Literature DB >> 24530285

Improved measurement of the rotor temperature in analytical ultracentrifugation.

Huaying Zhao1, Andrea Balbo2, Howard Metger3, Robert Clary3, Rodolfo Ghirlando4, Peter Schuck5.   

Abstract

Sedimentation velocity is a classical method for measuring the hydrodynamic, translational friction coefficient of biological macromolecules. In a recent study comparing various analytical ultracentrifuges, we showed that external calibration of the scan time, radial magnification, and temperature is critically important for accurate measurements (Anal. Biochem. 440 (2013) 81-95). To achieve accurate temperature calibration, we introduced the use of an autonomous miniature temperature logging integrated circuit (Maxim Thermochron iButton) that can be inserted into an ultracentrifugation cell assembly and spun at low rotor speeds. In the current work, we developed an improved holder for the temperature sensor located in the rotor handle. This has the advantage of not reducing the rotor capacity and allowing for a direct temperature measurement of the spinning rotor during high-speed sedimentation velocity experiments up to 60,000rpm. We demonstrated the sensitivity of this approach by monitoring the adiabatic cooling due to rotor stretching during rotor acceleration and the reverse process on rotor deceleration. Based on this, we developed a procedure to approximate isothermal rotor acceleration for better temperature control. Published by Elsevier Inc.

Entities:  

Keywords:  Sedimentation velocity; Temperature calibration

Mesh:

Year:  2014        PMID: 24530285      PMCID: PMC4051143          DOI: 10.1016/j.ab.2014.02.006

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  20 in total

1.  A new adaptive grid-size algorithm for the simulation of sedimentation velocity profiles in analytical ultracentrifugation.

Authors:  Patrick H Brown; Peter Schuck
Journal:  Comput Phys Commun       Date:  2008-01-15       Impact factor: 4.390

2.  A device for the measurement of rotor temperature in the air-driven ultracentrifuge.

Authors:  P G ECKER; J BLUM; C W HIATT
Journal:  Rev Sci Instrum       Date:  1949-11       Impact factor: 1.523

3.  Prediction of hydrodynamic and other solution properties of rigid proteins from atomic- and residue-level models.

Authors:  A Ortega; D Amorós; J García de la Torre
Journal:  Biophys J       Date:  2011-08-17       Impact factor: 4.033

4.  Recorded scan times can limit the accuracy of sedimentation coefficients in analytical ultracentrifugation.

Authors:  Huaying Zhao; Rodolfo Ghirlando; Grzegorz Piszczek; Ute Curth; Chad A Brautigam; Peter Schuck
Journal:  Anal Biochem       Date:  2013-02-28       Impact factor: 3.365

5.  Determination of corrected sedimentation coefficient at different temperatures using the MSE analytical ultracentrifuge.

Authors:  A J Rowe; G M Khan
Journal:  Anal Biochem       Date:  1972-02       Impact factor: 3.365

6.  Temperature measurement and control of analytical rotors in the ultracentrifuge.

Authors:  L Gropper; W Boyd
Journal:  Anal Biochem       Date:  1965-05       Impact factor: 3.365

7.  An optical thermometer for direct measurement of cell temperature in the Beckman instruments XL-A analytical ultracentrifuge.

Authors:  S Liu; W F Stafford
Journal:  Anal Biochem       Date:  1995-01-01       Impact factor: 3.365

8.  Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling.

Authors:  P Schuck
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

9.  Improving the thermal, radial, and temporal accuracy of the analytical ultracentrifuge through external references.

Authors:  Rodolfo Ghirlando; Andrea Balbo; Grzegorz Piszczek; Patrick H Brown; Marc S Lewis; Chad A Brautigam; Peter Schuck; Huaying Zhao
Journal:  Anal Biochem       Date:  2013-05-24       Impact factor: 3.365

10.  Overview of current methods in sedimentation velocity and sedimentation equilibrium analytical ultracentrifugation.

Authors:  Huaying Zhao; Chad A Brautigam; Rodolfo Ghirlando; Peter Schuck
Journal:  Curr Protoc Protein Sci       Date:  2013-02
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  9 in total

1.  Variable Field Analytical Ultracentrifugation: II. Gravitational Sweep Sedimentation Velocity.

Authors:  Jia Ma; Huaying Zhao; Julia Sandmaier; J Alexander Liddle; Peter Schuck
Journal:  Biophys J       Date:  2016-01-05       Impact factor: 4.033

2.  Measurement of the temperature of the resting rotor in analytical ultracentrifugation.

Authors:  Rodolfo Ghirlando; Huaying Zhao; Andrea Balbo; Grzegorz Piszczek; Ute Curth; Chad A Brautigam; Peter Schuck
Journal:  Anal Biochem       Date:  2014-05-04       Impact factor: 3.365

Review 3.  Best Practices for Aggregate Quantitation of Antibody Therapeutics by Sedimentation Velocity Analytical Ultracentrifugation.

Authors:  George M Bou-Assaf; Ivan L Budyak; Michael Brenowitz; Eric S Day; David Hayes; John Hill; Ranajoy Majumdar; Paola Ringhieri; Peter Schuck; Jasper C Lin
Journal:  J Pharm Sci       Date:  2022-01-02       Impact factor: 3.784

4.  Calibrating analytical ultracentrifuges.

Authors:  Huaying Zhao; Ai Nguyen; Samuel C To; Peter Schuck
Journal:  Eur Biophys J       Date:  2021-01-04       Impact factor: 1.733

5.  A multilaboratory comparison of calibration accuracy and the performance of external references in analytical ultracentrifugation.

Authors:  Huaying Zhao; Rodolfo Ghirlando; Carlos Alfonso; Fumio Arisaka; Ilan Attali; David L Bain; Marina M Bakhtina; Donald F Becker; Gregory J Bedwell; Ahmet Bekdemir; Tabot M D Besong; Catherine Birck; Chad A Brautigam; William Brennerman; Olwyn Byron; Agnieszka Bzowska; Jonathan B Chaires; Catherine T Chaton; Helmut Cölfen; Keith D Connaghan; Kimberly A Crowley; Ute Curth; Tina Daviter; William L Dean; Ana I Díez; Christine Ebel; Debra M Eckert; Leslie E Eisele; Edward Eisenstein; Patrick England; Carlos Escalante; Jeffrey A Fagan; Robert Fairman; Ron M Finn; Wolfgang Fischle; José García de la Torre; Jayesh Gor; Henning Gustafsson; Damien Hall; Stephen E Harding; José G Hernández Cifre; Andrew B Herr; Elizabeth E Howell; Richard S Isaac; Shu-Chuan Jao; Davis Jose; Soon-Jong Kim; Bashkim Kokona; Jack A Kornblatt; Dalibor Kosek; Elena Krayukhina; Daniel Krzizike; Eric A Kusznir; Hyewon Kwon; Adam Larson; Thomas M Laue; Aline Le Roy; Andrew P Leech; Hauke Lilie; Karolin Luger; Juan R Luque-Ortega; Jia Ma; Carrie A May; Ernest L Maynard; Anna Modrak-Wojcik; Yee-Foong Mok; Norbert Mücke; Luitgard Nagel-Steger; Geeta J Narlikar; Masanori Noda; Amanda Nourse; Tomas Obsil; Chad K Park; Jin-Ku Park; Peter D Pawelek; Erby E Perdue; Stephen J Perkins; Matthew A Perugini; Craig L Peterson; Martin G Peverelli; Grzegorz Piszczek; Gali Prag; Peter E Prevelige; Bertrand D E Raynal; Lenka Rezabkova; Klaus Richter; Alison E Ringel; Rose Rosenberg; Arthur J Rowe; Arne C Rufer; David J Scott; Javier G Seravalli; Alexandra S Solovyova; Renjie Song; David Staunton; Caitlin Stoddard; Katherine Stott; Holger M Strauss; Werner W Streicher; John P Sumida; Sarah G Swygert; Roman H Szczepanowski; Ingrid Tessmer; Ronald T Toth; Ashutosh Tripathy; Susumu Uchiyama; Stephan F W Uebel; Satoru Unzai; Anna Vitlin Gruber; Peter H von Hippel; Christine Wandrey; Szu-Huan Wang; Steven E Weitzel; Beata Wielgus-Kutrowska; Cynthia Wolberger; Martin Wolff; Edward Wright; Yu-Sung Wu; Jacinta M Wubben; Peter Schuck
Journal:  PLoS One       Date:  2015-05-21       Impact factor: 3.240

6.  Accounting for photophysical processes and specific signal intensity changes in fluorescence-detected sedimentation velocity.

Authors:  Huaying Zhao; Jia Ma; Maria Ingaramo; Eric Andrade; Jeff MacDonald; Glen Ramsay; Grzegorz Piszczek; George H Patterson; Peter Schuck
Journal:  Anal Chem       Date:  2014-08-28       Impact factor: 6.986

7.  A simple cell-alignment protocol for sedimentation velocity analytical ultracentrifugation to complement mechanical and optical alignment procedures.

Authors:  Guy Channell; Vlad Dinu; Gary G Adams; Stephen E Harding
Journal:  Eur Biophys J       Date:  2018-08-29       Impact factor: 1.733

8.  A radial calibration window for analytical ultracentrifugation.

Authors:  Thomas LeBrun; Peter Schuck; Ren Wei; Justine S Yoon; Xianghui Dong; Nicole Y Morgan; Jeffrey Fagan; Huaying Zhao
Journal:  PLoS One       Date:  2018-07-30       Impact factor: 3.240

9.  A multiwavelength emission detector for analytical ultracentrifugation.

Authors:  Simon E Wawra; Georgy Onishchukov; Maria Maranska; Siegfried Eigler; Johannes Walter; Wolfgang Peukert
Journal:  Nanoscale Adv       Date:  2019-10-04
  9 in total

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