| Literature DB >> 24764900 |
Suchada Chantrapromma1, Pumsak Ruanwas1, Nawong Boonnak2, C S Chidan Kumar3, Hoong-Kun Fun3.
Abstract
Mol-ecules of the title compound, C16H16N4O7, are not planar with a dihedral angle of 5.50 (11)° between the substituted benzene rings. The two meta-meth-oxy groups of the 3,4,5-tri-meth-oxy-benzene moiety lie in the plane of the attached ring [Cmeth-yl-O-C-C torsion angles -0.1 (4)° and -3.7 (3)°] while the para-meth-oxy substituent lies out of the plane [Cmeth-yl-O-C-C, -86.0 (3)°]. An intra-molecular N-H⋯O hydrogen bond involving the 2-nitro substituent generates an S(6) ring motif. In the crystal structure, mol-ecules are linked by weak C-H⋯O inter-actions into screw chains, that are arranged into a sheet parallel to the bc plane. These sheets are connected by π-π stacking inter-actions between the nitro and meth-oxy substituted aromatic rings with a centroid-centroid separation of 3.9420 (13) Å. C-H⋯π contacts further stabilize the two-dimensional network.Entities:
Year: 2014 PMID: 24764900 PMCID: PMC3998339 DOI: 10.1107/S1600536814001238
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H16N4O7 | |
| Melting point = 496–497 K | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 2855 reflections |
| θ = 2.5–30.0° | |
| µ = 0.12 mm−1 | |
| Block, orange | |
| 0.58 × 0.30 × 0.24 mm | |
| Bruker APEXII CCD area detector diffractometer | 2855 independent reflections |
| Radiation source: sealed tube | 2243 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 30.0°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 20053 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2855 reflections | (Δ/σ)max = 0.001 |
| 251 parameters | Δρmax = 0.14 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 120.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.4866 (3) | 0.35711 (12) | 0.69622 (11) | 0.0629 (5) | |
| O2 | 0.4403 (4) | 0.38109 (15) | 0.56725 (12) | 0.0928 (9) | |
| O3 | 0.2099 (3) | 0.66252 (15) | 0.46266 (11) | 0.0705 (6) | |
| O4 | 0.1541 (4) | 0.77886 (16) | 0.54355 (13) | 0.0804 (7) | |
| O5 | 0.6955 (2) | 0.40878 (11) | 1.21814 (9) | 0.0482 (4) | |
| O6 | 0.6333 (2) | 0.58591 (11) | 1.26663 (9) | 0.0467 (4) | |
| O7 | 0.5222 (3) | 0.71519 (11) | 1.16062 (10) | 0.0620 (5) | |
| N1 | 0.4733 (3) | 0.49707 (14) | 0.80101 (11) | 0.0419 (4) | |
| H1N1 | 0.520 (3) | 0.4462 (17) | 0.7932 (14) | 0.041 (7)* | |
| N2 | 0.4873 (3) | 0.53900 (13) | 0.87742 (10) | 0.0436 (4) | |
| N3 | 0.4436 (3) | 0.40829 (14) | 0.63849 (13) | 0.0516 (5) | |
| N4 | 0.2094 (3) | 0.69931 (16) | 0.53100 (13) | 0.0535 (5) | |
| C1 | 0.4052 (3) | 0.54403 (15) | 0.73618 (12) | 0.0374 (4) | |
| C2 | 0.3933 (3) | 0.50496 (15) | 0.65539 (13) | 0.0391 (5) | |
| C3 | 0.3317 (3) | 0.55573 (17) | 0.58869 (13) | 0.0428 (5) | |
| H3A | 0.3279 | 0.5292 | 0.5362 | 0.051* | |
| C4 | 0.2756 (3) | 0.64651 (16) | 0.60122 (14) | 0.0425 (5) | |
| C5 | 0.2773 (3) | 0.68693 (16) | 0.67997 (14) | 0.0445 (5) | |
| H5A | 0.2349 | 0.7474 | 0.6878 | 0.053* | |
| C6 | 0.3416 (3) | 0.63669 (16) | 0.74534 (14) | 0.0434 (5) | |
| H6A | 0.3438 | 0.6642 | 0.7975 | 0.052* | |
| C7 | 0.5672 (3) | 0.48885 (17) | 0.93111 (13) | 0.0439 (5) | |
| H7A | 0.6149 | 0.4317 | 0.9148 | 0.053* | |
| C8 | 0.5867 (3) | 0.51809 (16) | 1.01780 (13) | 0.0422 (5) | |
| C9 | 0.6408 (3) | 0.45032 (17) | 1.07387 (13) | 0.0419 (5) | |
| H9A | 0.6717 | 0.3909 | 1.0554 | 0.050* | |
| C10 | 0.6487 (3) | 0.47149 (16) | 1.15789 (13) | 0.0401 (5) | |
| C11 | 0.6106 (3) | 0.56190 (16) | 1.18476 (13) | 0.0408 (5) | |
| C12 | 0.5579 (3) | 0.63001 (15) | 1.12739 (14) | 0.0446 (5) | |
| C13 | 0.5446 (4) | 0.60796 (16) | 1.04410 (13) | 0.0467 (6) | |
| H13A | 0.5080 | 0.6529 | 1.0061 | 0.056* | |
| C14 | 0.7279 (4) | 0.31452 (17) | 1.19216 (17) | 0.0543 (6) | |
| H14A | 0.7677 | 0.2782 | 1.2386 | 0.081* | |
| H14B | 0.8182 | 0.3140 | 1.1499 | 0.081* | |
| H14C | 0.6193 | 0.2882 | 1.1706 | 0.081* | |
| C15 | 0.4822 (4) | 0.5655 (2) | 1.31779 (15) | 0.0589 (7) | |
| H15A | 0.5073 | 0.5840 | 1.3737 | 0.088* | |
| H15B | 0.4581 | 0.4996 | 1.3162 | 0.088* | |
| H15C | 0.3797 | 0.5991 | 1.2978 | 0.088* | |
| C16 | 0.4671 (7) | 0.78726 (19) | 1.10517 (18) | 0.0905 (13) | |
| H16A | 0.4494 | 0.8442 | 1.1355 | 0.136* | |
| H16B | 0.3571 | 0.7695 | 1.0788 | 0.136* | |
| H16C | 0.5578 | 0.7966 | 1.0639 | 0.136* |
| O1 | 0.0928 (15) | 0.0415 (8) | 0.0545 (10) | 0.0056 (11) | −0.0095 (11) | −0.0040 (8) |
| O2 | 0.157 (3) | 0.0725 (13) | 0.0492 (11) | 0.0356 (16) | −0.0179 (14) | −0.0286 (10) |
| O3 | 0.0917 (15) | 0.0789 (13) | 0.0410 (10) | −0.0034 (13) | −0.0048 (10) | 0.0092 (9) |
| O4 | 0.1078 (19) | 0.0642 (13) | 0.0691 (13) | 0.0249 (14) | 0.0022 (13) | 0.0156 (10) |
| O5 | 0.0592 (11) | 0.0459 (9) | 0.0394 (8) | 0.0015 (8) | −0.0075 (7) | 0.0025 (7) |
| O6 | 0.0545 (10) | 0.0552 (9) | 0.0304 (7) | −0.0098 (8) | −0.0006 (7) | −0.0059 (7) |
| O7 | 0.1072 (16) | 0.0410 (8) | 0.0376 (8) | 0.0064 (11) | 0.0011 (10) | −0.0034 (7) |
| N1 | 0.0522 (12) | 0.0412 (10) | 0.0322 (9) | 0.0014 (10) | 0.0006 (8) | −0.0061 (7) |
| N2 | 0.0522 (12) | 0.0476 (10) | 0.0309 (8) | −0.0034 (9) | 0.0013 (8) | −0.0056 (7) |
| N3 | 0.0627 (14) | 0.0454 (10) | 0.0468 (11) | 0.0015 (11) | −0.0025 (10) | −0.0120 (9) |
| N4 | 0.0556 (13) | 0.0585 (13) | 0.0465 (12) | −0.0041 (11) | 0.0039 (10) | 0.0121 (10) |
| C1 | 0.0364 (11) | 0.0419 (11) | 0.0338 (10) | −0.0058 (9) | 0.0027 (8) | −0.0034 (8) |
| C2 | 0.0432 (12) | 0.0397 (11) | 0.0345 (10) | −0.0020 (10) | 0.0015 (9) | −0.0079 (9) |
| C3 | 0.0442 (12) | 0.0530 (13) | 0.0313 (10) | −0.0056 (11) | 0.0008 (9) | −0.0057 (9) |
| C4 | 0.0409 (12) | 0.0473 (13) | 0.0393 (11) | −0.0054 (10) | 0.0002 (9) | 0.0051 (9) |
| C5 | 0.0461 (12) | 0.0395 (12) | 0.0479 (12) | −0.0003 (10) | 0.0027 (11) | −0.0031 (10) |
| C6 | 0.0472 (13) | 0.0444 (12) | 0.0387 (11) | −0.0001 (11) | 0.0033 (10) | −0.0086 (9) |
| C7 | 0.0505 (14) | 0.0474 (12) | 0.0338 (10) | −0.0023 (11) | 0.0026 (10) | −0.0050 (9) |
| C8 | 0.0451 (13) | 0.0502 (13) | 0.0312 (10) | −0.0030 (10) | −0.0011 (9) | −0.0019 (8) |
| C9 | 0.0438 (13) | 0.0434 (12) | 0.0384 (11) | −0.0010 (10) | −0.0004 (10) | −0.0060 (9) |
| C10 | 0.0389 (12) | 0.0452 (12) | 0.0361 (10) | −0.0036 (10) | −0.0039 (9) | 0.0004 (8) |
| C11 | 0.0455 (12) | 0.0455 (12) | 0.0315 (10) | −0.0065 (10) | −0.0008 (9) | −0.0027 (9) |
| C12 | 0.0573 (15) | 0.0409 (11) | 0.0356 (10) | −0.0028 (11) | 0.0012 (10) | −0.0036 (9) |
| C13 | 0.0617 (16) | 0.0462 (12) | 0.0321 (10) | −0.0020 (12) | 0.0023 (10) | 0.0012 (8) |
| C14 | 0.0585 (15) | 0.0468 (14) | 0.0576 (15) | 0.0035 (12) | −0.0082 (13) | 0.0014 (11) |
| C15 | 0.0664 (17) | 0.0673 (16) | 0.0429 (13) | −0.0129 (15) | 0.0121 (13) | −0.0077 (11) |
| C16 | 0.172 (4) | 0.0442 (14) | 0.0557 (16) | 0.019 (2) | −0.002 (2) | 0.0042 (12) |
| O1—N3 | 1.229 (3) | C5—C6 | 1.365 (3) |
| O2—N3 | 1.215 (3) | C5—H5A | 0.9300 |
| O3—N4 | 1.223 (3) | C6—H6A | 0.9300 |
| O4—N4 | 1.228 (3) | C7—C8 | 1.469 (3) |
| O5—C10 | 1.369 (3) | C7—H7A | 0.9300 |
| O5—C14 | 1.433 (3) | C8—C9 | 1.387 (3) |
| O6—C11 | 1.377 (2) | C8—C13 | 1.391 (3) |
| O6—C15 | 1.430 (3) | C9—C10 | 1.392 (3) |
| O7—C12 | 1.358 (3) | C9—H9A | 0.9300 |
| O7—C16 | 1.427 (3) | C10—C11 | 1.394 (3) |
| N1—C1 | 1.344 (3) | C11—C12 | 1.402 (3) |
| N1—N2 | 1.376 (2) | C12—C13 | 1.386 (3) |
| N1—H1N1 | 0.82 (2) | C13—H13A | 0.9300 |
| N2—C7 | 1.274 (3) | C14—H14A | 0.9600 |
| N3—C2 | 1.459 (3) | C14—H14B | 0.9600 |
| N4—C4 | 1.450 (3) | C14—H14C | 0.9600 |
| C1—C6 | 1.416 (3) | C15—H15A | 0.9600 |
| C1—C2 | 1.423 (3) | C15—H15B | 0.9600 |
| C2—C3 | 1.379 (3) | C15—H15C | 0.9600 |
| C3—C4 | 1.380 (3) | C16—H16A | 0.9600 |
| C3—H3A | 0.9300 | C16—H16B | 0.9600 |
| C4—C5 | 1.398 (3) | C16—H16C | 0.9600 |
| C10—O5—C14 | 116.87 (18) | C9—C8—C7 | 116.9 (2) |
| C11—O6—C15 | 114.02 (18) | C13—C8—C7 | 122.2 (2) |
| C12—O7—C16 | 117.21 (18) | C8—C9—C10 | 119.8 (2) |
| C1—N1—N2 | 120.63 (18) | C8—C9—H9A | 120.1 |
| C1—N1—H1N1 | 119.1 (17) | C10—C9—H9A | 120.1 |
| N2—N1—H1N1 | 119.6 (17) | O5—C10—C9 | 124.1 (2) |
| C7—N2—N1 | 113.60 (19) | O5—C10—C11 | 116.05 (19) |
| O2—N3—O1 | 122.2 (2) | C9—C10—C11 | 119.8 (2) |
| O2—N3—C2 | 118.4 (2) | O6—C11—C10 | 120.4 (2) |
| O1—N3—C2 | 119.38 (19) | O6—C11—C12 | 119.7 (2) |
| O3—N4—O4 | 123.3 (2) | C10—C11—C12 | 119.80 (19) |
| O3—N4—C4 | 118.7 (2) | O7—C12—C13 | 125.0 (2) |
| O4—N4—C4 | 118.0 (2) | O7—C12—C11 | 114.71 (18) |
| N1—C1—C6 | 120.90 (19) | C13—C12—C11 | 120.3 (2) |
| N1—C1—C2 | 122.81 (19) | C12—C13—C8 | 119.4 (2) |
| C6—C1—C2 | 116.3 (2) | C12—C13—H13A | 120.3 |
| C3—C2—C1 | 122.1 (2) | C8—C13—H13A | 120.3 |
| C3—C2—N3 | 116.06 (18) | O5—C14—H14A | 109.5 |
| C1—C2—N3 | 121.9 (2) | O5—C14—H14B | 109.5 |
| C2—C3—C4 | 118.87 (19) | H14A—C14—H14B | 109.5 |
| C2—C3—H3A | 120.6 | O5—C14—H14C | 109.5 |
| C4—C3—H3A | 120.6 | H14A—C14—H14C | 109.5 |
| C3—C4—C5 | 121.4 (2) | H14B—C14—H14C | 109.5 |
| C3—C4—N4 | 118.6 (2) | O6—C15—H15A | 109.5 |
| C5—C4—N4 | 120.0 (2) | O6—C15—H15B | 109.5 |
| C6—C5—C4 | 119.3 (2) | H15A—C15—H15B | 109.5 |
| C6—C5—H5A | 120.4 | O6—C15—H15C | 109.5 |
| C4—C5—H5A | 120.4 | H15A—C15—H15C | 109.5 |
| C5—C6—C1 | 122.0 (2) | H15B—C15—H15C | 109.5 |
| C5—C6—H6A | 119.0 | O7—C16—H16A | 109.5 |
| C1—C6—H6A | 119.0 | O7—C16—H16B | 109.5 |
| N2—C7—C8 | 122.3 (2) | H16A—C16—H16B | 109.5 |
| N2—C7—H7A | 118.8 | O7—C16—H16C | 109.5 |
| C8—C7—H7A | 118.8 | H16A—C16—H16C | 109.5 |
| C9—C8—C13 | 120.9 (2) | H16B—C16—H16C | 109.5 |
| C1—N1—N2—C7 | −174.7 (2) | N2—C7—C8—C9 | 166.5 (2) |
| N2—N1—C1—C6 | −1.8 (3) | N2—C7—C8—C13 | −10.3 (4) |
| N2—N1—C1—C2 | 177.9 (2) | C13—C8—C9—C10 | 1.8 (4) |
| N1—C1—C2—C3 | −176.6 (2) | C7—C8—C9—C10 | −175.1 (2) |
| C6—C1—C2—C3 | 3.1 (3) | C14—O5—C10—C9 | −3.7 (3) |
| N1—C1—C2—N3 | 4.2 (4) | C14—O5—C10—C11 | 177.5 (2) |
| C6—C1—C2—N3 | −176.1 (2) | C8—C9—C10—O5 | 178.1 (2) |
| O2—N3—C2—C3 | 5.1 (4) | C8—C9—C10—C11 | −3.1 (4) |
| O1—N3—C2—C3 | −174.5 (2) | C15—O6—C11—C10 | −86.0 (3) |
| O2—N3—C2—C1 | −175.7 (3) | C15—O6—C11—C12 | 97.3 (3) |
| O1—N3—C2—C1 | 4.7 (4) | O5—C10—C11—O6 | 4.6 (3) |
| C1—C2—C3—C4 | −1.7 (4) | C9—C10—C11—O6 | −174.2 (2) |
| N3—C2—C3—C4 | 177.6 (2) | O5—C10—C11—C12 | −178.6 (2) |
| C2—C3—C4—C5 | −1.2 (4) | C9—C10—C11—C12 | 2.5 (4) |
| C2—C3—C4—N4 | −179.4 (2) | C16—O7—C12—C13 | −0.1 (4) |
| O3—N4—C4—C3 | −1.9 (3) | C16—O7—C12—C11 | −179.8 (3) |
| O4—N4—C4—C3 | 177.5 (3) | O6—C11—C12—O7 | −4.0 (3) |
| O3—N4—C4—C5 | 179.8 (2) | C10—C11—C12—O7 | 179.2 (2) |
| O4—N4—C4—C5 | −0.8 (3) | O6—C11—C12—C13 | 176.3 (2) |
| C3—C4—C5—C6 | 2.4 (4) | C10—C11—C12—C13 | −0.5 (4) |
| N4—C4—C5—C6 | −179.4 (2) | O7—C12—C13—C8 | 179.4 (2) |
| C4—C5—C6—C1 | −0.8 (4) | C11—C12—C13—C8 | −0.9 (4) |
| N1—C1—C6—C5 | 177.8 (2) | C9—C8—C13—C12 | 0.3 (4) |
| C2—C1—C6—C5 | −1.8 (3) | C7—C8—C13—C12 | 177.0 (2) |
| N1—N2—C7—C8 | −176.2 (2) |
| H··· | ||||
| N1—H1 | 0.82 (2) | 2.04 (2) | 2.624 (3) | 129 (2) |
| C16—H16 | 0.96 | 2.44 | 3.169 (4) | 133 |
| C14—H14 | 0.96 | 2.89 | 3.514 (3) | 123 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C1–C6 benzene ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.82 (2) | 2.04 (2) | 2.624 (3) | 129 (2) |
| C16—H16 | 0.96 | 2.44 | 3.169 (4) | 133 |
| C14—H14 | 0.96 | 2.89 | 3.514 (3) | 123 |
Symmetry codes: (i) ; (ii) .