Literature DB >> 24764871

(E)-1-[2-(2-Nitro-styr-yl)-1-phenyl-sulfonyl-1H-indol-3-yl]propan-1-one.

J Kanchanadevi1, G Anbalagan2, V Saravanan3, A K Mohanakrishnan3, B Gunasekaran4, V Manivannan5.   

Abstract

In the title compound, C25H20N2O5S, the phenyl ring makes dihedral angles of 89.88 (8) and 13.98 (8)°, respectively, with the indole ring system and the nitro-benzene ring. The dihedral angle between the indole ring system and the nitro-benzene ring is 88.48 (11)°. The mol-ecular structure is stabilized by a weak intra-molecular C-H⋯O inter-action. In the crystal, π-π inter-actions, with centroid-centroid distances of 3.6741 (18) and 3.8873 (17) Å, link the mol-ecules into layers parallel to the ab plane.

Entities:  

Year:  2014        PMID: 24764871      PMCID: PMC3998310          DOI: 10.1107/S1600536814000506

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological activity of indole derivatives, see: Andreani et al. (2001 ▶); Quetin-Leclercq (1994 ▶); Mukhopadhyay et al. (1981 ▶); Singh et al. (2000 ▶). For related structures, see: Umadevi et al. (2013 ▶); Kanchanadevi et al. (2014 ▶).

Experimental

Crystal data

C25H20N2O5S M = 460.49 Monoclinic, a = 21.6100 (18) Å b = 8.3072 (7) Å c = 25.898 (3) Å β = 112.379 (2)° V = 4299.1 (7) Å3 Z = 8 Mo Kα radiation μ = 0.19 mm−1 T = 295 K 0.30 × 0.25 × 0.25 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.945, T max = 0.955 40633 measured reflections 5343 independent reflections 3700 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.151 S = 1.04 5343 reflections 299 parameters H-atom parameters constrained Δρmax = 0.66 e Å−3 Δρmin = −0.67 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814000506/is5331sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814000506/is5331Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814000506/is5331Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C25H20N2O5SF(000) = 1920
Mr = 460.49Dx = 1.423 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 5350 reflections
a = 21.6100 (18) Åθ = 2.0–28.3°
b = 8.3072 (7) ŵ = 0.19 mm1
c = 25.898 (3) ÅT = 295 K
β = 112.379 (2)°Block, yellow
V = 4299.1 (7) Å30.30 × 0.25 × 0.25 mm
Z = 8
Bruker APEXII CCD diffractometer5343 independent reflections
Radiation source: fine-focus sealed tube3700 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.044
Detector resolution: 0 pixels mm-1θmax = 28.3°, θmin = 2.0°
ω and φ scansh = −28→28
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −11→11
Tmin = 0.945, Tmax = 0.955l = −32→34
40633 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.151H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0587P)2 + 6.0066P] where P = (Fo2 + 2Fc2)/3
5343 reflections(Δ/σ)max = 0.001
299 parametersΔρmax = 0.66 e Å3
0 restraintsΔρmin = −0.67 e Å3
xyzUiso*/Ueq
C10.15190 (11)−0.0496 (3)0.50378 (9)0.0411 (5)
C20.08840 (13)−0.1098 (3)0.47316 (10)0.0544 (7)
H20.0544−0.10710.48690.065*
C30.07820 (16)−0.1738 (3)0.42139 (11)0.0649 (8)
H30.0364−0.21570.39970.078*
C40.12856 (17)−0.1769 (3)0.40107 (11)0.0647 (8)
H40.1199−0.22070.36590.078*
C50.19136 (15)−0.1172 (3)0.43131 (10)0.0561 (7)
H50.2249−0.12080.41710.067*
C60.20352 (12)−0.0506 (3)0.48417 (9)0.0433 (5)
C70.26149 (11)0.0260 (3)0.52583 (9)0.0400 (5)
C80.24458 (10)0.0690 (3)0.56984 (8)0.0356 (5)
C90.28201 (11)0.1582 (3)0.62103 (9)0.0384 (5)
H90.26540.25750.62620.046*
C100.33832 (11)0.1058 (3)0.66058 (8)0.0384 (5)
H100.35330.00320.65680.046*
C110.37820 (10)0.2010 (3)0.71009 (9)0.0374 (5)
C120.37603 (13)0.3685 (3)0.70753 (11)0.0503 (6)
H120.34820.41780.67460.060*
C130.41344 (15)0.4635 (4)0.75177 (14)0.0651 (8)
H130.40980.57490.74870.078*
C140.45614 (14)0.3952 (4)0.80052 (12)0.0661 (8)
H140.48140.45980.83040.079*
C150.46118 (13)0.2320 (4)0.80475 (10)0.0566 (7)
H150.49060.18470.83740.068*
C160.42243 (11)0.1363 (3)0.76039 (9)0.0415 (5)
C170.16595 (11)−0.1823 (3)0.63322 (9)0.0372 (5)
C180.22218 (12)−0.1958 (3)0.68196 (10)0.0479 (6)
H180.2470−0.10510.69870.057*
C190.24071 (14)−0.3460 (3)0.70527 (11)0.0578 (7)
H190.2782−0.35710.73810.069*
C200.20406 (15)−0.4794 (3)0.68021 (11)0.0549 (7)
H200.2169−0.58020.69640.066*
C210.14871 (15)−0.4656 (3)0.63161 (11)0.0548 (7)
H210.1243−0.55670.61490.066*
C220.12933 (12)−0.3159 (3)0.60758 (10)0.0473 (6)
H220.0920−0.30550.57450.057*
C230.32263 (14)0.0616 (4)0.51526 (11)0.0565 (7)
C250.43883 (15)0.1576 (5)0.53443 (13)0.0788 (10)
H25A0.45560.05380.52990.118*
H25B0.47440.22010.56050.118*
H25C0.42160.21200.49910.118*
N10.17663 (9)0.0287 (2)0.55666 (7)0.0387 (4)
N20.42953 (12)−0.0372 (3)0.76957 (9)0.0551 (6)
O10.07086 (8)0.0081 (2)0.57260 (8)0.0582 (5)
O20.16992 (9)0.1277 (2)0.64547 (7)0.0495 (4)
O30.38239 (11)−0.1241 (2)0.74363 (8)0.0685 (6)
O40.48249 (12)−0.0875 (3)0.80380 (10)0.0950 (8)
O50.32135 (15)0.0336 (6)0.46959 (12)0.1606 (19)
C240.38311 (13)0.1372 (4)0.55629 (11)0.0596 (7)
H24A0.39940.07160.58980.072*
H24B0.37140.24200.56640.072*
S10.14097 (3)0.00862 (7)0.60389 (2)0.04073 (16)
U11U22U33U12U13U23
C10.0433 (12)0.0396 (12)0.0310 (10)0.0040 (9)0.0034 (9)0.0030 (9)
C20.0478 (14)0.0557 (15)0.0461 (13)−0.0036 (12)0.0025 (11)0.0019 (12)
C30.0667 (18)0.0546 (16)0.0486 (15)−0.0027 (14)−0.0058 (14)−0.0016 (13)
C40.089 (2)0.0498 (15)0.0366 (13)0.0053 (15)0.0028 (14)−0.0063 (11)
C50.0748 (18)0.0494 (14)0.0405 (13)0.0120 (13)0.0180 (13)−0.0017 (11)
C60.0512 (13)0.0389 (12)0.0339 (11)0.0084 (10)0.0095 (10)0.0037 (9)
C70.0407 (12)0.0423 (12)0.0352 (11)0.0064 (9)0.0123 (9)0.0031 (9)
C80.0356 (11)0.0343 (10)0.0332 (10)0.0040 (8)0.0090 (8)0.0050 (8)
C90.0389 (11)0.0376 (11)0.0385 (11)0.0001 (9)0.0145 (9)−0.0019 (9)
C100.0428 (12)0.0363 (11)0.0347 (10)0.0010 (9)0.0131 (9)0.0001 (9)
C110.0344 (10)0.0423 (12)0.0367 (11)−0.0020 (9)0.0147 (9)−0.0035 (9)
C120.0466 (13)0.0431 (13)0.0569 (15)−0.0023 (11)0.0149 (11)−0.0004 (11)
C130.0616 (18)0.0473 (15)0.086 (2)−0.0141 (13)0.0275 (16)−0.0191 (14)
C140.0574 (17)0.078 (2)0.0618 (17)−0.0217 (15)0.0214 (14)−0.0309 (16)
C150.0452 (14)0.085 (2)0.0363 (12)−0.0074 (13)0.0113 (11)−0.0076 (13)
C160.0363 (11)0.0537 (14)0.0349 (11)−0.0011 (10)0.0141 (9)−0.0005 (10)
C170.0365 (11)0.0407 (11)0.0379 (11)−0.0014 (9)0.0182 (9)−0.0015 (9)
C180.0489 (13)0.0472 (13)0.0415 (12)−0.0043 (11)0.0105 (11)0.0003 (10)
C190.0615 (16)0.0576 (16)0.0476 (14)0.0064 (13)0.0131 (12)0.0084 (12)
C200.0778 (19)0.0422 (13)0.0542 (15)0.0059 (13)0.0358 (14)0.0061 (11)
C210.0716 (18)0.0438 (14)0.0562 (15)−0.0095 (12)0.0324 (14)−0.0099 (11)
C220.0475 (13)0.0507 (14)0.0432 (13)−0.0071 (11)0.0168 (11)−0.0063 (11)
C230.0539 (15)0.0727 (18)0.0490 (14)0.0045 (13)0.0263 (12)−0.0045 (13)
C250.0535 (17)0.117 (3)0.071 (2)−0.0062 (18)0.0306 (15)0.0107 (19)
N10.0353 (9)0.0444 (10)0.0335 (9)−0.0002 (8)0.0096 (7)0.0003 (8)
N20.0550 (13)0.0605 (14)0.0427 (11)0.0093 (11)0.0106 (10)0.0101 (10)
O10.0334 (9)0.0724 (12)0.0652 (11)0.0094 (8)0.0146 (8)0.0086 (10)
O20.0594 (10)0.0413 (9)0.0533 (10)0.0017 (8)0.0276 (8)−0.0066 (7)
O30.0716 (13)0.0500 (11)0.0676 (12)−0.0019 (10)0.0083 (10)0.0098 (10)
O40.0792 (15)0.0911 (17)0.0785 (15)0.0235 (13)−0.0106 (12)0.0267 (13)
O50.099 (2)0.318 (5)0.0942 (19)−0.081 (3)0.0701 (17)−0.103 (3)
C240.0500 (15)0.0769 (19)0.0548 (15)−0.0035 (13)0.0232 (12)0.0066 (14)
S10.0360 (3)0.0430 (3)0.0434 (3)0.0043 (2)0.0154 (2)0.0012 (2)
C1—C61.390 (3)C15—C161.386 (3)
C1—C21.390 (3)C15—H150.9300
C1—N11.424 (3)C16—N21.460 (3)
C2—C31.380 (4)C17—C221.378 (3)
C2—H20.9300C17—C181.384 (3)
C3—C41.378 (5)C17—S11.753 (2)
C3—H30.9300C18—C191.378 (4)
C4—C51.376 (4)C18—H180.9300
C4—H40.9300C19—C201.373 (4)
C5—C61.405 (3)C19—H190.9300
C5—H50.9300C20—C211.372 (4)
C6—C71.452 (3)C20—H200.9300
C7—C81.370 (3)C21—C221.382 (4)
C7—C231.478 (4)C21—H210.9300
C8—N11.415 (3)C22—H220.9300
C8—C91.464 (3)C23—O51.195 (3)
C9—C101.331 (3)C23—C241.475 (4)
C9—H90.9300C25—C241.523 (4)
C10—C111.474 (3)C25—H25A0.9600
C10—H100.9300C25—H25B0.9600
C11—C121.393 (3)C25—H25C0.9600
C11—C161.397 (3)N1—S11.6838 (19)
C12—C131.372 (4)N2—O31.220 (3)
C12—H120.9300N2—O41.224 (3)
C13—C141.371 (4)O1—S11.4204 (17)
C13—H130.9300O2—S11.4198 (17)
C14—C151.361 (4)C24—H24A0.9700
C14—H140.9300C24—H24B0.9700
C6—C1—C2123.0 (2)C11—C16—N2121.6 (2)
C6—C1—N1107.12 (19)C22—C17—C18121.2 (2)
C2—C1—N1129.8 (2)C22—C17—S1119.64 (17)
C3—C2—C1116.8 (3)C18—C17—S1119.14 (17)
C3—C2—H2121.6C19—C18—C17118.7 (2)
C1—C2—H2121.6C19—C18—H18120.6
C4—C3—C2121.4 (3)C17—C18—H18120.6
C4—C3—H3119.3C20—C19—C18120.3 (2)
C2—C3—H3119.3C20—C19—H19119.8
C5—C4—C3121.8 (3)C18—C19—H19119.8
C5—C4—H4119.1C21—C20—C19120.7 (2)
C3—C4—H4119.1C21—C20—H20119.6
C4—C5—C6118.3 (3)C19—C20—H20119.6
C4—C5—H5120.8C20—C21—C22119.8 (2)
C6—C5—H5120.8C20—C21—H21120.1
C1—C6—C5118.6 (2)C22—C21—H21120.1
C1—C6—C7108.1 (2)C17—C22—C21119.2 (2)
C5—C6—C7133.2 (2)C17—C22—H22120.4
C8—C7—C6107.7 (2)C21—C22—H22120.4
C8—C7—C23130.0 (2)O5—C23—C24118.4 (3)
C6—C7—C23122.0 (2)O5—C23—C7117.3 (3)
C7—C8—N1108.57 (18)C24—C23—C7124.2 (2)
C7—C8—C9130.9 (2)C24—C25—H25A109.5
N1—C8—C9120.19 (19)C24—C25—H25B109.5
C10—C9—C8124.0 (2)H25A—C25—H25B109.5
C10—C9—H9118.0C24—C25—H25C109.5
C8—C9—H9118.0H25A—C25—H25C109.5
C9—C10—C11123.7 (2)H25B—C25—H25C109.5
C9—C10—H10118.2C8—N1—C1108.36 (18)
C11—C10—H10118.2C8—N1—S1124.61 (14)
C12—C11—C16115.3 (2)C1—N1—S1123.06 (16)
C12—C11—C10119.8 (2)O3—N2—O4123.5 (3)
C16—C11—C10124.8 (2)O3—N2—C16118.7 (2)
C13—C12—C11122.4 (3)O4—N2—C16117.8 (2)
C13—C12—H12118.8C23—C24—C25112.9 (2)
C11—C12—H12118.8C23—C24—H24A109.0
C14—C13—C12120.4 (3)C25—C24—H24A109.0
C14—C13—H13119.8C23—C24—H24B109.0
C12—C13—H13119.8C25—C24—H24B109.0
C15—C14—C13119.4 (3)H24A—C24—H24B107.8
C15—C14—H14120.3O2—S1—O1120.06 (11)
C13—C14—H14120.3O2—S1—N1106.89 (10)
C14—C15—C16120.0 (3)O1—S1—N1105.65 (10)
C14—C15—H15120.0O2—S1—C17109.13 (10)
C16—C15—H15120.0O1—S1—C17109.28 (11)
C15—C16—C11122.4 (2)N1—S1—C17104.71 (10)
C15—C16—N2116.0 (2)
C6—C1—C2—C30.6 (4)C17—C18—C19—C200.4 (4)
N1—C1—C2—C3177.1 (2)C18—C19—C20—C210.2 (4)
C1—C2—C3—C4−0.3 (4)C19—C20—C21—C22−0.2 (4)
C2—C3—C4—C50.2 (4)C18—C17—C22—C211.0 (4)
C3—C4—C5—C6−0.4 (4)S1—C17—C22—C21−178.78 (19)
C2—C1—C6—C5−0.8 (4)C20—C21—C22—C17−0.4 (4)
N1—C1—C6—C5−178.0 (2)C8—C7—C23—O5−167.9 (4)
C2—C1—C6—C7178.1 (2)C6—C7—C23—O54.3 (5)
N1—C1—C6—C70.9 (2)C8—C7—C23—C248.5 (4)
C4—C5—C6—C10.7 (4)C6—C7—C23—C24−179.2 (3)
C4—C5—C6—C7−177.9 (2)C7—C8—N1—C13.1 (2)
C1—C6—C7—C81.0 (3)C9—C8—N1—C1177.08 (18)
C5—C6—C7—C8179.7 (2)C7—C8—N1—S1161.12 (16)
C1—C6—C7—C23−172.8 (2)C9—C8—N1—S1−24.9 (3)
C5—C6—C7—C235.9 (4)C6—C1—N1—C8−2.4 (2)
C6—C7—C8—N1−2.5 (2)C2—C1—N1—C8−179.3 (2)
C23—C7—C8—N1170.6 (2)C6—C1—N1—S1−160.86 (16)
C6—C7—C8—C9−175.6 (2)C2—C1—N1—S122.2 (3)
C23—C7—C8—C9−2.5 (4)C15—C16—N2—O3152.5 (2)
C7—C8—C9—C10−64.8 (3)C11—C16—N2—O3−26.4 (4)
N1—C8—C9—C10122.7 (2)C15—C16—N2—O4−26.3 (4)
C8—C9—C10—C11175.6 (2)C11—C16—N2—O4154.8 (2)
C9—C10—C11—C12−27.0 (3)O5—C23—C24—C25−4.3 (5)
C9—C10—C11—C16156.7 (2)C7—C23—C24—C25179.3 (3)
C16—C11—C12—C13−1.6 (4)C8—N1—S1—O236.9 (2)
C10—C11—C12—C13−178.2 (2)C1—N1—S1—O2−168.17 (17)
C11—C12—C13—C141.4 (4)C8—N1—S1—O1165.85 (18)
C12—C13—C14—C150.0 (5)C1—N1—S1—O1−39.2 (2)
C13—C14—C15—C16−1.2 (4)C8—N1—S1—C17−78.81 (19)
C14—C15—C16—C111.1 (4)C1—N1—S1—C1776.13 (19)
C14—C15—C16—N2−177.9 (2)C22—C17—S1—O2159.83 (18)
C12—C11—C16—C150.3 (3)C18—C17—S1—O2−20.0 (2)
C10—C11—C16—C15176.8 (2)C22—C17—S1—O126.7 (2)
C12—C11—C16—N2179.2 (2)C18—C17—S1—O1−153.07 (19)
C10—C11—C16—N2−4.4 (3)C22—C17—S1—N1−86.0 (2)
C22—C17—C18—C19−1.0 (4)C18—C17—S1—N194.2 (2)
S1—C17—C18—C19178.8 (2)
D—H···AD—HH···AD···AD—H···A
C2—H2···O10.932.322.912 (3)121
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C2—H2⋯O10.932.322.912 (3)121
  8 in total

1.  Antifungal activity of venenatine, an indole alkaloid isolated from Alstonia venenata.

Authors:  U P Singh; B K Sarma; P K Mishra; A B Ray
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Review 3.  [Potential anticancer and antiparasitic indole alkaloids].

Authors:  J Quetin-Leclercq
Journal:  J Pharm Belg       Date:  1994 May-Jun

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Authors:  A Andreani; M Granaiola; A Leoni; A Locatelli; R Morigi; M Rambaldi; G Giorgi; L Salvini; V Garaliene
Journal:  Anticancer Drug Des       Date:  2001 Apr-Jun

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Authors:  S Mukhopadhyay; G A Handy; S Funayama; G A Cordell
Journal:  J Nat Prod       Date:  1981 Nov-Dec       Impact factor: 4.050

6.  (E)-2-Bromo-1-[2-(2-nitro-styr-yl)-1-phenyl-sulfonyl-1H-indol-3-yl]ethanone.

Authors:  J Kanchanadevi; G Anbalagan; V Saravanan; A K Mohanakrishnan; B Gunasekaran; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-15

7.  (Z)-3-(1-Chloro-prop-1-en-yl)-2-methyl-1-phenyl-sulfonyl-1H-indole.

Authors:  M Umadevi; V Saravanan; R Yamuna; A K Mohanakrishnan; G Chakkaravarthi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-16

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total
  2 in total

1.  (E)-2-Bromo-1-[2-(2-nitro-styr-yl)-1-phenyl-sulfonyl-1H-indol-3-yl]ethanone.

Authors:  J Kanchanadevi; G Anbalagan; V Saravanan; A K Mohanakrishnan; B Gunasekaran; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-15

2.  2-Bromo-1-(1-phenyl-sulfonyl-1H-indol-3-yl)propan-1-one.

Authors:  C Ramathilagam; P R Umarani; V Saravanan; A K Mohanakrishnan; B Gunasekaran; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-15
  2 in total

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