| Literature DB >> 24764950 |
Ahlem Ben Saad1, Ahmed Selmi1, Mohamed Rzaigui1, Samah Toumi Akriche1.
Abstract
In the title compound, (C8H12N)2[Co(H2P2O7)2(H2O)2], the Co(2+) ion lies on a crystallographic inversion centre and adopts a slightly distorted octa-hedral CoO6 coordination geometry arising from two chelating diphosphate [H2P2O7](2-) ligands and two trans water mol-ecules. In the crystal, the components are linked by O-H⋯O, N-H⋯O and C-H⋯O hydrogen bonds and weak aromatic π-π stacking [shortest centroid-centroid separation = 3.778 (2) Å] inter-actions. (001) layers of alternating organic cations and complex inorganic anions are apparent.Entities:
Year: 2014 PMID: 24764950 PMCID: PMC3998415 DOI: 10.1107/S1600536814002530
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C8H12N)2[Co(H2P2O7)2(H2O)2] | |
| Triclinic, | |
| Ag | |
| Cell parameters from 25 reflections | |
| θ = 9–11° | |
| α = 85.35 (3)° | µ = 0.48 mm−1 |
| β = 75.56 (2)° | |
| γ = 74.42 (5)° | Prism, pink |
| 0.40 × 0.30 × 0.20 mm |
| Enraf–Nonius CAD-4 diffractometer | 5514 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 28.0°, θmin = 2.2° |
| non–profiled ω scans | |
| Absorption correction: ψ scan (North | |
| 9085 measured reflections | 2 standard reflections every 120 min |
| 6683 independent reflections | intensity decay: 5% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 6683 reflections | (Δ/σ)max = 0.005 |
| 189 parameters | Δρmax = 1.57 e Å−3 |
| 3 restraints | Δρmin = −0.82 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.5000 | 0.5000 | 0.5000 | 0.01796 (9) | |
| P1 | 0.69129 (7) | 0.72084 (7) | 0.63065 (4) | 0.01948 (10) | |
| P2 | 0.80524 (7) | 0.75466 (7) | 0.40670 (4) | 0.01867 (10) | |
| O1 | 0.5727 (2) | 0.5931 (2) | 0.62242 (13) | 0.0242 (3) | |
| O2 | 0.8322 (3) | 0.6463 (2) | 0.70245 (15) | 0.0287 (3) | |
| H2 | 0.8794 | 0.5361 | 0.6937 | 0.043* | |
| O3 | 0.5808 (3) | 0.9121 (2) | 0.66208 (16) | 0.0306 (4) | |
| O4 | 0.8430 (2) | 0.7284 (3) | 0.52092 (14) | 0.0274 (3) | |
| O5 | 0.6535 (2) | 0.6611 (2) | 0.40048 (13) | 0.0245 (3) | |
| O6 | 1.0029 (2) | 0.6880 (2) | 0.33643 (15) | 0.0281 (3) | |
| O7 | 0.7321 (3) | 0.9654 (2) | 0.39394 (17) | 0.0308 (4) | |
| H7 | 0.6270 | 0.9903 | 0.3778 | 0.046* | |
| O1W | 0.7487 (2) | 0.2730 (2) | 0.49181 (18) | 0.0327 (4) | |
| H1W1 | 0.748 (6) | 0.178 (4) | 0.462 (3) | 0.049* | |
| H2W1 | 0.865 (4) | 0.291 (5) | 0.477 (3) | 0.049* | |
| N1 | 0.3681 (3) | 0.7717 (3) | 0.26576 (15) | 0.0258 (3) | |
| H1A | 0.3675 | 0.8804 | 0.2865 | 0.039* | |
| H1B | 0.4577 | 0.6849 | 0.2885 | 0.039* | |
| H1C | 0.2511 | 0.7508 | 0.2908 | 0.039* | |
| C1 | 0.4143 (4) | 0.7700 (4) | 0.15241 (18) | 0.0291 (4) | |
| C2 | 0.2798 (5) | 0.8852 (4) | 0.1038 (2) | 0.0367 (5) | |
| C3 | 0.3238 (7) | 0.8820 (6) | −0.0032 (3) | 0.0530 (9) | |
| H3 | 0.2364 | 0.9570 | −0.0382 | 0.064* | |
| C4 | 0.4949 (8) | 0.7695 (7) | −0.0583 (2) | 0.0616 (12) | |
| H4 | 0.5210 | 0.7680 | −0.1298 | 0.074* | |
| C5 | 0.6260 (6) | 0.6602 (6) | −0.0078 (2) | 0.0540 (10) | |
| H5 | 0.7416 | 0.5865 | −0.0457 | 0.065* | |
| C6 | 0.5902 (5) | 0.6569 (4) | 0.0994 (2) | 0.0378 (6) | |
| C7 | 0.0963 (5) | 1.0126 (5) | 0.1621 (3) | 0.0477 (7) | |
| H7A | 0.0077 | 0.9431 | 0.1985 | 0.072* | |
| H7B | 0.0364 | 1.0961 | 0.1147 | 0.072* | |
| H7C | 0.1273 | 1.0802 | 0.2102 | 0.072* | |
| C8 | 0.7374 (5) | 0.5355 (6) | 0.1532 (3) | 0.0556 (9) | |
| H8A | 0.8042 | 0.6090 | 0.1783 | 0.083* | |
| H8B | 0.8302 | 0.4477 | 0.1057 | 0.083* | |
| H8C | 0.6715 | 0.4726 | 0.2100 | 0.083* |
| Co1 | 0.01549 (15) | 0.01757 (15) | 0.02352 (17) | −0.00720 (11) | −0.00640 (12) | −0.00003 (12) |
| P1 | 0.0174 (2) | 0.01835 (19) | 0.0248 (2) | −0.00437 (15) | −0.00820 (16) | −0.00249 (16) |
| P2 | 0.01319 (18) | 0.01767 (19) | 0.0260 (2) | −0.00567 (14) | −0.00438 (15) | −0.00018 (16) |
| O1 | 0.0256 (7) | 0.0265 (7) | 0.0252 (7) | −0.0133 (5) | −0.0071 (5) | −0.0016 (5) |
| O2 | 0.0286 (7) | 0.0271 (7) | 0.0330 (8) | −0.0007 (6) | −0.0171 (6) | −0.0051 (6) |
| O3 | 0.0286 (7) | 0.0206 (6) | 0.0450 (10) | −0.0003 (6) | −0.0174 (7) | −0.0082 (6) |
| O4 | 0.0206 (6) | 0.0389 (8) | 0.0276 (7) | −0.0137 (6) | −0.0087 (5) | 0.0010 (6) |
| O5 | 0.0236 (6) | 0.0279 (7) | 0.0279 (7) | −0.0154 (5) | −0.0083 (5) | 0.0032 (5) |
| O6 | 0.0176 (6) | 0.0248 (7) | 0.0369 (9) | −0.0044 (5) | 0.0010 (6) | 0.0012 (6) |
| O7 | 0.0235 (7) | 0.0185 (6) | 0.0539 (11) | −0.0040 (5) | −0.0166 (7) | −0.0014 (6) |
| O1W | 0.0191 (6) | 0.0259 (7) | 0.0549 (12) | −0.0031 (6) | −0.0118 (7) | −0.0099 (7) |
| N1 | 0.0265 (8) | 0.0297 (8) | 0.0232 (8) | −0.0104 (7) | −0.0062 (6) | 0.0003 (6) |
| C1 | 0.0362 (11) | 0.0345 (10) | 0.0227 (9) | −0.0204 (9) | −0.0061 (8) | 0.0002 (8) |
| C2 | 0.0475 (14) | 0.0433 (13) | 0.0310 (11) | −0.0272 (12) | −0.0166 (10) | 0.0089 (10) |
| C3 | 0.078 (3) | 0.068 (2) | 0.0340 (14) | −0.045 (2) | −0.0286 (16) | 0.0146 (14) |
| C4 | 0.099 (3) | 0.080 (3) | 0.0228 (12) | −0.057 (3) | −0.0082 (16) | 0.0011 (14) |
| C5 | 0.070 (2) | 0.065 (2) | 0.0286 (13) | −0.0376 (19) | 0.0110 (14) | −0.0132 (13) |
| C6 | 0.0413 (13) | 0.0433 (13) | 0.0295 (11) | −0.0205 (11) | 0.0030 (10) | −0.0084 (10) |
| C7 | 0.0455 (16) | 0.0484 (17) | 0.0554 (19) | −0.0149 (13) | −0.0249 (15) | 0.0147 (14) |
| C8 | 0.0376 (15) | 0.061 (2) | 0.057 (2) | −0.0017 (15) | 0.0009 (14) | −0.0131 (17) |
| Co1—O5i | 2.0645 (18) | N1—H1B | 0.8900 |
| Co1—O5 | 2.0645 (18) | N1—H1C | 0.8900 |
| Co1—O1 | 2.0744 (17) | C1—C2 | 1.386 (4) |
| Co1—O1i | 2.0744 (17) | C1—C6 | 1.396 (4) |
| Co1—O1Wi | 2.130 (2) | C2—C3 | 1.391 (4) |
| Co1—O1W | 2.130 (2) | C2—C7 | 1.500 (5) |
| P1—O1 | 1.4905 (17) | C3—C4 | 1.383 (7) |
| P1—O3 | 1.495 (2) | C3—H3 | 0.9300 |
| P1—O2 | 1.5505 (18) | C4—C5 | 1.369 (7) |
| P1—O4 | 1.6151 (19) | C4—H4 | 0.9300 |
| P2—O5 | 1.4910 (17) | C5—C6 | 1.395 (4) |
| P2—O6 | 1.4971 (18) | C5—H5 | 0.9300 |
| P2—O7 | 1.5529 (19) | C6—C8 | 1.509 (6) |
| P2—O4 | 1.6110 (19) | C7—H7A | 0.9600 |
| O2—H2 | 0.8200 | C7—H7B | 0.9600 |
| O7—H7 | 0.8200 | C7—H7C | 0.9600 |
| O1W—H1W1 | 0.856 (18) | C8—H8A | 0.9600 |
| O1W—H2W1 | 0.867 (18) | C8—H8B | 0.9600 |
| N1—C1 | 1.473 (3) | C8—H8C | 0.9600 |
| N1—H1A | 0.8900 | ||
| O5i—Co1—O5 | 180.0 | C1—N1—H1B | 109.5 |
| O5i—Co1—O1 | 90.34 (7) | H1A—N1—H1B | 109.5 |
| O5—Co1—O1 | 89.66 (7) | C1—N1—H1C | 109.5 |
| O5i—Co1—O1i | 89.66 (7) | H1A—N1—H1C | 109.5 |
| O5—Co1—O1i | 90.34 (7) | H1B—N1—H1C | 109.5 |
| O1—Co1—O1i | 180.0 | C2—C1—C6 | 123.4 (3) |
| O5i—Co1—O1Wi | 93.83 (8) | C2—C1—N1 | 117.4 (2) |
| O5—Co1—O1Wi | 86.17 (8) | C6—C1—N1 | 119.2 (2) |
| O1—Co1—O1Wi | 92.18 (8) | C1—C2—C3 | 117.1 (3) |
| O1i—Co1—O1Wi | 87.82 (8) | C1—C2—C7 | 122.5 (3) |
| O5i—Co1—O1W | 86.17 (8) | C3—C2—C7 | 120.4 (3) |
| O5—Co1—O1W | 93.83 (8) | C4—C3—C2 | 121.2 (4) |
| O1—Co1—O1W | 87.82 (8) | C4—C3—H3 | 119.4 |
| O1i—Co1—O1W | 92.18 (8) | C2—C3—H3 | 119.4 |
| O1Wi—Co1—O1W | 180.0 | C5—C4—C3 | 120.0 (3) |
| O1—P1—O3 | 116.44 (11) | C5—C4—H4 | 120.0 |
| O1—P1—O2 | 112.85 (11) | C3—C4—H4 | 120.0 |
| O3—P1—O2 | 107.98 (11) | C4—C5—C6 | 121.5 (4) |
| O1—P1—O4 | 108.32 (10) | C4—C5—H5 | 119.2 |
| O3—P1—O4 | 108.67 (12) | C6—C5—H5 | 119.2 |
| O2—P1—O4 | 101.45 (10) | C5—C6—C1 | 116.8 (3) |
| O5—P2—O6 | 116.77 (11) | C5—C6—C8 | 120.5 (3) |
| O5—P2—O7 | 111.33 (10) | C1—C6—C8 | 122.8 (3) |
| O6—P2—O7 | 109.58 (11) | C2—C7—H7A | 109.5 |
| O5—P2—O4 | 109.55 (9) | C2—C7—H7B | 109.5 |
| O6—P2—O4 | 104.85 (10) | H7A—C7—H7B | 109.5 |
| O7—P2—O4 | 103.77 (11) | C2—C7—H7C | 109.5 |
| P1—O1—Co1 | 133.68 (10) | H7A—C7—H7C | 109.5 |
| P1—O2—H2 | 109.5 | H7B—C7—H7C | 109.5 |
| P2—O4—P1 | 129.66 (11) | C6—C8—H8A | 109.5 |
| P2—O5—Co1 | 134.76 (11) | C6—C8—H8B | 109.5 |
| P2—O7—H7 | 109.5 | H8A—C8—H8B | 109.5 |
| Co1—O1W—H1W1 | 116 (3) | C6—C8—H8C | 109.5 |
| Co1—O1W—H2W1 | 120 (3) | H8A—C8—H8C | 109.5 |
| H1W1—O1W—H2W1 | 111 (3) | H8B—C8—H8C | 109.5 |
| C1—N1—H1A | 109.5 | ||
| O3—P1—O1—Co1 | 99.39 (16) | O1—Co1—O5—P2 | 17.64 (15) |
| O2—P1—O1—Co1 | −134.89 (14) | O1i—Co1—O5—P2 | −162.36 (15) |
| O4—P1—O1—Co1 | −23.38 (17) | O1Wi—Co1—O5—P2 | 109.84 (16) |
| O5i—Co1—O1—P1 | 178.85 (15) | O1W—Co1—O5—P2 | −70.16 (16) |
| O5—Co1—O1—P1 | −1.15 (15) | C6—C1—C2—C3 | 1.6 (4) |
| O1i—Co1—O1—P1 | 10 (100) | N1—C1—C2—C3 | −179.6 (2) |
| O1Wi—Co1—O1—P1 | −87.30 (15) | C6—C1—C2—C7 | −176.8 (3) |
| O1W—Co1—O1—P1 | 92.70 (15) | N1—C1—C2—C7 | 2.0 (4) |
| O5—P2—O4—P1 | −35.28 (19) | C1—C2—C3—C4 | −0.4 (5) |
| O6—P2—O4—P1 | −161.35 (15) | C7—C2—C3—C4 | 178.1 (3) |
| O7—P2—O4—P1 | 83.69 (17) | C2—C3—C4—C5 | −0.9 (6) |
| O1—P1—O4—P2 | 47.67 (18) | C3—C4—C5—C6 | 1.0 (6) |
| O3—P1—O4—P2 | −79.70 (17) | C4—C5—C6—C1 | 0.1 (5) |
| O2—P1—O4—P2 | 166.66 (15) | C4—C5—C6—C8 | −179.8 (4) |
| O6—P2—O5—Co1 | 114.85 (16) | C2—C1—C6—C5 | −1.5 (4) |
| O7—P2—O5—Co1 | −118.29 (16) | N1—C1—C6—C5 | 179.7 (2) |
| O4—P2—O5—Co1 | −4.09 (18) | C2—C1—C6—C8 | 178.5 (3) |
| O5i—Co1—O5—P2 | −89 (100) | N1—C1—C6—C8 | −0.3 (4) |
| H··· | ||||
| O2—H2···O6ii | 0.82 | 1.72 | 2.532 (3) | 174 |
| O7—H7···O3iii | 0.82 | 1.70 | 2.505 (3) | 167 |
| O1 | 0.87 (2) | 2.11 (2) | 2.947 (3) | 161 (4) |
| O1 | 0.86 (2) | 1.96 (2) | 2.813 (3) | 177 (4) |
| N1—H1 | 0.89 | 1.94 | 2.828 (3) | 175 |
| N1—H1 | 0.89 | 1.93 | 2.805 (3) | 168 |
| N1—H1 | 0.89 | 2.29 | 3.005 (3) | 138 |
| N1—H1 | 0.89 | 2.37 | 3.016 (3) | 129 |
| C7—H7 | 0.96 | 2.58 | 3.497 (5) | 160 |
| C7—H7 | 0.96 | 2.57 | 3.343 (4) | 138 |
Selected bond lengths (Å)
| Co1—O5 | 2.0645 (18) |
| Co1—O1 | 2.0744 (17) |
| Co1—O1 | 2.130 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O2—H2⋯O6i | 0.82 | 1.72 | 2.532 (3) | 174 |
| O7—H7⋯O3ii | 0.82 | 1.70 | 2.505 (3) | 167 |
| O1 | 0.87 (2) | 2.11 (2) | 2.947 (3) | 161 (4) |
| O1 | 0.86 (2) | 1.96 (2) | 2.813 (3) | 177 (4) |
| N1—H1 | 0.89 | 1.94 | 2.828 (3) | 175 |
| N1—H1 | 0.89 | 1.93 | 2.805 (3) | 168 |
| N1—H1 | 0.89 | 2.29 | 3.005 (3) | 138 |
| N1—H1 | 0.89 | 2.37 | 3.016 (3) | 129 |
| C7—H7 | 0.96 | 2.58 | 3.497 (5) | 160 |
| C7—H7 | 0.96 | 2.57 | 3.343 (4) | 138 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .