| Literature DB >> 24764928 |
Fatima-Zahrae Qachchachi1, Fouad Ouazzani Chahdi1, Houria Misbahi2, Michael Bodensteiner3, Lahcen El Ammari4.
Abstract
The structure of the title compound, C20H29NO2, is isotypic to that of its homologue 1-octylindoline-2,3-dione. The indoline ring and the two carbonyl-group O atoms are approximately coplanar, the largest deviation from the mean plane being 0.0760 (10) Å. The mean plane through the fused-ring system is nearly perpendicular to the mean plane passing through the 1-dodecyl chain [dihedral angle = 77.69 (5)°]. All C atoms of the dodecyl group are in an anti-periplanar arrangement. In the crystal, mol-ecules are linked by C-H⋯O hydrogen bonds, forming a three-dimensional network.Entities:
Year: 2014 PMID: 24764928 PMCID: PMC3998367 DOI: 10.1107/S1600536814001792
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H29NO2 | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 6237 reflections |
| θ = 5.4–73.8° | |
| µ = 0.58 mm−1 | |
| β = 104.926 (3)° | Plate, clear light orange |
| 0.12 × 0.11 × 0.04 mm | |
| Oxford Diffraction SuperNova (single source at offset, Atlas) diffractometer | 3493 independent reflections |
| Radiation source: SuperNova (Cu) X-ray Source | 3039 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.3546 pixels mm-1 | θmax = 73.6°, θmin = 3.6° |
| ω scans | |
| Absorption correction: analytical [ | |
| 12640 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3493 reflections | (Δ/σ)max = 0.001 |
| 208 parameters | Δρmax = 0.29 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.11717 (4) | 0.3582 (2) | 0.56405 (7) | 0.0263 (2) | |
| C2 | 0.07145 (4) | 0.5831 (2) | 0.52742 (7) | 0.0256 (2) | |
| C3 | 0.07308 (4) | 0.6313 (2) | 0.43624 (7) | 0.0221 (2) | |
| C4 | 0.11376 (4) | 0.4511 (2) | 0.41950 (7) | 0.0207 (2) | |
| C5 | 0.12551 (4) | 0.4485 (2) | 0.33845 (7) | 0.0243 (2) | |
| H5 | 0.1527 | 0.3249 | 0.3268 | 0.029* | |
| C6 | 0.09572 (4) | 0.6350 (2) | 0.27432 (7) | 0.0264 (2) | |
| H6 | 0.1030 | 0.6382 | 0.2179 | 0.032* | |
| C7 | 0.05561 (4) | 0.8162 (2) | 0.29048 (7) | 0.0280 (2) | |
| H7 | 0.0363 | 0.9419 | 0.2455 | 0.034* | |
| C8 | 0.04351 (4) | 0.8149 (2) | 0.37185 (7) | 0.0258 (2) | |
| H8 | 0.0158 | 0.9361 | 0.3831 | 0.031* | |
| C9 | 0.18532 (4) | 0.0978 (2) | 0.50360 (8) | 0.0262 (2) | |
| H9A | 0.1802 | −0.0161 | 0.4489 | 0.031* | |
| H9B | 0.1870 | −0.0370 | 0.5529 | 0.031* | |
| C10 | 0.23949 (4) | 0.2615 (2) | 0.52023 (8) | 0.0264 (2) | |
| H10A | 0.2396 | 0.3770 | 0.4674 | 0.032* | |
| H10B | 0.2421 | 0.3951 | 0.5701 | 0.032* | |
| C11 | 0.28944 (4) | 0.0655 (2) | 0.54105 (8) | 0.0261 (2) | |
| H11A | 0.2866 | −0.0697 | 0.4915 | 0.031* | |
| H11B | 0.2896 | −0.0483 | 0.5943 | 0.031* | |
| C12 | 0.34340 (4) | 0.2303 (2) | 0.55654 (8) | 0.0269 (2) | |
| H12A | 0.3441 | 0.3339 | 0.5018 | 0.032* | |
| H12B | 0.3448 | 0.3748 | 0.6032 | 0.032* | |
| C13 | 0.39431 (4) | 0.0414 (3) | 0.58348 (8) | 0.0275 (2) | |
| H13A | 0.3930 | −0.1032 | 0.5369 | 0.033* | |
| H13B | 0.3938 | −0.0620 | 0.6383 | 0.033* | |
| C14 | 0.44783 (4) | 0.2094 (3) | 0.59858 (8) | 0.0283 (3) | |
| H14A | 0.4485 | 0.3105 | 0.5434 | 0.034* | |
| H14B | 0.4487 | 0.3563 | 0.6444 | 0.034* | |
| C15 | 0.49914 (4) | 0.0237 (3) | 0.62696 (8) | 0.0285 (3) | |
| H15A | 0.4984 | −0.1232 | 0.5812 | 0.034* | |
| H15B | 0.4986 | −0.0771 | 0.6822 | 0.034* | |
| C16 | 0.55241 (4) | 0.1948 (3) | 0.64174 (8) | 0.0290 (3) | |
| H16A | 0.5528 | 0.2957 | 0.5865 | 0.035* | |
| H16B | 0.5531 | 0.3416 | 0.6875 | 0.035* | |
| C17 | 0.60399 (4) | 0.0110 (3) | 0.67010 (8) | 0.0290 (3) | |
| H17A | 0.6033 | −0.1358 | 0.6243 | 0.035* | |
| H17B | 0.6036 | −0.0900 | 0.7254 | 0.035* | |
| C18 | 0.65705 (4) | 0.1830 (3) | 0.68478 (8) | 0.0287 (3) | |
| H18A | 0.6574 | 0.2838 | 0.6294 | 0.034* | |
| H18B | 0.6576 | 0.3302 | 0.7304 | 0.034* | |
| C19 | 0.70879 (4) | 0.0017 (3) | 0.71327 (8) | 0.0319 (3) | |
| H19A | 0.7083 | −0.1461 | 0.6678 | 0.038* | |
| H19B | 0.7087 | −0.0981 | 0.7689 | 0.038* | |
| C20 | 0.76140 (5) | 0.1765 (3) | 0.72716 (9) | 0.0383 (3) | |
| H20A | 0.7626 | 0.3204 | 0.7731 | 0.046* | |
| H20B | 0.7622 | 0.2724 | 0.6720 | 0.046* | |
| H20C | 0.7932 | 0.0491 | 0.7453 | 0.046* | |
| N1 | 0.13859 (4) | 0.2877 (2) | 0.49531 (6) | 0.0237 (2) | |
| O1 | 0.13183 (4) | 0.2676 (2) | 0.63893 (5) | 0.0368 (2) | |
| O2 | 0.04303 (3) | 0.6876 (2) | 0.57083 (5) | 0.0350 (2) |
| C1 | 0.0228 (5) | 0.0325 (6) | 0.0234 (5) | −0.0083 (4) | 0.0058 (4) | −0.0017 (5) |
| C2 | 0.0203 (5) | 0.0317 (6) | 0.0250 (5) | −0.0069 (4) | 0.0063 (4) | −0.0076 (5) |
| C3 | 0.0169 (4) | 0.0255 (5) | 0.0240 (5) | −0.0034 (4) | 0.0056 (4) | −0.0056 (4) |
| C4 | 0.0168 (4) | 0.0231 (5) | 0.0212 (5) | −0.0028 (4) | 0.0029 (4) | −0.0021 (4) |
| C5 | 0.0201 (5) | 0.0290 (5) | 0.0248 (5) | 0.0006 (4) | 0.0077 (4) | −0.0035 (4) |
| C6 | 0.0262 (5) | 0.0324 (6) | 0.0206 (5) | −0.0028 (5) | 0.0063 (4) | −0.0013 (4) |
| C7 | 0.0248 (5) | 0.0290 (6) | 0.0274 (6) | 0.0008 (4) | 0.0017 (4) | 0.0018 (5) |
| C8 | 0.0192 (5) | 0.0263 (5) | 0.0308 (6) | 0.0010 (4) | 0.0044 (4) | −0.0040 (5) |
| C9 | 0.0192 (5) | 0.0256 (5) | 0.0320 (6) | 0.0005 (4) | 0.0034 (4) | 0.0025 (5) |
| C10 | 0.0192 (5) | 0.0257 (5) | 0.0322 (6) | −0.0005 (4) | 0.0031 (4) | 0.0015 (5) |
| C11 | 0.0188 (5) | 0.0277 (5) | 0.0297 (6) | 0.0002 (4) | 0.0025 (4) | 0.0019 (5) |
| C12 | 0.0193 (5) | 0.0294 (6) | 0.0308 (6) | −0.0003 (4) | 0.0042 (4) | 0.0016 (5) |
| C13 | 0.0188 (5) | 0.0316 (6) | 0.0308 (6) | 0.0004 (4) | 0.0038 (4) | 0.0014 (5) |
| C14 | 0.0189 (5) | 0.0336 (6) | 0.0315 (6) | 0.0002 (4) | 0.0046 (4) | 0.0015 (5) |
| C15 | 0.0188 (5) | 0.0342 (6) | 0.0315 (6) | 0.0005 (4) | 0.0043 (4) | 0.0023 (5) |
| C16 | 0.0191 (5) | 0.0345 (6) | 0.0323 (6) | 0.0000 (4) | 0.0048 (4) | 0.0004 (5) |
| C17 | 0.0194 (5) | 0.0357 (6) | 0.0308 (6) | 0.0012 (5) | 0.0047 (4) | 0.0034 (5) |
| C18 | 0.0194 (5) | 0.0355 (6) | 0.0300 (6) | 0.0003 (4) | 0.0041 (4) | 0.0005 (5) |
| C19 | 0.0217 (5) | 0.0403 (6) | 0.0326 (6) | 0.0029 (5) | 0.0052 (5) | 0.0050 (5) |
| C20 | 0.0193 (5) | 0.0507 (8) | 0.0428 (7) | 0.0010 (5) | 0.0044 (5) | 0.0007 (6) |
| N1 | 0.0187 (4) | 0.0286 (5) | 0.0232 (5) | −0.0001 (4) | 0.0042 (3) | 0.0013 (4) |
| O1 | 0.0369 (5) | 0.0487 (5) | 0.0239 (4) | −0.0068 (4) | 0.0060 (3) | 0.0062 (4) |
| O2 | 0.0287 (4) | 0.0505 (5) | 0.0288 (4) | −0.0021 (4) | 0.0127 (3) | −0.0127 (4) |
| C1—O1 | 1.2142 (14) | C12—H12A | 0.9900 |
| C1—N1 | 1.3656 (14) | C12—H12B | 0.9900 |
| C1—C2 | 1.5552 (16) | C13—C14 | 1.5252 (14) |
| C2—O2 | 1.2113 (13) | C13—H13A | 0.9900 |
| C2—C3 | 1.4601 (14) | C13—H13B | 0.9900 |
| C3—C8 | 1.3869 (16) | C14—C15 | 1.5251 (15) |
| C3—C4 | 1.4027 (14) | C14—H14A | 0.9900 |
| C4—C5 | 1.3789 (14) | C14—H14B | 0.9900 |
| C4—N1 | 1.4163 (14) | C15—C16 | 1.5275 (14) |
| C5—C6 | 1.3950 (16) | C15—H15A | 0.9900 |
| C5—H5 | 0.9500 | C15—H15B | 0.9900 |
| C6—C7 | 1.3909 (16) | C16—C17 | 1.5250 (15) |
| C6—H6 | 0.9500 | C16—H16A | 0.9900 |
| C7—C8 | 1.3878 (15) | C16—H16B | 0.9900 |
| C7—H7 | 0.9500 | C17—C18 | 1.5257 (15) |
| C8—H8 | 0.9500 | C17—H17A | 0.9900 |
| C9—N1 | 1.4528 (13) | C17—H17B | 0.9900 |
| C9—C10 | 1.5270 (14) | C18—C19 | 1.5220 (15) |
| C9—H9A | 0.9900 | C18—H18A | 0.9900 |
| C9—H9B | 0.9900 | C18—H18B | 0.9900 |
| C10—C11 | 1.5222 (14) | C19—C20 | 1.5239 (16) |
| C10—H10A | 0.9900 | C19—H19A | 0.9900 |
| C10—H10B | 0.9900 | C19—H19B | 0.9900 |
| C11—C12 | 1.5265 (14) | C20—H20A | 0.9800 |
| C11—H11A | 0.9900 | C20—H20B | 0.9800 |
| C11—H11B | 0.9900 | C20—H20C | 0.9800 |
| C12—C13 | 1.5238 (14) | ||
| O1—C1—N1 | 126.70 (11) | C14—C13—H13A | 108.9 |
| O1—C1—C2 | 127.24 (10) | C12—C13—H13B | 108.9 |
| N1—C1—C2 | 106.04 (9) | C14—C13—H13B | 108.9 |
| O2—C2—C3 | 131.26 (11) | H13A—C13—H13B | 107.8 |
| O2—C2—C1 | 123.57 (10) | C15—C14—C13 | 113.73 (10) |
| C3—C2—C1 | 105.16 (8) | C15—C14—H14A | 108.8 |
| C8—C3—C4 | 121.03 (10) | C13—C14—H14A | 108.8 |
| C8—C3—C2 | 131.64 (10) | C15—C14—H14B | 108.8 |
| C4—C3—C2 | 107.32 (9) | C13—C14—H14B | 108.8 |
| C5—C4—C3 | 121.28 (10) | H14A—C14—H14B | 107.7 |
| C5—C4—N1 | 128.13 (9) | C14—C15—C16 | 113.14 (10) |
| C3—C4—N1 | 110.58 (9) | C14—C15—H15A | 109.0 |
| C4—C5—C6 | 117.21 (9) | C16—C15—H15A | 109.0 |
| C4—C5—H5 | 121.4 | C14—C15—H15B | 109.0 |
| C6—C5—H5 | 121.4 | C16—C15—H15B | 109.0 |
| C7—C6—C5 | 121.95 (10) | H15A—C15—H15B | 107.8 |
| C7—C6—H6 | 119.0 | C17—C16—C15 | 113.57 (10) |
| C5—C6—H6 | 119.0 | C17—C16—H16A | 108.9 |
| C8—C7—C6 | 120.51 (10) | C15—C16—H16A | 108.9 |
| C8—C7—H7 | 119.7 | C17—C16—H16B | 108.9 |
| C6—C7—H7 | 119.7 | C15—C16—H16B | 108.9 |
| C3—C8—C7 | 118.01 (10) | H16A—C16—H16B | 107.7 |
| C3—C8—H8 | 121.0 | C16—C17—C18 | 113.33 (10) |
| C7—C8—H8 | 121.0 | C16—C17—H17A | 108.9 |
| N1—C9—C10 | 112.22 (9) | C18—C17—H17A | 108.9 |
| N1—C9—H9A | 109.2 | C16—C17—H17B | 108.9 |
| C10—C9—H9A | 109.2 | C18—C17—H17B | 108.9 |
| N1—C9—H9B | 109.2 | H17A—C17—H17B | 107.7 |
| C10—C9—H9B | 109.2 | C19—C18—C17 | 113.75 (10) |
| H9A—C9—H9B | 107.9 | C19—C18—H18A | 108.8 |
| C11—C10—C9 | 112.92 (9) | C17—C18—H18A | 108.8 |
| C11—C10—H10A | 109.0 | C19—C18—H18B | 108.8 |
| C9—C10—H10A | 109.0 | C17—C18—H18B | 108.8 |
| C11—C10—H10B | 109.0 | H18A—C18—H18B | 107.7 |
| C9—C10—H10B | 109.0 | C18—C19—C20 | 113.08 (11) |
| H10A—C10—H10B | 107.8 | C18—C19—H19A | 109.0 |
| C10—C11—C12 | 112.63 (9) | C20—C19—H19A | 109.0 |
| C10—C11—H11A | 109.1 | C18—C19—H19B | 109.0 |
| C12—C11—H11A | 109.1 | C20—C19—H19B | 109.0 |
| C10—C11—H11B | 109.1 | H19A—C19—H19B | 107.8 |
| C12—C11—H11B | 109.1 | C19—C20—H20A | 109.5 |
| H11A—C11—H11B | 107.8 | C19—C20—H20B | 109.5 |
| C13—C12—C11 | 113.86 (9) | H20A—C20—H20B | 109.5 |
| C13—C12—H12A | 108.8 | C19—C20—H20C | 109.5 |
| C11—C12—H12A | 108.8 | H20A—C20—H20C | 109.5 |
| C13—C12—H12B | 108.8 | H20B—C20—H20C | 109.5 |
| C11—C12—H12B | 108.8 | C1—N1—C4 | 110.82 (9) |
| H12A—C12—H12B | 107.7 | C1—N1—C9 | 123.54 (9) |
| C12—C13—C14 | 113.16 (9) | C4—N1—C9 | 125.19 (9) |
| C12—C13—H13A | 108.9 |
| H··· | ||||
| C6—H6···O1i | 0.95 | 2.47 | 3.1423 (14) | 127 |
| C6—H6···O2ii | 0.95 | 2.55 | 3.2360 (13) | 130 |
| C8—H8···O2iii | 0.95 | 2.52 | 3.4598 (13) | 169 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C6—H6⋯O1i | 0.95 | 2.47 | 3.1423 (14) | 127 |
| C6—H6⋯O2ii | 0.95 | 2.55 | 3.2360 (13) | 130 |
| C8—H8⋯O2iii | 0.95 | 2.52 | 3.4598 (13) | 169 |
Symmetry codes: (i) ; (ii) ; (iii) .