| Literature DB >> 24788697 |
Chaoyang Sun1, Na Li1, Dong Ding1, Danhui Weng1, Li Meng1, Gang Chen1, Ding Ma1.
Abstract
OBJECTIVE: The role of BRCA dysfunction on the prognosis of patients with epithelial ovarian cancer (EOCs) remains controversial. This systematic review tried to assess the role of BRCA dysfunction, including BRCA1/2 germline, somatic mutations, low BRCA1 protein/mRNA expression or BRCA1 promoter methylation, as prognostic factor in EOCs.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24788697 PMCID: PMC4006804 DOI: 10.1371/journal.pone.0095285
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow chart of publication selection.
Characteristics of studies of patients with BRCA1/2 mutated ovarian cancer.
| First author | Study year,published year | Country | Histology | Stage | No. of cases/controls | Laboratorymethods | BRCA status | Germline/somatic | Mutation Types | Treatment | Survivalresult |
| Aida | 1984–1996,1998 | Japan | se | I–III | 13/29 | SCCP,PCR,seq | BRCA1 | Germ | Deleterious | 2 | positive |
| Alsop | 2002–2006,2012 | Austrilia | se | I–IV | 118/536 | PCR,seq, MLPA | BRCA1/2 | Germ | Deleterious | 2 | positive |
| Artioli | ,2010 | Italian | all | I–IV | 48/40 | PCR,seq | BRCA1/2 | Germ | Deleterious | 1+2 | positive |
| Boyd | 1986–1998,2000 | U.S.A | all | I–IV | 88/100 | PCR,seq | BRCA1/2 | Germ | Deleterious | 2 | positive |
| Brozek | 1995–2004,2008 | Poland | se+CCC | I–IV | 21/130 | DHPLC,RFLP,seq | BRCA1/2 | Germ | Deleterious+ VUS | 2 | positive |
| Buller | 1990–2000,2002 | U.S.A | all | I–IV | 59/59 | PTT,SSCP,seq | BRCA1 | Mixed | Deleterious+ VUS | 2 | negative |
| Cass | 1990–2001,2003 | U.S.A | all | III–IV | 29/25 | SSCR,seq | BRCA1/2 | Germ | Deleterious | 2 | positive |
| Chetrit | 1994–1999,2008 | Israel | all | I–IV | 213/392 | PCR,seq | BRCA1/2 | Germ | Deleterious | 2 | positive |
| David | 1994–1999,2002 | Israel | all | I–IV | 229/549 | SCCP,seq | BRCA1/2 | Germ+Somatic | Deleterious | 2 | positive |
| Dann | 1999–2007,2012 | U.S.A | all | II–IV | 15/38 | PCR,seq | BRCA1/2 | Germ+Somatic | Deleterious | 2 | negative |
| Gallagher | 1996–2006,2011 | U.S.A | all | III–IV | 36/74 | PCR,seq | BRCA1/2 | Germ | Deleterious | 2 | positive |
| Hennessy | 1990–2006.2010 | U.S.A | all | I–IV | 43/192 | PCR,seq | BRCA1/2 | Germ+Somatic | Deleterious | 2 | positive |
| Hyman | 2001–2010,2012 | U.S.A | se | III–IV | 69/298 | PCR,seq | BRCA1/2 | Germ | Deleterious | 2 | positive |
| Johannsson | 1958–1995,1998 | Swedish | all | I–IV | 38/97 | PTT,SSCP,seq | BRCA1 | Germ | Deleterious | 2+3 | negative |
| Lacour | 1996–2007,2011 | U.S.A | all | III–IV | 95/183 | PCR,seq | BRCA1/2 | Germ | Deleterious | – | positive |
| Majdak | 1997–2002,2005 | Poland | se+Mu | I–IV | 18/171 | F-CSGE,seq | BRCA1 | Germ | Deleterious | 2 | positive |
| McLaughlin | 1995–1995,2002–2004,2012 | Canada | all | I–IV | 218/1408 | PTT, seq,DGGE, DHPLC | BRCA1/2 | Germ | Deleterious | 2 | negative |
| Pal | 2000–2003,2007 | West central Florida | all | III–IV | 32/177 | PCR,seq | BRCA1/2 | Germ | Deleterious+ VUS | – | negative |
| Pharoah | ,1999 | U.K | all | I–IV | 151/119 | PTT,SSCP | BRCA1/2 | Germ | Deleterious | – | negative |
| Ramus | 1992–1997,2001 | Israel | all | I–IV | 27/71 | SSCP,PCR,seq | BRCA1/2 | Germ | Deleterious | – | negative |
| Rubin | ,1996 | U.S.A | all | III–IV | 43/43 | SSCP,PCR,seq | BRCA1 | Germ | Deleterious+ VUS | – | positive |
| Tan | 1991–2006,2008 | U.K | all | III–IV | 22/44 | SCCP,seq | BRCA1/2 | Germ | Deleterious+ VUS | 2 | positive |
| Vencken | 1980–2009,2011 | Netherlands | all | I–IV | 112/222 | PCR,seq | BRCA1/2 | Germ | unknown | 2 | positive |
| Yang | ,2011 | multi-country | all | III–IV | 59/251 | exom seq | BRCA1/2 | Germ+Somatic | Deleterious+ VUS | 2 | positive |
| Zweemer | ,1999 | Netherlands | – | – | 42/84 | PTT,PCR | BRCA1/2 | Germ | Deleterious | – | positive |
| Zweemer | ,2001 | Netherlands | All | I–IV | 23/17 | PTT,PCR,seq | BRCA1/2 | Germ | Deleterious | – | negative |
Histology: pathological histology of ovarian cancer, se = serous ovarian cancer, CCC = clear cell cancer of, Mu = mucinous ovarian cancer. all = almost all of the epithelial ovarian cancer types, including serous, mucinous, clear cell cancer, etc.
Laboratory methods: laboratory methods used to detect BRCA1/2 mutation, PTT = Protein truncation test, SSCP = Single-Strand Conformation Polymorphism, seq = sequencing, DGGE = fluorescent multiplex denaturing gradient gel electrophoresis, MLPA = multiplex ligation-dependent probe amplification, DHPLC = Denaturing high performance liquid chromatography, RFLP = Restriction fragment length polymorphisms, F-CSGE = Fluorescence-based Conformation Sensitive Gel Electrophoresis.
Germline/somatic: Germ = germline mutation, Mixed = BRCA1 germline/somatic mutation or BRCA1 promoter methylation.
Mutation types: VUS = variants of unknown significance.
Treatment: chemotherapy used, 1 = only Platinum was used, 2 = Platinum-based chemotherapy, 3 = other agents without Platinum, like Paclitaxel, etc.
Characteristics of studies of patients of ovarian cancer with low BRCA1 expression measured by IHC.
| Firstauthor | Study year,published year | Country | stage | Histology | No. of cases/controls | Clone | dilution | Retrieval | readers | Doubleblind | Cutoff | Low% | treatment | Survivalresult |
| Weberpals | 2008,2011 | Canada | II–IV | all | 75/41 | MS110 | 1∶100 | – | 2 | Yes | 10% | 65% | 1 | positive |
| Carser | 1998–2004,2011 | U.K | I–IV | all | 120/172 | MS110 | – | steam heat | 2 | Yes | 10% | 41% | 1 | positive |
| Gan | 1991–2007,2013 | U.K | I–IV | se | 112/19 | MS110 | 1∶80 | microwave | 1 | Yes | ≤70 | 84.4% | 2 | positive |
| Kaern | 1990–1992,2005 | Norway | III | all | 30/16 | MS110 | 1∶200 | microwave | No | 10% | 65.20% | 2 | negative | |
| Sirisabya | 1996–1999,2007 | Thailand | I–III | all | 87/12 | – | – | microwave | 1 | No | 10% | 87.80% | 1 | negative |
| Thrall | ,2006 | U.S.A | I–III | all | 97/55 | MS110 | 1∶50 | steam heat | 2 | Yes | 10% | 63.8% | 1 | positive |
| Swisher | ,2009 | U.S.A | I–IV | all | 39/76 | MS110 | 1∶250 | steam heat | No | 10% | 34% | 2 | positive | |
| Radosa | 2000–2005,2011 | Germany | III–IV | all | 12/15 | MS110 | 1∶200 | heat | 2 | Yes | 10% | 44.40% | 1 | positive |
| Yu | 1996–1998,2005 | China | I–IV | all | 35/15 | MS110 | 1∶100 | – | – | 10% | 70% | 2 | negative |
Histology: pathological histology of ovarian cancer, all = almost all of the epithelial ovarian cancer types, including serous, mucinous, clear cell cancer, etc, se = serous ovarian cancer.
Treatment: chemotherapy used, 1 = only Platinum was used, 2 = Platinum-based chemotherapy.
*BRCA1 (H-score≤70) defined as the BRCA1-deficient group.
Characteristics of studies of patients of ovarian cancer with low BRCA1 mRNA expression or BRCA1 promoter methylation.
| First author | Study year, published year | Country | Histology | stage | No. of cases/controls | Methods of methylation detecting | Treatment | significance | |
| RT-PCR | Quinn | ,2007 | U.K | all | I–IV | 47/23 | 2 | positive | |
| Weberpals | 1997–2005,2009 | Canada | all | II–IV | 25/26 | 2 | positive | ||
| methylation | Wiley | 1991–2000,2006 | Italy | all | I–IV | 44/171 | MSP | 2 | negative |
| Chiang | 1986–2001,2006 | USA | – | I–IV | 10/25 | MSRE+ Southern blot+ MSP | 2 | negative |
Histology: pathological histology of ovarian cancer, all = almost all of the epithelial ovarian cancer types, including serous, mucinous, clear cell cancer, etc.
Methods of methylation detecting: methods of methylation detecting, MSP = methylation-specific polymerase chain reaction (PCR) analysis, MSRE = methylation-sensitive restriction enzyme digestion.
Treatment: chemotherapy used, 2 = Platinum-based chemotherapy.
Figure 2Summary hazard ratios (HRs) and 95% confidence intervals (CIs) of epithelial ovarian cancer OS for BRCA dysfunction status.
Horizontal lines represent 95% CIs; diamonds represent summary estimates with corresponding 95% CIs. Test for heterogeneity: P = .000, I 2 = 61.7%. A random-effects model was used for analysis.
Figure 3Subgroup meta-analysis of summary hazard ratios (HRs) and 95% confidence intervals (CIs) of ovarian cancer OS for different BRCA mutation statuses.
A: BRCA1 mutation. B: BRCA2 mutation. Horizontal lines represent 95% CIs; diamonds represent summary estimates with corresponding 95% CIs. Test for heterogeneity: A: P = .251, I 2 = 20.2%, a fixed-effects model was used; B: P = .023, I 2 = 55.1%, a random-effects model was used.
Figure 4Summary hazard ratios (HRs) and 95% confidence intervals (CIs) of ovarian cancer PFS for BRCA dysfunction status.
Horizontal lines represent 95% CIs; diamonds represent summary estimates with corresponding 95% CIs. Test for heterogeneity: P = .118, I 2 = 29.3%. A fixed-effects model was used.
Figure 5Begg’s funnel plots of the natural logarithm of the hazard ratios (HRs) and the SE of the natural logarithm of the HRs for all of the included studies reported with OS and PFS.
A: Begg’s funnel plots for all of the included studies reported with OS, the dashed line represents 95% confidence intervals (CIs). Circles represent individual studies. Begg’s test: P = 0.221. B: Begg’s funnel plots for all of the included studies reported with PFS, the dashed line represents 95% confidence intervals (CIs). Circles represent individual studies. Begg’s test: P = 0.880.