| Literature DB >> 24764985 |
Channappa N Kavitha1, Manpreet Kaur1, Brian J Anderson2, Jerry P Jasinski2, H S Yathirajan1.
Abstract
IN THE TITLE HYDRATED SALT [SYSTEMATIC NAME: 1-(1,3-benzodioxol-5-ylmeth-yl)piperazin-1-ium 4-nitro-benzoate monohydrate], C12H17N2O2 (+)·C7H4NO4 (-)·H2O, the piperazinium ring of the cation adopts a slightly distorted chair conformation. The piperonyl and piperazine rings are rotated with respect to each other with an N-C-C-C torsion angle of 45.6 (2)°. In the anion, the nitro group is almost coplanar with the adjacent benzene ring, forming a dihedral angle of only 3.9 (4)°. In the crystal, the cations, anions and water mol-ecules are linked through N-H⋯O and O-H⋯O hydrogen bonds into chains along the a axis. In addition, weaker inter-molecular C-H⋯O inter-actions are also observed within the chains. The anions form centrosymmetric couples through π-stacking inter-actions, with an inter-centroid distance of 3.681 (4) Å between the benzene rings.Entities:
Year: 2014 PMID: 24764985 PMCID: PMC3998489 DOI: 10.1107/S160053681400261X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H17N2O2+·C7H4NO4−·H2O | |
| Triclinic, | |
| Cu | |
| Cell parameters from 2866 reflections | |
| θ = 3.3–72.4° | |
| α = 92.561 (7)° | µ = 0.90 mm−1 |
| β = 98.753 (7)° | |
| γ = 93.326 (7)° | Irregular, colourless |
| 0.42 × 0.36 × 0.24 mm |
| Agilent Xcalibur (Eos, Gemini) diffractometer | 3761 independent reflections |
| Radiation source: Enhance (Cu) X-ray Source | 3196 reflections with |
| Detector resolution: 16.0416 pixels mm-1 | |
| ω scans | θmax = 72.4°, θmin = 3.3° |
| Absorption correction: multi-scan ( | |
| 6403 measured reflections |
| Refinement on | Hydrogen site location: mixed |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.27 e Å−3 | |
| 3761 reflections | Δρmin = −0.20 e Å−3 |
| 263 parameters | Extinction correction: |
| 0 restraints | Extinction coefficient: 0.0049 (6) |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| O1A | 0.5807 (2) | 0.15502 (11) | 0.58196 (11) | 0.0590 (4) | |
| O2A | 0.5429 (2) | 0.34467 (10) | 0.59022 (10) | 0.0501 (3) | |
| N1A | −0.1474 (2) | 0.41016 (10) | 0.31368 (9) | 0.0318 (3) | |
| N2A | −0.1698 (2) | 0.54167 (10) | 0.14110 (9) | 0.0332 (3) | |
| H2AA | −0.2433 | 0.4918 | 0.0891 | 0.040* | |
| H2AB | −0.1248 | 0.6053 | 0.1115 | 0.040* | |
| C1A | −0.1964 (3) | 0.31162 (14) | 0.36785 (13) | 0.0403 (4) | |
| H1AA | −0.2762 | 0.2532 | 0.3195 | 0.048* | |
| H1AB | −0.2965 | 0.3308 | 0.4166 | 0.048* | |
| C2A | 0.0109 (3) | 0.26602 (13) | 0.42328 (11) | 0.0369 (3) | |
| C3A | 0.0366 (3) | 0.15269 (14) | 0.41979 (13) | 0.0446 (4) | |
| H3A | −0.0772 | 0.1047 | 0.3811 | 0.054* | |
| C4A | 0.2234 (3) | 0.10638 (14) | 0.47100 (14) | 0.0500 (4) | |
| H4A | 0.2393 | 0.0285 | 0.4678 | 0.060* | |
| C5A | 0.3822 (3) | 0.17849 (14) | 0.52603 (12) | 0.0426 (4) | |
| C6A | 0.6796 (3) | 0.25825 (15) | 0.62731 (13) | 0.0466 (4) | |
| H6AA | 0.8318 | 0.2712 | 0.6106 | 0.056* | |
| H6AB | 0.6907 | 0.2575 | 0.7013 | 0.056* | |
| C7A | 0.3587 (3) | 0.29153 (13) | 0.53067 (11) | 0.0375 (3) | |
| C8A | 0.1769 (3) | 0.33840 (13) | 0.48093 (12) | 0.0378 (3) | |
| H8A | 0.1632 | 0.4165 | 0.4851 | 0.045* | |
| C9A | −0.3555 (2) | 0.45704 (13) | 0.27135 (11) | 0.0337 (3) | |
| H9AA | −0.4451 | 0.4722 | 0.3254 | 0.040* | |
| H9AB | −0.4436 | 0.4028 | 0.2212 | 0.040* | |
| C10A | −0.3064 (3) | 0.56353 (13) | 0.22182 (12) | 0.0353 (3) | |
| H10A | −0.4481 | 0.5943 | 0.1927 | 0.042* | |
| H10B | −0.2245 | 0.6190 | 0.2726 | 0.042* | |
| C11A | 0.0375 (2) | 0.48756 (13) | 0.18124 (12) | 0.0349 (3) | |
| H11A | 0.1350 | 0.5397 | 0.2300 | 0.042* | |
| H11B | 0.1200 | 0.4685 | 0.1256 | 0.042* | |
| C12A | −0.0217 (3) | 0.38327 (12) | 0.23225 (11) | 0.0336 (3) | |
| H12A | −0.1124 | 0.3295 | 0.1826 | 0.040* | |
| H12B | 0.1165 | 0.3483 | 0.2598 | 0.040* | |
| O1B | 1.02663 (19) | 0.27812 (9) | −0.04752 (9) | 0.0437 (3) | |
| O2B | 1.3475 (2) | 0.26959 (12) | 0.05605 (11) | 0.0591 (4) | |
| O3B | 0.8956 (2) | −0.16582 (12) | 0.28622 (10) | 0.0616 (4) | |
| O4B | 0.5845 (2) | −0.15818 (12) | 0.18715 (11) | 0.0595 (4) | |
| N1B | 0.7773 (2) | −0.12428 (11) | 0.21838 (10) | 0.0409 (3) | |
| C1B | 1.0487 (2) | 0.14427 (11) | 0.07692 (11) | 0.0301 (3) | |
| C2B | 1.1819 (2) | 0.09318 (13) | 0.15270 (12) | 0.0357 (3) | |
| H2B | 1.3335 | 0.1195 | 0.1723 | 0.043* | |
| C3B | 1.0959 (3) | 0.00431 (13) | 0.19982 (12) | 0.0369 (3) | |
| H3B | 1.1868 | −0.0319 | 0.2505 | 0.044* | |
| C4B | 0.8739 (2) | −0.02983 (12) | 0.17066 (11) | 0.0319 (3) | |
| C5B | 0.7362 (2) | 0.02062 (12) | 0.09760 (11) | 0.0329 (3) | |
| H5B | 0.5832 | −0.0040 | 0.0803 | 0.039* | |
| C6B | 0.8256 (2) | 0.10799 (12) | 0.04996 (11) | 0.0329 (3) | |
| H6B | 0.7341 | 0.1431 | −0.0013 | 0.039* | |
| C7B | 1.1503 (3) | 0.23837 (12) | 0.02427 (12) | 0.0355 (3) | |
| O1W | 0.34602 (17) | 0.60766 (9) | 0.01811 (8) | 0.0378 (3) | |
| H1WA | 0.4609 | 0.6478 | −0.0004 | 0.057* | |
| H1WB | 0.2443 | 0.6571 | 0.0317 | 0.057* |
| O1A | 0.0637 (8) | 0.0486 (8) | 0.0625 (8) | 0.0261 (6) | −0.0051 (7) | −0.0006 (6) |
| O2A | 0.0471 (7) | 0.0435 (7) | 0.0574 (8) | 0.0115 (5) | −0.0010 (6) | −0.0032 (6) |
| N1A | 0.0333 (6) | 0.0342 (6) | 0.0301 (6) | 0.0046 (5) | 0.0096 (5) | 0.0081 (5) |
| N2A | 0.0372 (7) | 0.0298 (6) | 0.0332 (6) | −0.0004 (5) | 0.0060 (5) | 0.0086 (5) |
| C1A | 0.0417 (8) | 0.0422 (9) | 0.0399 (8) | 0.0020 (7) | 0.0123 (7) | 0.0149 (7) |
| C2A | 0.0452 (9) | 0.0383 (8) | 0.0305 (7) | 0.0060 (7) | 0.0124 (6) | 0.0105 (6) |
| C3A | 0.0591 (10) | 0.0377 (9) | 0.0374 (8) | 0.0035 (7) | 0.0081 (7) | 0.0026 (7) |
| C4A | 0.0716 (12) | 0.0331 (8) | 0.0468 (10) | 0.0140 (8) | 0.0095 (9) | 0.0039 (7) |
| C5A | 0.0532 (10) | 0.0405 (9) | 0.0366 (8) | 0.0172 (7) | 0.0085 (7) | 0.0059 (7) |
| C6A | 0.0491 (10) | 0.0522 (10) | 0.0404 (9) | 0.0139 (8) | 0.0073 (7) | 0.0065 (8) |
| C7A | 0.0456 (9) | 0.0368 (8) | 0.0326 (8) | 0.0072 (7) | 0.0123 (6) | 0.0029 (6) |
| C8A | 0.0468 (9) | 0.0317 (8) | 0.0384 (8) | 0.0078 (6) | 0.0138 (7) | 0.0081 (6) |
| C9A | 0.0312 (7) | 0.0382 (8) | 0.0332 (7) | 0.0041 (6) | 0.0081 (6) | 0.0055 (6) |
| C10A | 0.0354 (7) | 0.0349 (8) | 0.0368 (8) | 0.0078 (6) | 0.0065 (6) | 0.0053 (6) |
| C11A | 0.0315 (7) | 0.0378 (8) | 0.0375 (8) | 0.0017 (6) | 0.0105 (6) | 0.0094 (6) |
| C12A | 0.0374 (8) | 0.0328 (7) | 0.0335 (7) | 0.0074 (6) | 0.0114 (6) | 0.0067 (6) |
| O1B | 0.0434 (6) | 0.0370 (6) | 0.0553 (7) | 0.0035 (5) | 0.0167 (5) | 0.0182 (5) |
| O2B | 0.0420 (7) | 0.0654 (9) | 0.0692 (9) | −0.0174 (6) | 0.0100 (6) | 0.0172 (7) |
| O3B | 0.0658 (9) | 0.0635 (9) | 0.0555 (8) | 0.0021 (7) | 0.0009 (7) | 0.0353 (7) |
| O4B | 0.0504 (7) | 0.0568 (8) | 0.0712 (9) | −0.0115 (6) | 0.0075 (7) | 0.0281 (7) |
| N1B | 0.0471 (8) | 0.0380 (7) | 0.0393 (7) | 0.0017 (6) | 0.0096 (6) | 0.0128 (6) |
| C1B | 0.0330 (7) | 0.0255 (7) | 0.0334 (7) | 0.0031 (5) | 0.0107 (6) | −0.0002 (6) |
| C2B | 0.0300 (7) | 0.0373 (8) | 0.0395 (8) | 0.0008 (6) | 0.0050 (6) | 0.0015 (6) |
| C3B | 0.0381 (8) | 0.0400 (8) | 0.0327 (8) | 0.0077 (6) | 0.0022 (6) | 0.0080 (6) |
| C4B | 0.0390 (8) | 0.0286 (7) | 0.0299 (7) | 0.0032 (6) | 0.0092 (6) | 0.0056 (6) |
| C5B | 0.0302 (7) | 0.0327 (7) | 0.0350 (8) | −0.0017 (6) | 0.0032 (6) | 0.0062 (6) |
| C6B | 0.0338 (7) | 0.0309 (7) | 0.0338 (7) | 0.0033 (6) | 0.0027 (6) | 0.0068 (6) |
| C7B | 0.0367 (8) | 0.0295 (7) | 0.0436 (9) | 0.0019 (6) | 0.0170 (7) | 0.0028 (6) |
| O1W | 0.0347 (5) | 0.0365 (6) | 0.0422 (6) | −0.0020 (4) | 0.0061 (5) | 0.0073 (5) |
| O1A—C5A | 1.373 (2) | C9A—C10A | 1.509 (2) |
| O1A—C6A | 1.421 (2) | C10A—H10A | 0.9900 |
| O2A—C6A | 1.431 (2) | C10A—H10B | 0.9900 |
| O2A—C7A | 1.3802 (19) | C11A—H11A | 0.9900 |
| N1A—C1A | 1.4619 (19) | C11A—H11B | 0.9900 |
| N1A—C9A | 1.4617 (18) | C11A—C12A | 1.511 (2) |
| N1A—C12A | 1.4648 (18) | C12A—H12A | 0.9900 |
| N2A—H2AA | 0.9422 | C12A—H12B | 0.9900 |
| N2A—H2AB | 0.9268 | O1B—C7B | 1.2622 (19) |
| N2A—C10A | 1.4888 (19) | O2B—C7B | 1.2400 (19) |
| N2A—C11A | 1.4913 (18) | O3B—N1B | 1.2192 (18) |
| C1A—H1AA | 0.9900 | O4B—N1B | 1.2231 (18) |
| C1A—H1AB | 0.9900 | N1B—C4B | 1.4693 (19) |
| C1A—C2A | 1.509 (2) | C1B—C2B | 1.393 (2) |
| C2A—C3A | 1.384 (2) | C1B—C6B | 1.388 (2) |
| C2A—C8A | 1.408 (2) | C1B—C7B | 1.516 (2) |
| C3A—H3A | 0.9500 | C2B—H2B | 0.9500 |
| C3A—C4A | 1.395 (2) | C2B—C3B | 1.387 (2) |
| C4A—H4A | 0.9500 | C3B—H3B | 0.9500 |
| C4A—C5A | 1.366 (3) | C3B—C4B | 1.379 (2) |
| C5A—C7A | 1.379 (2) | C4B—C5B | 1.379 (2) |
| C6A—H6AA | 0.9900 | C5B—H5B | 0.9500 |
| C6A—H6AB | 0.9900 | C5B—C6B | 1.385 (2) |
| C7A—C8A | 1.367 (2) | C6B—H6B | 0.9500 |
| C8A—H8A | 0.9500 | O1W—H1WA | 0.8987 |
| C9A—H9AA | 0.9900 | O1W—H1WB | 0.9158 |
| C9A—H9AB | 0.9900 | ||
| C5A—O1A—C6A | 106.07 (13) | C10A—C9A—H9AA | 109.6 |
| C7A—O2A—C6A | 105.74 (13) | C10A—C9A—H9AB | 109.6 |
| C1A—N1A—C12A | 111.33 (12) | N2A—C10A—C9A | 109.95 (12) |
| C9A—N1A—C1A | 109.81 (12) | N2A—C10A—H10A | 109.7 |
| C9A—N1A—C12A | 108.99 (11) | N2A—C10A—H10B | 109.7 |
| H2AA—N2A—H2AB | 107.3 | C9A—C10A—H10A | 109.7 |
| C10A—N2A—H2AA | 113.1 | C9A—C10A—H10B | 109.7 |
| C10A—N2A—H2AB | 113.7 | H10A—C10A—H10B | 108.2 |
| C10A—N2A—C11A | 110.93 (11) | N2A—C11A—H11A | 109.7 |
| C11A—N2A—H2AA | 104.7 | N2A—C11A—H11B | 109.7 |
| C11A—N2A—H2AB | 106.6 | N2A—C11A—C12A | 109.91 (12) |
| N1A—C1A—H1AA | 109.0 | H11A—C11A—H11B | 108.2 |
| N1A—C1A—H1AB | 109.0 | C12A—C11A—H11A | 109.7 |
| N1A—C1A—C2A | 112.76 (13) | C12A—C11A—H11B | 109.7 |
| H1AA—C1A—H1AB | 107.8 | N1A—C12A—C11A | 110.19 (12) |
| C2A—C1A—H1AA | 109.0 | N1A—C12A—H12A | 109.6 |
| C2A—C1A—H1AB | 109.0 | N1A—C12A—H12B | 109.6 |
| C3A—C2A—C1A | 120.29 (15) | C11A—C12A—H12A | 109.6 |
| C3A—C2A—C8A | 119.60 (15) | C11A—C12A—H12B | 109.6 |
| C8A—C2A—C1A | 120.09 (14) | H12A—C12A—H12B | 108.1 |
| C2A—C3A—H3A | 118.8 | O3B—N1B—O4B | 123.48 (14) |
| C2A—C3A—C4A | 122.45 (17) | O3B—N1B—C4B | 117.98 (14) |
| C4A—C3A—H3A | 118.8 | O4B—N1B—C4B | 118.52 (13) |
| C3A—C4A—H4A | 121.6 | C2B—C1B—C7B | 119.39 (13) |
| C5A—C4A—C3A | 116.74 (16) | C6B—C1B—C2B | 119.79 (14) |
| C5A—C4A—H4A | 121.6 | C6B—C1B—C7B | 120.82 (13) |
| O1A—C5A—C7A | 110.07 (15) | C1B—C2B—H2B | 119.6 |
| C4A—C5A—O1A | 128.41 (16) | C3B—C2B—C1B | 120.75 (14) |
| C4A—C5A—C7A | 121.52 (16) | C3B—C2B—H2B | 119.6 |
| O1A—C6A—O2A | 108.35 (14) | C2B—C3B—H3B | 121.1 |
| O1A—C6A—H6AA | 110.0 | C4B—C3B—C2B | 117.81 (14) |
| O1A—C6A—H6AB | 110.0 | C4B—C3B—H3B | 121.1 |
| O2A—C6A—H6AA | 110.0 | C3B—C4B—N1B | 119.33 (13) |
| O2A—C6A—H6AB | 110.0 | C3B—C4B—C5B | 122.89 (14) |
| H6AA—C6A—H6AB | 108.4 | C5B—C4B—N1B | 117.78 (13) |
| C5A—C7A—O2A | 109.55 (14) | C4B—C5B—H5B | 120.7 |
| C8A—C7A—O2A | 127.90 (14) | C4B—C5B—C6B | 118.61 (13) |
| C8A—C7A—C5A | 122.54 (15) | C6B—C5B—H5B | 120.7 |
| C2A—C8A—H8A | 121.4 | C1B—C6B—H6B | 119.9 |
| C7A—C8A—C2A | 117.14 (14) | C5B—C6B—C1B | 120.13 (13) |
| C7A—C8A—H8A | 121.4 | C5B—C6B—H6B | 119.9 |
| N1A—C9A—H9AA | 109.6 | O1B—C7B—C1B | 117.18 (13) |
| N1A—C9A—H9AB | 109.6 | O2B—C7B—O1B | 125.94 (15) |
| N1A—C9A—C10A | 110.19 (12) | O2B—C7B—C1B | 116.88 (14) |
| H9AA—C9A—H9AB | 108.1 | H1WA—O1W—H1WB | 106.6 |
| O1A—C5A—C7A—O2A | 0.01 (19) | C9A—N1A—C1A—C2A | −173.67 (12) |
| O1A—C5A—C7A—C8A | 179.33 (15) | C9A—N1A—C12A—C11A | 61.80 (15) |
| O2A—C7A—C8A—C2A | 179.03 (14) | C10A—N2A—C11A—C12A | 55.02 (16) |
| N1A—C1A—C2A—C3A | −135.98 (16) | C11A—N2A—C10A—C9A | −55.19 (16) |
| N1A—C1A—C2A—C8A | 45.6 (2) | C12A—N1A—C1A—C2A | 65.54 (16) |
| N1A—C9A—C10A—N2A | 58.74 (16) | C12A—N1A—C9A—C10A | −61.96 (15) |
| N2A—C11A—C12A—N1A | −58.34 (16) | O3B—N1B—C4B—C3B | 3.6 (2) |
| C1A—N1A—C9A—C10A | 175.85 (12) | O3B—N1B—C4B—C5B | −176.66 (15) |
| C1A—N1A—C12A—C11A | −176.93 (12) | O4B—N1B—C4B—C3B | −175.27 (15) |
| C1A—C2A—C3A—C4A | −178.95 (15) | O4B—N1B—C4B—C5B | 4.5 (2) |
| C1A—C2A—C8A—C7A | 178.88 (13) | N1B—C4B—C5B—C6B | −178.38 (13) |
| C2A—C3A—C4A—C5A | 0.3 (3) | C1B—C2B—C3B—C4B | −1.4 (2) |
| C3A—C2A—C8A—C7A | 0.5 (2) | C2B—C1B—C6B—C5B | −0.6 (2) |
| C3A—C4A—C5A—O1A | −179.27 (16) | C2B—C1B—C7B—O1B | 176.26 (13) |
| C3A—C4A—C5A—C7A | 0.0 (3) | C2B—C1B—C7B—O2B | −4.0 (2) |
| C4A—C5A—C7A—O2A | −179.42 (16) | C2B—C3B—C4B—N1B | 179.53 (13) |
| C4A—C5A—C7A—C8A | −0.1 (3) | C2B—C3B—C4B—C5B | −0.2 (2) |
| C5A—O1A—C6A—O2A | −4.64 (19) | C3B—C4B—C5B—C6B | 1.3 (2) |
| C5A—C7A—C8A—C2A | −0.2 (2) | C4B—C5B—C6B—C1B | −0.9 (2) |
| C6A—O1A—C5A—C4A | −177.74 (18) | C6B—C1B—C2B—C3B | 1.8 (2) |
| C6A—O1A—C5A—C7A | 2.89 (19) | C6B—C1B—C7B—O1B | −3.2 (2) |
| C6A—O2A—C7A—C5A | −2.88 (18) | C6B—C1B—C7B—O2B | 176.51 (14) |
| C6A—O2A—C7A—C8A | 177.85 (16) | C7B—C1B—C2B—C3B | −177.71 (13) |
| C7A—O2A—C6A—O1A | 4.63 (19) | C7B—C1B—C6B—C5B | 178.89 (13) |
| C8A—C2A—C3A—C4A | −0.5 (3) |
| H··· | ||||
| N2 | 0.94 | 1.84 | 2.7800 (16) | 172 |
| N2 | 0.93 | 1.80 | 2.7262 (16) | 175 |
| C9 | 0.99 | 2.58 | 3.3260 (19) | 132 |
| C10 | 0.99 | 2.51 | 3.2833 (19) | 135 |
| O1 | 0.90 | 1.76 | 2.6526 (16) | 170 |
| O1 | 0.92 | 1.90 | 2.7867 (16) | 163 |
Hydrogen-bond geometry (Å, °)
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| H⋯ |
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|
|---|---|---|---|---|
| N2 | 0.94 | 1.84 | 2.7800 (16) | 172 |
| N2 | 0.93 | 1.80 | 2.7262 (16) | 175 |
| C9 | 0.99 | 2.58 | 3.3260 (19) | 132 |
| C10 | 0.99 | 2.51 | 3.2833 (19) | 135 |
| O1 | 0.90 | 1.76 | 2.6526 (16) | 170 |
| O1 | 0.92 | 1.90 | 2.7867 (16) | 163 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .