Literature DB >> 24757058

Neocortical Tet3-mediated accumulation of 5-hydroxymethylcytosine promotes rapid behavioral adaptation.

Xiang Li1, Wei Wei1, Qiong-Yi Zhao1, Jocelyn Widagdo1, Danay Baker-Andresen1, Charlotte R Flavell1, Ana D'Alessio2, Yi Zhang3, Timothy W Bredy4.   

Abstract

5-hydroxymethylcytosine (5-hmC) is a novel DNA modification that is highly enriched in the adult brain and dynamically regulated by neural activity. 5-hmC accumulates across the lifespan; however, the functional relevance of this change in 5-hmC and whether it is necessary for behavioral adaptation have not been fully elucidated. Moreover, although the ten-eleven translocation (Tet) family of enzymes is known to be essential for converting methylated DNA to 5-hmC, the role of individual Tet proteins in the adult cortex remains unclear. Using 5-hmC capture together with high-throughput DNA sequencing on individual mice, we show that fear extinction, an important form of reversal learning, leads to a dramatic genome-wide redistribution of 5-hmC within the infralimbic prefrontal cortex. Moreover, extinction learning-induced Tet3-mediated accumulation of 5-hmC is associated with the establishment of epigenetic states that promote gene expression and rapid behavioral adaptation.

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Year:  2014        PMID: 24757058      PMCID: PMC4024925          DOI: 10.1073/pnas.1318906111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  54 in total

1.  Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives.

Authors:  Cornelia G Spruijt; Felix Gnerlich; Arne H Smits; Toni Pfaffeneder; Pascal W T C Jansen; Christina Bauer; Martin Münzel; Mirko Wagner; Markus Müller; Fariha Khan; H Christian Eberl; Anneloes Mensinga; Arie B Brinkman; Konstantin Lephikov; Udo Müller; Jörn Walter; Rolf Boelens; Hugo van Ingen; Heinrich Leonhardt; Thomas Carell; Michiel Vermeulen
Journal:  Cell       Date:  2013-02-21       Impact factor: 41.582

2.  Tet1 is critical for neuronal activity-regulated gene expression and memory extinction.

Authors:  Andrii Rudenko; Meelad M Dawlaty; Jinsoo Seo; Albert W Cheng; Jia Meng; Thuc Le; Kym F Faull; Rudolf Jaenisch; Li-Huei Tsai
Journal:  Neuron       Date:  2013-09-18       Impact factor: 17.173

3.  TET1 controls CNS 5-methylcytosine hydroxylation, active DNA demethylation, gene transcription, and memory formation.

Authors:  Garrett A Kaas; Chun Zhong; Dawn E Eason; Daniel L Ross; Raj V Vachhani; Guo-Li Ming; Jennifer R King; Hongjun Song; J David Sweatt
Journal:  Neuron       Date:  2013-09-18       Impact factor: 17.173

4.  Dissociable roles of prelimbic and infralimbic cortices, ventral hippocampus, and basolateral amygdala in the expression and extinction of conditioned fear.

Authors:  Demetrio Sierra-Mercado; Nancy Padilla-Coreano; Gregory J Quirk
Journal:  Neuropsychopharmacology       Date:  2010-10-20       Impact factor: 7.853

5.  Genome-wide analysis reveals TET- and TDG-dependent 5-methylcytosine oxidation dynamics.

Authors:  Li Shen; Hao Wu; Dinh Diep; Shinpei Yamaguchi; Ana C D'Alessio; Ho-Lim Fung; Kun Zhang; Yi Zhang
Journal:  Cell       Date:  2013-04-18       Impact factor: 41.582

6.  Genome-wide profiling of 5-formylcytosine reveals its roles in epigenetic priming.

Authors:  Chun-Xiao Song; Keith E Szulwach; Qing Dai; Ye Fu; Shi-Qing Mao; Li Lin; Craig Street; Yujing Li; Mickael Poidevin; Hao Wu; Juan Gao; Peng Liu; Lin Li; Guo-Liang Xu; Peng Jin; Chuan He
Journal:  Cell       Date:  2013-04-18       Impact factor: 41.582

7.  Dynamics of 5-hydroxymethylcytosine and chromatin marks in Mammalian neurogenesis.

Authors:  Maria A Hahn; Runxiang Qiu; Xiwei Wu; Arthur X Li; Heying Zhang; Jun Wang; Jonathan Jui; Seung-Gi Jin; Yong Jiang; Gerd P Pfeifer; Qiang Lu
Journal:  Cell Rep       Date:  2013-02-09       Impact factor: 9.423

8.  TET3-OGT interaction increases the stability and the presence of OGT in chromatin.

Authors:  Ryo Ito; Shogo Katsura; Hiroki Shimada; Hikaru Tsuchiya; Masashi Hada; Tomoko Okumura; Akira Sugawara; Atsushi Yokoyama
Journal:  Genes Cells       Date:  2013-12-04       Impact factor: 1.891

9.  Global epigenomic reconfiguration during mammalian brain development.

Authors:  Ryan Lister; Eran A Mukamel; Joseph R Nery; Mark Urich; Clare A Puddifoot; Nicholas D Johnson; Jacinta Lucero; Yun Huang; Andrew J Dwork; Matthew D Schultz; Miao Yu; Julian Tonti-Filippini; Holger Heyn; Shijun Hu; Joseph C Wu; Anjana Rao; Manel Esteller; Chuan He; Fatemeh G Haghighi; Terrence J Sejnowski; M Margarita Behrens; Joseph R Ecker
Journal:  Science       Date:  2013-07-04       Impact factor: 47.728

10.  Tet1 regulates adult hippocampal neurogenesis and cognition.

Authors:  Run-Rui Zhang; Qing-Yan Cui; Kiyohito Murai; Yen Ching Lim; Zachary D Smith; Shengnan Jin; Peng Ye; Luis Rosa; Yew Kok Lee; Hai-Ping Wu; Wei Liu; Zhi-Mei Xu; Lu Yang; Yu-Qiang Ding; Fuchou Tang; Alexander Meissner; Chunming Ding; Yanhong Shi; Guo-Liang Xu
Journal:  Cell Stem Cell       Date:  2013-06-13       Impact factor: 25.269

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  98 in total

1.  Increased cocaine-induced conditioned place preference during periadolescence in maternally separated male BALB/c mice: the role of cortical BDNF, microRNA-212, and MeCP2.

Authors:  Thiago Wendt Viola; Luis Eduardo Wearick-Silva; Lucas Araújo De Azeredo; Anderson Centeno-Silva; Conor Murphy; Paul Marshall; Xiang Li; Nicolas Singewald; Frederico Garcia; Timothy W Bredy; Rodrigo Grassi-Oliveira
Journal:  Psychopharmacology (Berl)       Date:  2016-07-09       Impact factor: 4.530

Review 2.  Neuroepigenetic mechanisms underlying fear extinction: emerging concepts.

Authors:  Paul R Marshall; Timothy W Bredy
Journal:  Psychopharmacology (Berl)       Date:  2018-11-30       Impact factor: 4.530

3.  Cocaine shapes chromatin landscapes via Tet1.

Authors:  Anne E West
Journal:  Nat Neurosci       Date:  2015-04       Impact factor: 24.884

4.  Induction of DNA Hydroxymethylation Protects the Brain After Stroke.

Authors:  Kahlilia C Morris-Blanco; TaeHee Kim; Mary S Lopez; Mario J Bertogliat; Bharath Chelluboina; Raghu Vemuganti
Journal:  Stroke       Date:  2019-07-22       Impact factor: 7.914

Review 5.  Neuropathology of suicide: recent findings and future directions.

Authors:  P-E Lutz; N Mechawar; G Turecki
Journal:  Mol Psychiatry       Date:  2017-07-11       Impact factor: 15.992

6.  Dnmt3a2 in the Nucleus Accumbens Shell Is Required for Reinstatement of Cocaine Seeking.

Authors:  Nazzareno Cannella; Ana M M Oliveira; Thekla Hemstedt; Thomas Lissek; Elena Buechler; Hilmar Bading; Rainer Spanagel
Journal:  J Neurosci       Date:  2018-07-20       Impact factor: 6.167

Review 7.  Evidence from clinical and animal model studies of the long-term and transgenerational impact of stress on DNA methylation.

Authors:  Jennifer Blaze; Tania L Roth
Journal:  Semin Cell Dev Biol       Date:  2015-04-23       Impact factor: 7.727

8.  Developmental changes and sex differences in DNA methylation and demethylation in hypothalamic regions of the mouse brain.

Authors:  Carla D Cisternas; Laura R Cortes; Emily C Bruggeman; Bing Yao; Nancy G Forger
Journal:  Epigenetics       Date:  2019-08-03       Impact factor: 4.528

9.  DNA methylation dynamics underlie metamorphic gene regulation programs in Xenopus tadpole brain.

Authors:  Yasuhiro Kyono; Samhitha Raj; Christopher J Sifuentes; Nicolas Buisine; Laurent Sachs; Robert J Denver
Journal:  Dev Biol       Date:  2020-03-31       Impact factor: 3.582

10.  Maternal immune activation induces GAD1 and GAD2 promoter remodeling in the offspring prefrontal cortex.

Authors:  Marie Anaïs Labouesse; Erbo Dong; Dennis Robert Grayson; Alessandro Guidotti; Urs Meyer
Journal:  Epigenetics       Date:  2015       Impact factor: 4.528

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