Literature DB >> 24784253

Vibrational solvatochromism. II. A first-principle theory of solvation-induced vibrational frequency shift based on effective fragment potential method.

Bartosz Błasiak1, Minhaeng Cho1.   

Abstract

Vibrational solvatochromism is a solvation-induced effect on fundamental vibrational frequencies of molecules in solutions. Here we present a detailed first-principle coarse-grained theory of vibrational solvatochromism, which is an extension of our previous work [B. Błasiak, H. Lee, and M. Cho, J. Chem. Phys. 139(4), 044111 (2013)] by taking into account electrostatic, exchange-repulsion, polarization, and charge-transfer interactions. By applying our theory to the model N-methylacetamide-water clusters, solute-solvent interaction-induced effects on amide I vibrational frequency are fully elucidated at Hartree-Fock level. Although the electrostatic interaction between distributed multipole moments of solute and solvent molecules plays the dominant role, the contributions from exchange repulsion and induced dipole-electric field interactions are found to be of comparable importance in short distance range, whereas the charge-transfer effect is negligible. The overall frequency shifts calculated by taking into account the contributions of electrostatics, exchange-repulsion, and polarization terms are in quantitative agreement with ab initio results obtained at the Hartree-Fock level of theory.

Entities:  

Year:  2014        PMID: 24784253     DOI: 10.1063/1.4872040

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  9 in total

Review 1.  Vibrational Spectroscopic Map, Vibrational Spectroscopy, and Intermolecular Interaction.

Authors:  Carlos R Baiz; Bartosz Błasiak; Jens Bredenbeck; Minhaeng Cho; Jun-Ho Choi; Steven A Corcelli; Arend G Dijkstra; Chi-Jui Feng; Sean Garrett-Roe; Nien-Hui Ge; Magnus W D Hanson-Heine; Jonathan D Hirst; Thomas L C Jansen; Kijeong Kwac; Kevin J Kubarych; Casey H Londergan; Hiroaki Maekawa; Mike Reppert; Shinji Saito; Santanu Roy; James L Skinner; Gerhard Stock; John E Straub; Megan C Thielges; Keisuke Tominaga; Andrei Tokmakoff; Hajime Torii; Lu Wang; Lauren J Webb; Martin T Zanni
Journal:  Chem Rev       Date:  2020-06-29       Impact factor: 60.622

2.  Perturbation Approach for Computing Infrared Spectra of the Local Mode of Probe Molecules.

Authors:  Rui-Jie Xue; Adam Grofe; He Yin; Zexing Qu; Jiali Gao; Hui Li
Journal:  J Chem Theory Comput       Date:  2016-12-07       Impact factor: 6.006

3.  Conformational Heterogeneity and the Affinity of Substrate Molecular Recognition by Cytochrome P450cam.

Authors:  Edward J Basom; Bryce A Manifold; Megan C Thielges
Journal:  Biochemistry       Date:  2017-06-14       Impact factor: 3.162

4.  Solvent-Independent Anharmonicity for Carbonyl Oscillators.

Authors:  Samuel H Schneider; Huong T Kratochvil; Martin T Zanni; Steven G Boxer
Journal:  J Phys Chem B       Date:  2017-03-08       Impact factor: 2.991

5.  Origin of thiocyanate spectral shifts in water and organic solvents.

Authors:  Ruoqi Zhao; Joseph C Shirley; Euihyun Lee; Adam Grofe; Hui Li; Carlos R Baiz; Jiali Gao
Journal:  J Chem Phys       Date:  2022-03-14       Impact factor: 3.488

6.  Vibrational Stark Effects of Carbonyl Probes Applied to Reinterpret IR and Raman Data for Enzyme Inhibitors in Terms of Electric Fields at the Active Site.

Authors:  Samuel H Schneider; Steven G Boxer
Journal:  J Phys Chem B       Date:  2016-08-31       Impact factor: 2.991

7.  Conformational Ensembles of Calmodulin Revealed by Nonperturbing Site-Specific Vibrational Probe Groups.

Authors:  Kristen L Kelly; Shannon R Dalton; Rebecca B Wai; Kanika Ramchandani; Rosalind J Xu; Sara Linse; Casey H Londergan
Journal:  J Phys Chem A       Date:  2018-03-09       Impact factor: 2.781

8.  Cyanylated Cysteine Reports Site-Specific Changes at Protein-Protein-Binding Interfaces Without Perturbation.

Authors:  Shannon R Dalton; Alice R Vienneau; Shana R Burstein; Rosalind J Xu; Sara Linse; Casey H Londergan
Journal:  Biochemistry       Date:  2018-06-05       Impact factor: 3.162

Review 9.  The mutual interactions of RNA, counterions and water - quantifying the electrostatics at the phosphate-water interface.

Authors:  Benjamin Philipp Fingerhut
Journal:  Chem Commun (Camb)       Date:  2021-12-03       Impact factor: 6.222

  9 in total

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