| Literature DB >> 24759658 |
Alexandra Levitt, Ousmane M Diop, Rudolf H Tangermann, Fem Paladin, Jean Baptiste Kamgang, Cara C Burns, Paul J Chenoweth, Ajay Goel, Steven G F Wassilak.
Abstract
In 2012, the World Health Assembly of the World Health Organization (WHO) declared completion of polio eradication a programmatic emergency. Polio cases are detected through surveillance of acute flaccid paralysis (AFP) cases and subsequent testing of stool specimens for polioviruses (PVs) at WHO-accredited laboratories within the Global Polio Laboratory Network (GPLN). AFP surveillance is supplemented by environmental surveillance, testing sewage samples from selected sites for PVs. Virologic surveillance, including genomic sequencing to identify isolates by genotype and measure divergence between isolates, guides Global Polio Eradication Initiative (GPEI) activities by confirming the presence of PV, tracking chains of PV transmission, and highlighting gaps in AFP surveillance quality. This report provides AFP surveillance quality indicators at national and subnational levels during 2012-2013 for countries that experienced PV cases during 2009-2013 in the WHO African Region (AFR) and Eastern Mediterranean Region (EMR), the remaining polio-endemic regions. It also summarizes the results of environmental surveillance and reviews indicators assessing the timeliness of reporting of PV isolation and of virus strain characterization globally. Regional-level performance indicators for timely reporting of PV isolation were met in five of six WHO regions in 2012 and 2013. Of 30 AFR and EMR countries that experienced cases of PV (wild poliovirus [WPV], circulating vaccine-derived poliovirus [cVDPV], or both) during 2009-2013, national performance indicator targets for AFP surveillance and collection of adequate specimens were met in 27 (90%) countries in 2012 and 22 (73%) in 2013. In 17 (57%) countries, ≥80% of the population lived in subnational areas meeting both AFP performance indicators in 2012, decreasing to 13 (43%) in 2013. To achieve polio eradication and certify interruption of PV transmission, intensive efforts to strengthen and maintain AFP surveillance are needed at subnational levels, including in field investigation and prompt collection of specimens, particularly in countries with current or recent active PV transmission.Entities:
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Year: 2014 PMID: 24759658 PMCID: PMC4584778
Source DB: PubMed Journal: MMWR Morb Mortal Wkly Rep ISSN: 0149-2195 Impact factor: 17.586
National and subnational acute flaccid paralysis (AFP) surveillance indicators and number of confirmed wild poliovirus (WPV) and circulating vaccine-derived poliovirus (cVDPV) cases, among countries with poliovirus transmission during 2009–2013 within the African and Eastern Mediterranean regions of the World Health Organization (WHO) and regional indicators, 2012 and 2013.*
| WHO region/Country | 2012 | 2013 | ||||||||||||||
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| AFP cases | Regional/ National NPAFP rate | Subnational areas with NPAFP rate ≥2 (%) | Regional/ National AFP cases with adequate specimens | Subnational areas with ≥80% adequate specimens (%) | Population in areas meeting both subnational indicators | Confirmed WPV cases | Confirmed cVDPV cases | AFP cases | Regional/ National NPAFP rate | Subnational areas with NPAFP rate ≥2 (%) | Regional/ National AFP cases with adequate specimens | Subnational areas with ≥80% adequate specimens (%) | Population in areas meeting both subnational indicators | Confirmed WPV cases | Confirmed cVDPV cases | |
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| 18,075 | 4.8 | — | (90) | — | — | 128 | 40 | 20,264 | 5.3 | — | (91) | — | — | 80 | 13 |
| Angola | 319 | 3.1 | (94) | (92) | (100) | (98) | — | — | 310 | 2.9 | (89) | (92) | (94) | (79) | — | — |
| Benin | 153 | 3.6 | (92) | (92) | (92) | (87) | — | — | 180 | 4.3 | (100) | (91) | (92) | (95) | — | — |
| Burkina Faso | 321 | 4.0 | (93) | (89) | (100) | (100) | — | — | 292 | 3.7 | (86) | (85) | (71) | (65) | — | — |
| Burundi | 117 | 2.9 | (71) | (98) | (100) | (72) | — | — | 96 | 2.4 | (59) | (91) | (88) | (49) | — | — |
| Cameroon | 336 | 2.8 | (100) | (79) | (60) | (56) | — | — | 483 | 4.3 | (100) | (77) | (30) | (25) | 4 | 4 |
| CAR | 124 | 6.0 | (100) | (85) | (86) | (88) | — | — | 60 | 2.6 | (57) | (90) | (71) | (36) | — | |
| Chad | 418 | 6.7 | (100) | (82) | (67) | (67) | 5 | 12 | 500 | 8.6 | (100) | (82) | (56) | (56) | — | 4 |
| Côte d’Ivoire | 406 | 4.3 | (100) | (83) | (83) | (85) | — | — | 455 | 4.9 | (100) | (88) | (83) | (87) | — | — |
| DRC | 1,867 | 4.4 | (100) | (86) | (91) | (86) | — | 17 | 2,011 | 4.8 | (100) | (83) | (73) | (70) | — | — |
| Ethiopia | 1,156 | 2.8 | (91) | (85) | (55) | (69) | — | — | 1,164 | 2.8 | (64) | (71) | (9) | (0) | 9 | — |
| Gabon | 25 | 2.5 | (63) | (76) | (75) | (16) | — | — | 6 | 0.6 | (67) | (17) | (0) | (0) | — | — |
| Guinea | 187 | 3.3 | (100) | (97) | (100) | (100) | — | — | 224 | 4.0 | (100) | (54) | (0) | (0) | — | — |
| Kenya | 714 | 4.2 | (100) | (92) | (100) | (100) | — | 3 | 637 | 3.5 | (88) | (84) | (88) | (65) | 14 | — |
| Liberia | 56 | 3.2 | (73) | (100) | (100) | (70) | — | — | 50 | 2.9 | (80) | (98) | (100) | (86) | — | — |
| Mali | 266 | 3.4 | (75) | (94) | (88) | (92) | — | — | 243 | 3.1 | (88) | (88) | (88) | (96) | — | — |
| Mauritania | 78 | 5.7 | (100) | (95) | (100) | (100) | — | — | 58 | 4.2 | (100) | (93) | (85) | (90) | — | — |
| Mozambique | 320 | 3.1 | (100) | (89) | (100) | (100) | — | — | 333 | 3.3 | (100) | (89) | (80) | (85) | — | — |
| Niger | 368 | 4.3 | (88) | (80) | (50) | (55) | 1 | — | 338 | 4.1 | (100) | (75) | (25) | (8) | — | 1 |
| Nigeria | 7,239 | 8.7 | (100) | (95) | (97) | (96) | 122 | 8 | 8,641 | 10.5 | (100) | (96) | (100) | (100) | 53 | 4 |
| Republic of the Congo | 58 | 2.7 | (64) | (84) | (64) | (19) | — | — | 106 | 5.2 | (100) | (79) | (64) | (78) | — | — |
| Senegal | 160 | 2.7 | (73) | (81) | (55) | (50) | — | — | 231 | 3.7 | (91) | (68) | (18) | (7) | — | — |
| Sierra Leone | 168 | 6.3 | (75) | (95) | (100) | (79) | — | — | 171 | 6.4 | (60) | (92) | (100) | (79) | — | — |
| South Sudan | 325 | 4.3 | (100) | (95) | (90) | (97) | — | — | 295 | 3.8 | (90) | (94) | (90) | (87) | — | — |
| Togo | 94 | 2.9 | (100) | (97) | (100) | (100) | — | — | 155 | 4.7 | (100) | (85) | (83) | (87) | — | — |
| Uganda | 472 | 3.2 | (65) | (88) | (71) | (52) | — | — | 486 | 3.3 | (71) | (87) | (77) | (51) | — | — |
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| 11,119 | 5.2 | — | (91) | — | — | 95 | 28 | 11,520 | 5.2 | — | (90) | — | — | 327 | 50 |
| Afghanistan | 1,829 | 10.2 | (100) | (92) | (94) | (91) | 37 | 9 | 1,897 | 10.8 | (100) | (94) | (97) | (97) | 14 | 3 |
| Pakistan | 5,036 | 5.6 | (88) | (89) | (88) | (98) | 58 | 16 | 4,778 | 5.2 | (88) | (90) | (100) | (99) | 93 | 45 |
| Somalia | 148 | 2.8 | (79) | (98) | (100) | (56) | — | 1 | 546 | 6.4 | (100) | (88) | (89) | (93) | 194 | 1 |
| Syria | 109 | 1.1 | (15) | (85) | (62) | (10) | — | — | 171 | 1.3 | (15) | (64) | (38) | (4) | 25 | — |
| Yemen | 474 | 4.0 | (100) | (93) | (95) | (98) | — | 2 | 614 | 5.2 | (100) | (92) | (91) | (84) | — | 1 |
Abbreviations: NPAFP = nonpolio AFP; DRC = Democratic Republic of the Congo; CAR = Central African Republic.
Data as of March 25, 2014.
Regional NPAFP rates use United Nations Development Programme populations as denominators, and therefore tend to be higher than country rates, which use their summed subnational populations as denominators. Regional data available at http://apps.who.int/immunization_monitoring/en/diseases/poliomyelitis/case_count.cfm.
Per 100,000 persons aged <15 years.
Standard WHO target is adequate stool specimen collection from ≥80% of AFP cases, in which two specimens are collected within 14 days of paralysis onset ≥24 hours apart, shipped on ice or frozen ice packs and arriving in good condition in a WHO-accredited laboratory. Stool specimen adequacy proportions from regions do not include the criteria of good specimen condition or time between specimens.
For all subnational areas regardless of the population size.
Data at WHO as of April 1, 2014.
Data at WHO as of April 1, 2014; cVDPV are VDPV associated with two or more cases of AFP.
FIGURECombined performance indicators for the quality of acute flaccid paralysis (AFP) surveillance* in subnational areas (states and provinces) of 30 countries that were polio-affected during 2009–2013 — World Health Organization African and Eastern Mediterranean regions, 2013†
Abbreviation: NPAFP = nonpolio AFP.
* The Global Polio Eradication Initiative has set the following targets for countries with current or recent wild poliovirus transmission and their states/provinces: 1) NPAFP detection rate of two or more cases per 100,000 persons aged <15 years, and 2) adequate stool specimen collection from ≥80% of AFP cases, with specimen adequacy defined as two specimens collected ≥24 hours apart, both within 14 days of paralysis onset, shipped on ice or frozen packs, and arriving in good condition (without leakage or desiccation) at a World Health Organization–accredited laboratory.
† Data are for AFP cases with onset during 2013, reported as of March 31, 2014.
§ Per 100,000 persons aged >15 years.
Number of poliovirus (PV) isolates from stool specimens of persons with acute flaccid paralysis and timing of results, by World Health Organization (WHO) region, 2012 and 2013*
| WHO region | 2012 | 2013 | ||||||||||||
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| No. of specimens | No. of PV isolates | PV isolation results on time | ITD results within 7 days | ITD results within 60 days | No. of specimens | No. of PV isolates | PV isolation results on time | ITD results within 7 days | ITD results within 60 days | |||||
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| Wild | Sabin | cVDPV | Wild | Sabin | cVDPV | |||||||||
| African | 39,710 | 221 | 2,629 | 43 | (95) | (99) | (93) | 42,316 | 598 | 2,861 | 12 | (92) | (88) | (84) |
| Americas | 1,926 | 0 | 31 | 0 | (77) | (91) | (100) | 1,672 | 0 | 33 | 0 | (80) | (95) | (91) |
| Eastern Mediterranean | 26,626 | 174 | 930 | 71 | (94) | (99) | (99) | 20,783 | 125 | 626 | 53 | (99) | (98) | (97) |
| European | 3,167 | 0 | 66 | 2 | (96) | (75) | (88) | 3,404 | 0 | 37 | 0 | (99) | (93) | (86) |
| South-East Asia | 129,106 | 0 | 3,470 | 1 | (98) | (87) | (100) | 116,179 | 0 | 3,274 | 0 | (98) | (91) | (98) |
| Western Pacific | 15,094 | 0 | 223 | 8 | (98) | (93) | (84) | 13,304 | 0 | 241 | 0 | (65) | (100) | (99) |
| Total | 215,629 | 395 | 7,349 | 125 | (93) | (91) | (94) | 197,658 | 723 | 7,072 | 65 | (89) | (94) | (93) |
Abbreviations: cVDPV = circulating vaccine-derived poliovirus; ITD = intratypic differentiation.
Data as of April 1, 2014.
Either concordant Sabin-like results in ITD test and VDPV screening, or <1% sequence difference compared with Sabin vaccine virus (<0.6% for type 2).
For PV types 1 and 3, 10 or more VP1 nucleotide differences from the respective PV; for PV type 2, six or more VP1 nucleotide differences from Sabin type 2 PV.
Results reported within 14 days for laboratories in the following WHO regions: African, Americas, Eastern Mediterranean, South-East Asia, and Western Pacific
(28 days for China in 2012; change in procedures in China implemented during 2013 and 14 day criterion applied in 2013). Results reported within 28 days for the European Region.
Results of ITD reported within 7 days of receipt of specimen.
Results reported within 60 days of paralysis onset for all WHO regions except Eastern Mediterranean Region, which reported within 45 days of paralysis onset.