| Literature DB >> 24765045 |
Mehmet Akkurt1, Shaaban K Mohamed2, Joel T Mague3, Alaa A Hassan4, Mustafa R Albayati5.
Abstract
In the title compound, C14H19N3S, the seven-membered cyclo-heptane ring adopts a chair conformation. An intra-molecular N-H⋯N hydrogen bond [graph-set motif S(5)] is present in the N-N-C-N chain between the ring systems. An intra-molecular C-H⋯S contact also occurs. In the crystal, pairs of mol-ecules form centrosymmetric dimers through N-H⋯S hydrogen bonds [graph-set R 2 (2)(8)]. These dimers are connected by C-H⋯S inter-actions with an R 2 (2)(14) motif.Entities:
Year: 2014 PMID: 24765045 PMCID: PMC3998488 DOI: 10.1107/S1600536814003948
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H19N3S | |
| Monoclinic, | Cu |
| Hall symbol: -C 2yc | Cell parameters from 8726 reflections |
| θ = 4.4–72.4° | |
| µ = 1.97 mm−1 | |
| β = 113.219 (2)° | Parallelepiped, colourless |
| 0.20 × 0.08 × 0.04 mm | |
| Bruker D8 VENTURE PHOTON 100 CMOS diffractometer | 2693 independent reflections |
| Radiation source: INCOATEC IµS micro–focus source | 2460 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4167 pixels mm-1 | θmax = 72.4°, θmin = 4.4° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 11263 measured reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2693 reflections | Δρmax = 0.24 e Å−3 |
| 171 parameters | Δρmin = −0.24 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| S1 | 0.17859 (2) | 0.78279 (5) | 0.04498 (2) | 0.0211 (1) | |
| N1 | 0.11142 (5) | 0.39799 (19) | 0.02178 (5) | 0.0198 (3) | |
| N2 | 0.17477 (5) | 0.46222 (18) | −0.03562 (5) | 0.0198 (3) | |
| N3 | 0.15155 (5) | 0.26265 (17) | −0.06567 (5) | 0.0194 (3) | |
| C1 | 0.07507 (6) | 0.4095 (2) | 0.06186 (6) | 0.0184 (3) | |
| C2 | 0.07037 (6) | 0.5909 (2) | 0.09770 (6) | 0.0238 (4) | |
| C3 | 0.03058 (6) | 0.5801 (2) | 0.13315 (7) | 0.0255 (4) | |
| C4 | −0.00440 (6) | 0.3922 (2) | 0.13341 (6) | 0.0246 (4) | |
| C5 | 0.00110 (7) | 0.2115 (2) | 0.09818 (7) | 0.0260 (4) | |
| C6 | 0.04086 (6) | 0.2191 (2) | 0.06301 (6) | 0.0226 (4) | |
| C7 | 0.15252 (6) | 0.5377 (2) | 0.01003 (6) | 0.0187 (3) | |
| C8 | 0.17441 (6) | 0.1871 (2) | −0.10668 (6) | 0.0186 (3) | |
| C9 | 0.22606 (6) | 0.3024 (2) | −0.12320 (6) | 0.0201 (3) | |
| C10 | 0.24745 (6) | 0.1938 (2) | −0.17382 (6) | 0.0221 (4) | |
| C11 | 0.19353 (7) | 0.1805 (2) | −0.24352 (6) | 0.0254 (4) | |
| C12 | 0.14582 (7) | −0.0109 (2) | −0.25458 (6) | 0.0261 (4) | |
| C13 | 0.10499 (6) | −0.0088 (2) | −0.21264 (6) | 0.0259 (4) | |
| C14 | 0.14621 (6) | −0.0277 (2) | −0.13788 (6) | 0.0217 (4) | |
| H1N | 0.1062 (8) | 0.280 (3) | −0.0007 (8) | 0.023 (4)* | |
| H2 | 0.09410 | 0.72090 | 0.09800 | 0.0290* | |
| H2N | 0.2057 (8) | 0.535 (3) | −0.0405 (8) | 0.025 (4)* | |
| H3 | 0.02730 | 0.70410 | 0.15770 | 0.0310* | |
| H4 | −0.03180 | 0.38760 | 0.15740 | 0.0300* | |
| H5 | −0.02250 | 0.08150 | 0.09810 | 0.0310* | |
| H6 | 0.04480 | 0.09350 | 0.03950 | 0.0270* | |
| H9A | 0.26550 | 0.32090 | −0.08190 | 0.0240* | |
| H9B | 0.20950 | 0.45070 | −0.13950 | 0.0240* | |
| H10A | 0.26290 | 0.04360 | −0.15860 | 0.0270* | |
| H10B | 0.28510 | 0.27640 | −0.17570 | 0.0270* | |
| H11A | 0.16810 | 0.31870 | −0.25300 | 0.0300* | |
| H11B | 0.21460 | 0.16830 | −0.27540 | 0.0300* | |
| H12A | 0.11540 | −0.01210 | −0.30160 | 0.0310* | |
| H12B | 0.17130 | −0.14880 | −0.24570 | 0.0310* | |
| H13A | 0.07340 | −0.13190 | −0.22650 | 0.0310* | |
| H13B | 0.07930 | 0.12880 | −0.22130 | 0.0310* | |
| H14A | 0.11820 | −0.08710 | −0.11620 | 0.0260* | |
| H14B | 0.18260 | −0.13250 | −0.13040 | 0.0260* |
| S1 | 0.0234 (2) | 0.0197 (2) | 0.0226 (2) | −0.0056 (1) | 0.0116 (1) | −0.0035 (1) |
| N1 | 0.0235 (5) | 0.0191 (6) | 0.0189 (5) | −0.0053 (4) | 0.0106 (4) | −0.0042 (4) |
| N2 | 0.0225 (5) | 0.0195 (6) | 0.0209 (5) | −0.0054 (4) | 0.0122 (4) | −0.0025 (4) |
| N3 | 0.0215 (5) | 0.0183 (5) | 0.0188 (5) | −0.0021 (4) | 0.0084 (4) | −0.0008 (4) |
| C1 | 0.0151 (5) | 0.0240 (7) | 0.0148 (5) | −0.0009 (5) | 0.0046 (4) | 0.0016 (5) |
| C2 | 0.0252 (6) | 0.0235 (7) | 0.0249 (6) | −0.0062 (5) | 0.0123 (5) | −0.0032 (5) |
| C3 | 0.0280 (7) | 0.0277 (7) | 0.0242 (6) | −0.0015 (6) | 0.0138 (6) | −0.0035 (5) |
| C4 | 0.0209 (6) | 0.0323 (8) | 0.0238 (6) | 0.0001 (5) | 0.0122 (5) | 0.0031 (6) |
| C5 | 0.0229 (6) | 0.0249 (7) | 0.0326 (7) | −0.0038 (5) | 0.0136 (6) | 0.0026 (6) |
| C6 | 0.0216 (6) | 0.0222 (7) | 0.0247 (6) | −0.0023 (5) | 0.0099 (5) | −0.0013 (5) |
| C7 | 0.0173 (6) | 0.0213 (6) | 0.0162 (5) | −0.0001 (5) | 0.0051 (5) | 0.0018 (5) |
| C8 | 0.0180 (6) | 0.0203 (6) | 0.0179 (6) | 0.0000 (5) | 0.0074 (5) | 0.0024 (5) |
| C9 | 0.0214 (6) | 0.0199 (6) | 0.0202 (6) | −0.0035 (5) | 0.0095 (5) | 0.0004 (5) |
| C10 | 0.0219 (6) | 0.0251 (7) | 0.0234 (6) | −0.0027 (5) | 0.0133 (5) | 0.0002 (5) |
| C11 | 0.0295 (7) | 0.0293 (7) | 0.0208 (6) | −0.0028 (6) | 0.0136 (5) | 0.0005 (5) |
| C12 | 0.0267 (6) | 0.0314 (8) | 0.0215 (6) | −0.0038 (6) | 0.0109 (5) | −0.0052 (6) |
| C13 | 0.0218 (6) | 0.0310 (7) | 0.0257 (7) | −0.0057 (5) | 0.0103 (5) | −0.0080 (6) |
| C14 | 0.0230 (6) | 0.0217 (7) | 0.0251 (6) | −0.0045 (5) | 0.0146 (5) | −0.0025 (5) |
| S1—C7 | 1.6788 (13) | C12—C13 | 1.528 (2) |
| N1—C1 | 1.4132 (18) | C13—C14 | 1.5437 (17) |
| N1—C7 | 1.3451 (18) | C2—H2 | 0.9500 |
| N2—N3 | 1.3861 (15) | C3—H3 | 0.9500 |
| N2—C7 | 1.3648 (17) | C4—H4 | 0.9500 |
| N3—C8 | 1.2846 (17) | C5—H5 | 0.9500 |
| N1—H1N | 0.857 (18) | C6—H6 | 0.9500 |
| N2—H2N | 0.858 (19) | C9—H9A | 0.9900 |
| C1—C6 | 1.3935 (18) | C9—H9B | 0.9900 |
| C1—C2 | 1.3891 (18) | C10—H10A | 0.9900 |
| C2—C3 | 1.392 (2) | C10—H10B | 0.9900 |
| C3—C4 | 1.3858 (18) | C11—H11A | 0.9900 |
| C4—C5 | 1.3830 (18) | C11—H11B | 0.9900 |
| C5—C6 | 1.385 (2) | C12—H12A | 0.9900 |
| C8—C14 | 1.4988 (17) | C12—H12B | 0.9900 |
| C8—C9 | 1.5051 (19) | C13—H13A | 0.9900 |
| C9—C10 | 1.5267 (18) | C13—H13B | 0.9900 |
| C10—C11 | 1.5334 (18) | C14—H14A | 0.9900 |
| C11—C12 | 1.529 (2) | C14—H14B | 0.9900 |
| C1—N1—C7 | 133.21 (11) | C6—C5—H5 | 120.00 |
| N3—N2—C7 | 118.48 (11) | C1—C6—H6 | 120.00 |
| N2—N3—C8 | 118.59 (11) | C5—C6—H6 | 120.00 |
| C7—N1—H1N | 111.7 (12) | C8—C9—H9A | 108.00 |
| C1—N1—H1N | 115.1 (12) | C8—C9—H9B | 108.00 |
| C7—N2—H2N | 117.1 (12) | C10—C9—H9A | 108.00 |
| N3—N2—H2N | 124.0 (12) | C10—C9—H9B | 108.00 |
| N1—C1—C2 | 125.84 (12) | H9A—C9—H9B | 107.00 |
| C2—C1—C6 | 119.47 (12) | C9—C10—H10A | 109.00 |
| N1—C1—C6 | 114.68 (11) | C9—C10—H10B | 109.00 |
| C1—C2—C3 | 119.26 (12) | C11—C10—H10A | 109.00 |
| C2—C3—C4 | 121.35 (12) | C11—C10—H10B | 109.00 |
| C3—C4—C5 | 119.04 (13) | H10A—C10—H10B | 108.00 |
| C4—C5—C6 | 120.32 (12) | C10—C11—H11A | 109.00 |
| C1—C6—C5 | 120.54 (12) | C10—C11—H11B | 109.00 |
| S1—C7—N2 | 118.81 (10) | C12—C11—H11A | 109.00 |
| N1—C7—N2 | 113.37 (11) | C12—C11—H11B | 109.00 |
| S1—C7—N1 | 127.82 (10) | H11A—C11—H11B | 108.00 |
| N3—C8—C9 | 123.42 (11) | C11—C12—H12A | 108.00 |
| N3—C8—C14 | 115.47 (12) | C11—C12—H12B | 108.00 |
| C9—C8—C14 | 121.12 (11) | C13—C12—H12A | 108.00 |
| C8—C9—C10 | 117.30 (10) | C13—C12—H12B | 108.00 |
| C9—C10—C11 | 114.48 (12) | H12A—C12—H12B | 107.00 |
| C10—C11—C12 | 114.59 (10) | C12—C13—H13A | 109.00 |
| C11—C12—C13 | 115.67 (11) | C12—C13—H13B | 109.00 |
| C12—C13—C14 | 113.95 (11) | C14—C13—H13A | 109.00 |
| C8—C14—C13 | 112.92 (10) | C14—C13—H13B | 109.00 |
| C1—C2—H2 | 120.00 | H13A—C13—H13B | 108.00 |
| C3—C2—H2 | 120.00 | C8—C14—H14A | 109.00 |
| C2—C3—H3 | 119.00 | C8—C14—H14B | 109.00 |
| C4—C3—H3 | 119.00 | C13—C14—H14A | 109.00 |
| C3—C4—H4 | 120.00 | C13—C14—H14B | 109.00 |
| C5—C4—H4 | 120.00 | H14A—C14—H14B | 108.00 |
| C4—C5—H5 | 120.00 | ||
| C7—N1—C1—C2 | 5.0 (2) | C1—C2—C3—C4 | 0.0 (2) |
| C7—N1—C1—C6 | −176.19 (13) | C2—C3—C4—C5 | 0.7 (2) |
| C1—N1—C7—S1 | 3.8 (2) | C3—C4—C5—C6 | −0.2 (2) |
| C1—N1—C7—N2 | −176.94 (12) | C4—C5—C6—C1 | −0.9 (2) |
| C7—N2—N3—C8 | −177.23 (12) | N3—C8—C9—C10 | −178.99 (12) |
| N3—N2—C7—S1 | −178.15 (9) | C14—C8—C9—C10 | 1.11 (17) |
| N3—N2—C7—N1 | 2.53 (16) | N3—C8—C14—C13 | 113.26 (13) |
| N2—N3—C8—C14 | −179.13 (10) | C9—C8—C14—C13 | −66.84 (16) |
| N2—N3—C8—C9 | 0.97 (18) | C8—C9—C10—C11 | 65.39 (14) |
| N1—C1—C2—C3 | 177.64 (12) | C9—C10—C11—C12 | −81.85 (14) |
| C2—C1—C6—C5 | 1.6 (2) | C10—C11—C12—C13 | 62.65 (16) |
| C6—C1—C2—C3 | −1.15 (19) | C11—C12—C13—C14 | −63.37 (14) |
| N1—C1—C6—C5 | −177.31 (12) | C12—C13—C14—C8 | 82.43 (14) |
| H··· | ||||
| N1—H1 | 0.857 (18) | 2.052 (18) | 2.5599 (16) | 117.2 (16) |
| N2—H2 | 0.858 (19) | 2.830 (19) | 3.6790 (13) | 170.5 (15) |
| C2—H2···S1 | 0.95 | 2.60 | 3.2660 (15) | 128 |
| C9—H9 | 0.99 | 2.69 | 3.3141 (13) | 121 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.857 (18) | 2.052 (18) | 2.5599 (16) | 117.2 (16) |
| N2—H2 | 0.858 (19) | 2.830 (19) | 3.6790 (13) | 170.5 (15) |
| C2—H2⋯S1 | 0.95 | 2.60 | 3.2660 (15) | 128 |
| C9—H9 | 0.99 | 2.69 | 3.3141 (13) | 121 |
Symmetry code: (i) .