Literature DB >> 24791903

De novo truncating mutations in AHDC1 in individuals with syndromic expressive language delay, hypotonia, and sleep apnea.

Fan Xia1, Matthew N Bainbridge2, Tiong Yang Tan3, Michael F Wangler4, Angela E Scheuerle5, Elaine H Zackai6, Margaret H Harr6, V Reid Sutton4, Roopa L Nalam7, Wenmiao Zhu1, Margot Nash8, Monique M Ryan8, Joy Yaplito-Lee8, Jill V Hunter9, Matthew A Deardorff6, Samantha J Penney1, Arthur L Beaudet1, Sharon E Plon4, Eric A Boerwinkle10, James R Lupski4, Christine M Eng1, Donna M Muzny2, Yaping Yang1, Richard A Gibbs11.   

Abstract

Clinical whole-exome sequencing (WES) for identification of mutations leading to Mendelian disease has been offered to the medical community since 2011. Clinically undiagnosed neurological disorders are the most frequent basis for test referral, and currently, approximately 25% of such cases are diagnosed at the molecular level. To date, there are approximately 4,000 "known" disease-associated loci, and many are associated with striking dysmorphic features, making genotype-phenotype correlations relatively straightforward. A significant fraction of cases, however, lack characteristic dysmorphism or clinical pathognomonic traits and are dependent upon molecular tests for definitive diagnoses. Further, many molecular diagnoses are guided by recent gene-disease association discoveries. Hence, there is a critical interplay between clinical testing and research leading to gene-disease association discovery. Here, we describe four probands, all of whom presented with hypotonia, intellectual disability, global developmental delay, and mildly dysmorphic facial features. Three of the four also had sleep apnea. Each was a simplex case without a remarkable family history. Using WES, we identified AHDC1 de novo truncating mutations that most likely cause this genetic syndrome.
Copyright © 2014 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 24791903      PMCID: PMC4067559          DOI: 10.1016/j.ajhg.2014.04.006

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  21 in total

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Journal:  Nat Genet       Date:  2012-03-18       Impact factor: 38.330

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Authors:  Svetlana A Shabalina; Aleksey Y Ogurtsov; Alexey N Spiridonov; Pavel S Novichkov; Nikolay A Spiridonov; Eugene V Koonin
Journal:  Mol Biol Evol       Date:  2010-04-01       Impact factor: 16.240

10.  Whole exome capture in solution with 3 Gbp of data.

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Journal:  Genome Biol       Date:  2010-06-17       Impact factor: 13.583

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  31 in total

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Journal:  Am J Hum Genet       Date:  2015-03-26       Impact factor: 11.025

3.  Whole-Exome Sequencing Identifies a de novo AHDC1 Mutation in a Colombian Patient with Xia-Gibbs Syndrome.

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4.  Novel AHDC1 Gene Mutation in a Brazilian Individual: Implications of Xia-Gibbs Syndrome.

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Journal:  Mol Syndromol       Date:  2020-02-01

5.  Heterozygous Truncating Variants in POMP Escape Nonsense-Mediated Decay and Cause a Unique Immune Dysregulatory Syndrome.

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Journal:  Am J Hum Genet       Date:  2018-05-24       Impact factor: 11.025

6.  Novel genetic causes for cerebral visual impairment.

Authors:  Daniëlle G M Bosch; F Nienke Boonstra; Nicole de Leeuw; Rolph Pfundt; Willy M Nillesen; Joep de Ligt; Christian Gilissen; Shalini Jhangiani; James R Lupski; Frans P M Cremers; Bert B A de Vries
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7.  The phenotypic spectrum of Xia-Gibbs syndrome.

Authors:  Yunyun Jiang; Michael F Wangler; Amy L McGuire; James R Lupski; Jennifer E Posey; Michael M Khayat; David R Murdock; Luis Sanchez-Pulido; Chris P Ponting; Fan Xia; Jill V Hunter; Qingchang Meng; Mullai Murugan; Richard A Gibbs
Journal:  Am J Med Genet A       Date:  2018-04-25       Impact factor: 2.802

8.  The genomic landscape of balanced cytogenetic abnormalities associated with human congenital anomalies.

Authors:  Claire Redin; Harrison Brand; Ryan L Collins; Tammy Kammin; Elyse Mitchell; Jennelle C Hodge; Carrie Hanscom; Vamsee Pillalamarri; Catarina M Seabra; Mary-Alice Abbott; Omar A Abdul-Rahman; Erika Aberg; Rhett Adley; Sofia L Alcaraz-Estrada; Fowzan S Alkuraya; Yu An; Mary-Anne Anderson; Caroline Antolik; Kwame Anyane-Yeboa; Joan F Atkin; Tina Bartell; Jonathan A Bernstein; Elizabeth Beyer; Ian Blumenthal; Ernie M H F Bongers; Eva H Brilstra; Chester W Brown; Hennie T Brüggenwirth; Bert Callewaert; Colby Chiang; Ken Corning; Helen Cox; Edwin Cuppen; Benjamin B Currall; Tom Cushing; Dezso David; Matthew A Deardorff; Annelies Dheedene; Marc D'Hooghe; Bert B A de Vries; Dawn L Earl; Heather L Ferguson; Heather Fisher; David R FitzPatrick; Pamela Gerrol; Daniela Giachino; Joseph T Glessner; Troy Gliem; Margo Grady; Brett H Graham; Cristin Griffis; Karen W Gripp; Andrea L Gropman; Andrea Hanson-Kahn; David J Harris; Mark A Hayden; Rosamund Hill; Ron Hochstenbach; Jodi D Hoffman; Robert J Hopkin; Monika W Hubshman; A Micheil Innes; Mira Irons; Melita Irving; Jessie C Jacobsen; Sandra Janssens; Tamison Jewett; John P Johnson; Marjolijn C Jongmans; Stephen G Kahler; David A Koolen; Jerome Korzelius; Peter M Kroisel; Yves Lacassie; William Lawless; Emmanuelle Lemyre; Kathleen Leppig; Alex V Levin; Haibo Li; Hong Li; Eric C Liao; Cynthia Lim; Edward J Lose; Diane Lucente; Michael J Macera; Poornima Manavalan; Giorgia Mandrile; Carlo L Marcelis; Lauren Margolin; Tamara Mason; Diane Masser-Frye; Michael W McClellan; Cinthya J Zepeda Mendoza; Björn Menten; Sjors Middelkamp; Liya R Mikami; Emily Moe; Shehla Mohammed; Tarja Mononen; Megan E Mortenson; Graciela Moya; Aggie W Nieuwint; Zehra Ordulu; Sandhya Parkash; Susan P Pauker; Shahrin Pereira; Danielle Perrin; Katy Phelan; Raul E Piña Aguilar; Pino J Poddighe; Giulia Pregno; Salmo Raskin; Linda Reis; William Rhead; Debra Rita; Ivo Renkens; Filip Roelens; Jayla Ruliera; Patrick Rump; Samantha L P Schilit; Ranad Shaheen; Rebecca Sparkes; Erica Spiegel; Blair Stevens; Matthew R Stone; Julia Tagoe; Joseph V Thakuria; Bregje W van Bon; Jiddeke van de Kamp; Ineke van Der Burgt; Ton van Essen; Conny M van Ravenswaaij-Arts; Markus J van Roosmalen; Sarah Vergult; Catharina M L Volker-Touw; Dorothy P Warburton; Matthew J Waterman; Susan Wiley; Anna Wilson; Maria de la Concepcion A Yerena-de Vega; Roberto T Zori; Brynn Levy; Han G Brunner; Nicole de Leeuw; Wigard P Kloosterman; Erik C Thorland; Cynthia C Morton; James F Gusella; Michael E Talkowski
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Review 9.  Clinical Application of Genome and Exome Sequencing as a Diagnostic Tool for Pediatric Patients: a Scoping Review of the Literature.

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Journal:  Genet Med       Date:  2018-05-14       Impact factor: 8.822

10.  Clinical application of whole-exome sequencing across clinical indications.

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Journal:  Genet Med       Date:  2015-12-03       Impact factor: 8.822

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