jeffrey A Fagan; Robert Fairman; Ron M Finn; Wolfgang Fischle; José García de la Torre; Jayesh Gor; Henning Gustafsson; Damien Hall; Stephen E Harding; José G Hernández Cifre; Andrew B Herr; Elizabeth E Howell; Richard S Isaac; Shu-Chuan Jao; Davis Jose; Soon-Jong Kim; Bashkim Kokona; Jack A Kornblatt; Dalibor Kosek; Elena Krayukhina; Daniel Krzizike; Eric A Kusznir; Hyewon Kwon; Adam Larson; Thomas M Laue; Aline Le Roy; Andrew P Leech; Hauke Lilie; Karolin Luger; Juan R Luque-Ortega; Jia Ma; Carrie A May; Ernest L Maynard; Anna Modrak-Wojcik; Yee-Foong Mok; Norbert Mücke; Luitgard Nagel-Steger; Geeta J Narlikar; Masanori Noda; Amanda Nourse; Tomas Obsil; Chad K Park; Jin-Ku Park; Peter D Pawelek; Erby E Perdue; Stephen J Perkins; Matthew A Perugini; Craig L Peterson; Martin G Peverelli; Grzegorz Piszczek; Gali Prag; Peter E Prevelige; Bertrand D E Raynal; Lenka Rezabkova; Klaus Richter; Alison E Ringel; Rose Rosenberg; Arthur J Rowe; Arne C Rufer; David J Scott; Javier G Seravalli; Alexandra S Solovyova; Renjie Song; David Staunton; Caitlin Stoddard; Katherine Stott; Holger M Strauss; Werner W Streicher; John P Sumida; Sarah G Swygert; Roman H Szczepanowski; Ingrid Tessmer; Ronald T Toth; Ashutosh Tripathy; Susumu Uchiyama; Stephan F W Uebel; Satoru Unzai; Anna Vitlin Gruber; Peter H von Hippel; Christine Wandrey; Szu-Huan Wang; Steven E Weitzel; Beata Wielgus-Kutrowska; Cynthia Wolberger; Martin Wolff; Edward Wright; Yu-Sung Wu; Jacinta M Wubben; Peter Schuck
Journal:  PLoS One       Date:  2015-05-21       Impact factor: 3.240

6.  A radial calibration window for analytical ultracentrifugation.

Authors:  Thomas LeBrun; Peter Schuck; Ren Wei; Justine S Yoon; Xianghui Dong; Nicole Y Morgan; Jeffrey Fagan; Huaying Zhao
Journal:  PLoS One       Date:  2018-07-30       Impact factor: 3.240

7.  Subunit Flexibility of Multimeric von Willebrand Factor/Factor VIII Complexes.

Authors:  Ernest T Parker; Sandra L Haberichter; Pete Lollar
Journal:  ACS Omega       Date:  2022-08-25

8.  3D-Printing for Analytical Ultracentrifugation.

Authors:  Abhiksha Desai; Jonathan Krynitsky; Thomas J Pohida; Huaying Zhao; Peter Schuck
Journal:  PLoS One       Date:  2016-08-15       Impact factor: 3.240

9.  Measuring macromolecular size distributions and interactions at high concentrations by sedimentation velocity.

Authors:  Sumit K Chaturvedi; Jia Ma; Patrick H Brown; Huaying Zhao; P Schuck
Journal:  Nat Commun       Date:  2018-10-24       Impact factor: 14.919

  9 in total

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