Literature DB >> 24764971

Cyclo-hexyl-ammonium nitrate.

Abdulaziz A Bagabas1, Mohamed F A Aboud2, Ahsan M Shemsi3, Emad S Addurihem1, Zeid A Al-Othman4, C S Chidan Kumar5, Hoong-Kun Fun6.   

Abstract

In the title salt, C6H14N(+)·NO3 (-), the cyclo-hexyl ring adopts a chair conformation. The ammonium group occupies an equatorial position and the crystal struture is stabilized by inter-molecular N-H⋯O hydrogen-bonding inter-actions, resulting in a three-dimensional network.

Entities:  

Year:  2014        PMID: 24764971      PMCID: PMC3998418          DOI: 10.1107/S1600536814002244

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the Brønsted–Lowry basicity behavior of cyclo­hexyl­amine, see: Solomons (1996 ▶). For the preparation of salts of anions and complex anions with cyclo­hexyl primary ammonium cations, see: Jones et al. (1998 ▶); Kolev et al. (2007 ▶); Lock et al. (1981 ▶); Muthamizhchelvan et al. (2005 ▶); Wang et al. (2005 ▶); Yun et al. (2004 ▶). For precautions relating to the reaction of cyclo­hexyl­amine with strong acids or oxidizing agents, see: Chang (2008 ▶); Patnaik (2007 ▶). For the structures of other cyclo­hexyle­ammonium salts, see: Shimada et al. (1955 ▶); Smith et al. (1994 ▶); Odendal et al. (2010 ▶). For ring conformations and ring puckering analysis, see: Cremer & Pople (1975 ▶). For reference bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C6H14NNO3 M = 162.19 Monoclinic, a = 8.9322 (9) Å b = 9.9010 (9) Å c = 10.3951 (10) Å β = 103.866 (2)° V = 892.53 (15) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 294 K 0.39 × 0.15 × 0.14 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.964, T max = 0.987 2214 measured reflections 2214 independent reflections 1750 reflections with I > 2σ(I)

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.121 S = 1.09 2214 reflections 101 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.15 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814002244/sj5386sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814002244/sj5386Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814002244/sj5386Isup3.cml CCDC reference: Additional supporting information: crystallographic information; 3D view; checkCIF report
C6H14N+·NO3F(000) = 352
Mr = 162.19Dx = 1.207 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 11857 reflections
a = 8.9322 (9) Åθ = 2.4–28.3°
b = 9.9010 (9) ŵ = 0.10 mm1
c = 10.3951 (10) ÅT = 294 K
β = 103.866 (2)°Block, colorless
V = 892.53 (15) Å30.39 × 0.15 × 0.14 mm
Z = 4
Bruker APEXII CCD diffractometer2214 independent reflections
Radiation source: fine-focus sealed tube1750 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.000
φ and ω scansθmax = 28.3°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→11
Tmin = 0.964, Tmax = 0.987k = 0→13
2214 measured reflectionsl = 0→13
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H-atom parameters constrained
wR(F2) = 0.121w = 1/[σ2(Fo2) + (0.0584P)2 + 0.0786P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max = 0.005
2214 reflectionsΔρmax = 0.15 e Å3
101 parametersΔρmin = −0.15 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.042 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.94737 (12)0.24027 (11)0.84734 (10)0.0591 (3)
H11.00400.23960.93970.071*
H20.93340.15040.81650.071*
H31.00010.28180.80170.071*
C10.79115 (13)0.30167 (11)0.83331 (11)0.0504 (3)
H40.73120.24280.87790.060*
C20.80481 (15)0.43882 (13)0.89905 (13)0.0619 (3)
H50.87010.49670.86050.074*
H60.85230.42930.99280.074*
C30.64691 (18)0.50274 (15)0.88097 (18)0.0806 (4)
H70.65800.59270.91900.097*
H80.58550.44950.92760.097*
C40.56468 (19)0.51139 (15)0.7354 (2)0.0887 (5)
H90.46220.54820.72700.106*
H100.62080.57210.69060.106*
C50.55222 (17)0.37454 (16)0.67001 (17)0.0833 (5)
H110.50520.38420.57620.100*
H120.48640.31680.70810.100*
C60.70975 (16)0.30923 (13)0.68820 (12)0.0638 (3)
H130.69790.21890.65090.077*
H140.77160.36140.64120.077*
O10.90382 (12)0.78324 (9)0.87802 (9)0.0694 (3)
O20.82965 (10)0.96820 (10)0.95391 (9)0.0681 (3)
O30.87733 (12)0.96351 (10)0.75996 (9)0.0729 (3)
N20.86827 (10)0.90604 (10)0.86507 (9)0.0529 (3)
U11U22U33U12U13U23
N10.0641 (6)0.0561 (5)0.0586 (6)0.0105 (4)0.0177 (4)0.0154 (4)
C10.0543 (6)0.0449 (5)0.0521 (6)0.0010 (4)0.0129 (5)0.0065 (4)
C20.0651 (7)0.0546 (7)0.0635 (7)−0.0030 (5)0.0108 (6)−0.0057 (5)
C30.0777 (9)0.0615 (8)0.1048 (12)0.0089 (7)0.0265 (9)−0.0157 (8)
C40.0674 (8)0.0606 (8)0.1274 (15)0.0139 (7)0.0022 (9)0.0051 (8)
C50.0720 (8)0.0705 (9)0.0906 (10)0.0057 (7)−0.0135 (7)0.0017 (8)
C60.0754 (8)0.0569 (7)0.0535 (7)0.0052 (6)0.0041 (6)0.0008 (5)
O10.0868 (6)0.0492 (5)0.0696 (6)0.0075 (4)0.0139 (5)0.0001 (4)
O20.0688 (5)0.0736 (6)0.0650 (5)0.0105 (4)0.0221 (4)−0.0094 (4)
O30.0975 (7)0.0663 (6)0.0549 (5)0.0129 (5)0.0181 (5)0.0090 (4)
N20.0479 (5)0.0538 (5)0.0536 (5)0.0040 (4)0.0051 (4)−0.0018 (4)
N1—C11.4968 (15)C3—H80.9700
N1—H10.9724C4—C51.508 (2)
N1—H20.9440C4—H90.9700
N1—H30.8498C4—H100.9700
C1—C61.5112 (16)C5—C61.519 (2)
C1—C21.5119 (17)C5—H110.9700
C1—H40.9800C5—H120.9700
C2—C31.5159 (19)C6—H130.9700
C2—H50.9700C6—H140.9700
C2—H60.9700O1—N21.2556 (13)
C3—C41.518 (3)O2—N21.2261 (12)
C3—H70.9700O3—N21.2516 (13)
C1—N1—H1110.6H7—C3—H8108.0
C1—N1—H2107.8C5—C4—C3111.37 (13)
H1—N1—H2108.9C5—C4—H9109.4
C1—N1—H3112.2C3—C4—H9109.4
H1—N1—H3109.1C5—C4—H10109.4
H2—N1—H3108.2C3—C4—H10109.4
N1—C1—C6109.37 (10)H9—C4—H10108.0
N1—C1—C2110.38 (10)C4—C5—C6111.12 (12)
C6—C1—C2111.97 (10)C4—C5—H11109.4
N1—C1—H4108.3C6—C5—H11109.4
C6—C1—H4108.3C4—C5—H12109.4
C2—C1—H4108.3C6—C5—H12109.4
C1—C2—C3110.31 (11)H11—C5—H12108.0
C1—C2—H5109.6C1—C6—C5110.81 (12)
C3—C2—H5109.6C1—C6—H13109.5
C1—C2—H6109.6C5—C6—H13109.5
C3—C2—H6109.6C1—C6—H14109.5
H5—C2—H6108.1C5—C6—H14109.5
C2—C3—C4111.14 (13)H13—C6—H14108.1
C2—C3—H7109.4O2—N2—O3121.20 (10)
C4—C3—H7109.4O2—N2—O1120.99 (10)
C2—C3—H8109.4O3—N2—O1117.79 (10)
C4—C3—H8109.4
N1—C1—C2—C3178.21 (11)C3—C4—C5—C6−55.5 (2)
C6—C1—C2—C356.11 (15)N1—C1—C6—C5−178.51 (11)
C1—C2—C3—C4−55.73 (16)C2—C1—C6—C5−55.83 (15)
C2—C3—C4—C556.08 (19)C4—C5—C6—C155.08 (18)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.971.892.8553 (14)172
N1—H2···O3ii0.941.972.9074 (15)172
N1—H3···O1iii0.852.242.9880 (15)148
N1—H3···O3iii0.852.283.0689 (15)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O1i 0.971.892.8553 (14)172
N1—H2⋯O3ii 0.941.972.9074 (15)172
N1—H3⋯O1iii 0.852.242.9880 (15)148
N1—H3⋯O3iii 0.852.283.0689 (15)155

Symmetry codes: (i) ; (ii) ; (iii) .

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