| Literature DB >> 24755993 |
J M Bakker1, R Lieverse1, C Menne-Lothmann1, W Viechtbauer1, E Pishva1, G Kenis1, N Geschwind2, F Peeters1, J van Os3, M Wichers1.
Abstract
Positive affect (PA) has an important role in resilience against depression and has been shown to increase with mindfulness-based cognitive therapy (MBCT). To elucidate the underlying mechanisms of change in PA as well as develop insights that may benefit personalized medicine, the current study examined the contribution of genetic variation to individual differences in change in PA in response to MBCT. Individuals (n=126) with residual depressive symptoms were randomized to either an MBCT group or treatment as usual. PA was assessed using experience sampling methodology (ESM). Single-nucleotide polymorphisms (SNPs) in genes known to be involved in reward functioning were selected. SNPs in the genes for brain-derived neurotrophic factor (BDNF), the muscarinic acetylcholine receptor M2 (CHRM2), the dopamine receptor D4 (DRD4) and the μ1 opioid receptor (OPRM1) significantly moderated the impact of treatment condition over time on PA. Genetic variation in the genes for CHRM2 and OPRM1 specifically had an impact on the level of PA following MBCT. The current study shows that variation in response to MBCT may be contingent on genetic factors associated with the regulation of PA. These findings contribute to our understanding of the processes moderating response to treatment and prediction of treatment outcome.Entities:
Mesh:
Year: 2014 PMID: 24755993 PMCID: PMC4012287 DOI: 10.1038/tp.2014.23
Source DB: PubMed Journal: Transl Psychiatry ISSN: 2158-3188 Impact factor: 6.222
Overview of selected SNPs
| rs6265 | G/G (78); A/G (43); A/A (5) | 11p13 | Missense | G/A | Val66Met | Licinio | 1.00 | 0.262 | |
| rs11030101 | A/A (36); T/A (63); T/T (27) | 11p13 | UTR-5 | A/T | Licinio | 1.00 | 0.109 | ||
| rs11030102 | C/C (76); G/C (43); G/G (7) | 11p13 | NearGene-5 | C/G | Licinio | 1.00 | 0.004 | ||
| rs11030103 | Design failure | 11p13 | NearGene-5 | G/A | Licinio | / | / | ||
| rs12273539 | No variation | 11p13 | Intronic | T/C | Licinio | 1.00 | / | ||
| rs28722151 | *Suspected* | 11p13 | UTR-5 | C/G | Licinio | / | / | ||
| rs56820186 | Design failure | 11p13 | UTR-3 | G/T | Licinio | / | / | ||
| rs57083135 | Too little variation | 11p13 | NearGene-5 | C/T | Licinio | 1.00 | 0.031 | ||
| rs4633 | C/C (31); C/T (63); T/T (32) | 22q11.21 | Synonymous | C/T | Diatschenko | 1.00 | 0.009 | ||
| rs4680 | G/G (31); G/A (63); A/A (32) | 22q11.21 | Missense | G/A | Val158Met | Diatschenko | 1.00 | 0.009 | |
| rs4818 | C/C (41); C/G (64); G/G (21) | 22q11.21 | Synonymous | C/G | Diatschenko | 1.00 | 0.362 | ||
| rs6267 | No variation | 22q11.21 | Missense | G/T | Ala72Ser | Diatschenko | 1.00 | / | |
| rs6269 | A/A (39); A/G (65); G/G (22) | 22q11.21 | NearGene-5 | A/G | Diatschenko | 1.00 | 0.479 | ||
| rs324650 | A/A (36); T/A (68); T/T (22) | 7q31-q35 | Intronic | A/T | Wang | 1.00 | 0.762 | ||
| rs1824024 | T/T (56); G/T (50); G/G (20) | 7q31-q35 | Intronic | G/T | Wang | 1.00 | 1.649 | ||
| rs2061174 | T/T (58); T/C (51); C/C (17) | 7q31-q35 | Intronic | C/T | Wang | 1.00 | 0.717 | ||
| rs6276 | A/A (63); G/A (54); G/G (9) | 11q23 | UTR-3 | A/G | A1385G | Kraschewski | 1.00 | 0.188 | |
| rs6277 | T/T (38); C/T (63); C/C (25) | 11q23 | Synonymous | C/T | C957T | Kraschewski | 1.00 | 0.002 | |
| rs1799732 | Design failure | 11q23 | NearGene-5 | −/C | −141C del | Kraschewski | / | / | |
| rs747302 | Genotyping failure | 11p15.5 | NearGene-5 | C/G | C616G | Ben Zion | 0.06 | / | |
| rs936461 | G/G (58); G/A (53); A/A (15) | 11p15.5 | NearGene-5 | A/G | A809G | Ben Zion | 1.00 | 0.048 | |
| rs1800955 | Too little variation | 11p15.5 | NearGene-5 | C/T | C521T | Ben Zion | 0.93 | 5.165 | |
| rs1799836 | Multivariable SNP | Xp11.23 | Intronic | A/G | B-SNP 13 | Balciuniene | / | / | |
| rs495491 | T/T (65); T/C (48); C/C (13) | 6q24-q25 | Intronic | C/T | Zhang | 1.00 | 0.938 | ||
| rs609148 | C/C (75); C/T (44); T/T (7) | 6q24-q25 | Intronic | C/T | Zhang | 1.00 | 0.068 | ||
| rs648893 | T/T (75); C/T (44); C/C (7) | 6q24-q25 | Intronic | C/T | Zhang | 1.00 | 0.068 | ||
| rs1799971 | Too little variation | 6q24-q25 | Missense | A/G | Asn40Asp 118 A/G | Zhang | 1.00 | 0.004 | |
| rs3823010 | A/A (83); A/G (37); G/G (6) | 6q24-q25 | Intronic | A/G | Zhang | 1.00 | 0.484 | ||
| rs563649 | Too little variation | 6q24-q25 | UTR-5 | A/G | Shabalina | 1.00 | 0.038 | ||
| rs6347 | A/A (68); A/G (49); G/G (9) | 5p15.3 | Synonymous | A/G | Ex2+159 C>T | Azzato | 1.00 | 0.006 | |
| rs6350 | Too little variation | 5p15.3 | Synonymous | C/T | −3714G>T | Azzato | 1.00 | 0.607 | |
| rs6413429 | Too little variation | 5p15.3 | NearGene-5 | G/T | Ex9–55A>G | Azzato | 1.00 | 0.853 |
Abbreviations: BDNF, brain-derived neurotrophic factor; CHRM2, cholinergic receptor muscarinic 2; COMT, catechol-O-methyltransferase; DRD2, dopamine receptor D2; DRD4, dopamine receptor D4; ESM, experience sampling methodology; OPRM1, μ1 opioid receptor; SLC6A3, dopamine transporter; SNP, single nucleotide length polymorphism; UTR, untranslated repeat. Note: call rates and X2 values of Hardy–Weinberg (HWχ2) equilibrium (both calculated on n=131; including five participants without ESM data) are indicated. SNPs with a callrate <0.90 (genotyping failure); no or too little variation (two or more genotypes with less than 30 subjects); or a X2 value above 10.83 (marked with *, corresponding with a P-value <0.001) were excluded from analyses.
Correlation coefficients between SNPs
| rs6265 | 1.00 | |||||||||||||||||
| rs11030101 | 1.00 | |||||||||||||||||
| rs11030102 | 1.00 | |||||||||||||||||
| rs4633 | −0.08 | 1.00 | ||||||||||||||||
| rs4680 | −0.08 | 1.00 | ||||||||||||||||
| rs4818 | 0.07 | −0.11 | 0.08 | 1.00 | ||||||||||||||
| rs6269 | 0.08 | −0.12 | 0.09 | 1.00 | ||||||||||||||
| rs324650 | −0.01 | 0.07 | −0.08 | 1.00 | ||||||||||||||
| rs1824024 | 0.02 | −0.03 | −0.09 | −0.02 | −0.02 | 0.06 | 0.06 | 1.00 | ||||||||||
| rs2061174 | 0.06 | −0.02 | −0.03 | −0.03 | 0.05 | 0.05 | 1.00 | |||||||||||
| rs6276 | −0.02 | −0.03 | 1.00 | |||||||||||||||
| rs6277 | −0.04 | −0.05 | −0.07 | −0.08 | −0.05 | −0.07 | 1.00 | |||||||||||
| rs936461 | 0.09 | −0.04 | 0.03 | 0.03 | 0.03 | 0.03 | 0.16 | 0.08 | 0.07 | 1.00 | ||||||||
| rs495491 | 0.04 | 0.01 | −0.05 | −0.03 | −0.03 | −0.02 | 0.00 | −0.06 | 0.02 | −0.03 | −0.06 | −0.05 | 1.00 | |||||
| rs609148 | −0.06 | 0.03 | 0.01 | −0.01 | −0.01 | 0.00 | 0.01 | −0.04 | −0.01 | 1.00 | ||||||||
| rs648893 | −0.06 | 0.03 | 0.01 | −0.01 | −0.01 | 0.00 | 0.01 | −0.04 | −0.01 | −0.09 | 1.00 | |||||||
| rs3823010 | 0.09 | 0.09 | −0.06 | −0.01 | 0.02 | −0.06 | 0.04 | 0.02 | −0.06 | −0.07 | 1.00 | |||||||
| rs6347 | 0.00 | −0.04 | −0.04 | 0.06 | 0.05 | 0.01 | −0.01 | −0.02 | −0.01 | −0.01 | 1.00 |
Note: The size of the Pearson correlation coefficients (that is, small, medium or strong correlation) are indicated as follows: r =0.1–0.3 (small, shown in italics), r =0.3–0.5 (medium, shown as underlined) and r =0.5–1.0 (strong, shown in bold).
Unstandardized effect sizes (s.e.) of the group × time × SNP interaction and their P-values
| P | |||
|---|---|---|---|
| rs6265 | −0.067 (0.082) | 0.415 | |
| rs11030101 | 0.274 (0.089) | 0.002 | |
| rs11030102 | 0.128 (0.081) | 0.112 | |
| rs4680 | (a) 0.204 (0.097) (b) −0.049 (0.110) (c) −0.254 (0.092) | 0.0360.6560.006 | |
| rs4818 | −0.063 (0.085) | 0.461 | |
| rs6269 | −0.104 (0.086) | 0.229 | |
| rs324650 | −0.206 (0.087) | 0.018 | |
| rs1824024 | −0.259 (0.083) | 0.002 | |
| rs6276 | −0.206 (0.079) | 0.010 | |
| rs6277 | −0.156 (0.090) | 0.082 | |
| rs936461 | 0.426 (0.082) | 0.000 | |
| rs495491 | OPRM1 | 0.372 (0.081) | 0.000 |
| rs609148 | OPRM1 | 0.647 (0.083) | 0.000 |
| rs6347 | −0.209 (0.081) | 0.009 |
Abbreviations: BDNF, brain-derived neurotrophic factor; CHRM2, cholinergic receptor muscarinic 2; COMT, catechol-O-methyltransferase; DRD2, dopamine receptor D2; DRD4, dopamine receptor D4; OPRM1, μ1 opioid receptor; SLC6A3, dopamine transporter; SNP, single nucleotide length polymorphism.
Note: the most common homozygotic genotype is the reference category (except for rs4680, of which the homozygote of the non-risk allele is the reference category); (a) tests group 1 to 0 (heterozygotic genotype to homozygote of non-risk allele), (b) tests group 2 to 0 (homozygote of risk-allele to homozygote of non-risk allele), (c) tests group 2 to 1 (homozygote of risk-allele to heterozygotic genotype).
Indicates a significant result, that is when P-values are ordered from smallest P1 to largest Pn, Pi ⩽α/(n−i+1), following Holm's method for correcting for multiple testing.[54,55]
rs4680 is perfectly correlated with rs4633 and highly correlated with rs4818 and rs6269.
rs1824024 is highly correlated with rs2061174.
rs495491 is highly correlated with rs3823010.
rs609148 is perfectly correlated with rs648893.
Figure 1Standardized predicted vales of PA (y axis) per combination of group (control/MBCT), assessment time (baseline/post) and SNP genotype for significant interaction effects only; controlled for the mean baseline PA, gender and age. Follow-up analyses were performed to test whether the change in PA from baseline to post intervention within a group (control/MBCT) differed per genotype: *P⩽0.05; **P⩽0.01; ***P⩽0.001. CB, baseline measurement in control group; CP, post assessment in the control group; MB, baseline measurement in the MBCT group; MP, post assessment in the MBCT group; PA, positive effect.
Figure 2Standardized predicted vales of 17-item Hamilton Depression Rating Scale (HDRS) score (y axis) per combination of group (control/MBCT), assessment time (baseline/post) and SNP genotype; controlled for gender and age. CB, baseline measurement in control group; CP, post assessment in the control group; MB, baseline measurement in the MBCT group; MP, post assessment in the MBCT group.