Literature DB >> 24747356

Visualization and analytics tools for infectious disease epidemiology: a systematic review.

Lauren N Carroll1, Alan P Au2, Landon Todd Detwiler3, Tsung-Chieh Fu4, Ian S Painter5, Neil F Abernethy6.   

Abstract

BACKGROUND: A myriad of new tools and algorithms have been developed to help public health professionals analyze and visualize the complex data used in infectious disease control. To better understand approaches to meet these users' information needs, we conducted a systematic literature review focused on the landscape of infectious disease visualization tools for public health professionals, with a special emphasis on geographic information systems (GIS), molecular epidemiology, and social network analysis. The objectives of this review are to: (1) identify public health user needs and preferences for infectious disease information visualization tools; (2) identify existing infectious disease information visualization tools and characterize their architecture and features; (3) identify commonalities among approaches applied to different data types; and (4) describe tool usability evaluation efforts and barriers to the adoption of such tools.
METHODS: We identified articles published in English from January 1, 1980 to June 30, 2013 from five bibliographic databases. Articles with a primary focus on infectious disease visualization tools, needs of public health users, or usability of information visualizations were included in the review.
RESULTS: A total of 88 articles met our inclusion criteria. Users were found to have diverse needs, preferences and uses for infectious disease visualization tools, and the existing tools are correspondingly diverse. The architecture of the tools was inconsistently described, and few tools in the review discussed the incorporation of usability studies or plans for dissemination. Many studies identified concerns regarding data sharing, confidentiality and quality. Existing tools offer a range of features and functions that allow users to explore, analyze, and visualize their data, but the tools are often for siloed applications. Commonly cited barriers to widespread adoption included lack of organizational support, access issues, and misconceptions about tool use. DISCUSSION AND
CONCLUSION: As the volume and complexity of infectious disease data increases, public health professionals must synthesize highly disparate data to facilitate communication with the public and inform decisions regarding measures to protect the public's health. Our review identified several themes: consideration of users' needs, preferences, and computer literacy; integration of tools into routine workflow; complications associated with understanding and use of visualizations; and the role of user trust and organizational support in the adoption of these tools. Interoperability also emerged as a prominent theme, highlighting challenges associated with the increasingly collaborative and interdisciplinary nature of infectious disease control and prevention. Future work should address methods for representing uncertainty and missing data to avoid misleading users as well as strategies to minimize cognitive overload.
Copyright © 2014 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Disease surveillance; GIS; Infectious disease; Public health; Social network analysis; Visualization

Mesh:

Year:  2014        PMID: 24747356      PMCID: PMC5734643          DOI: 10.1016/j.jbi.2014.04.006

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  107 in total

1.  Distribution of Epi Info software: an evaluation using the Internet.

Authors:  B Harbage; A G Dean
Journal:  Am J Prev Med       Date:  1999-05       Impact factor: 5.043

2.  New frontiers for health information systems using Epi Info in developing countries: structured application framework for Epi Info (SAFE).

Authors:  J Ma; M Otten; R Kamadjeu; R Mir; L Rosencrans; S McLaughlin; S Yoon
Journal:  Int J Med Inform       Date:  2007-03-21       Impact factor: 4.046

3.  "To me it's just another tool to help understand the evidence": public health decision-makers' perceptions of the value of geographical information systems (GIS).

Authors:  Kerry Joyce
Journal:  Health Place       Date:  2009-02-08       Impact factor: 4.078

Review 4.  Bacterial strain typing.

Authors:  Duncan MacCannell
Journal:  Clin Lab Med       Date:  2013-09       Impact factor: 1.935

Review 5.  Learning from research on the information behaviour of healthcare professionals: a review of the literature 2004-2008 with a focus on emotion.

Authors:  Ina Fourie
Journal:  Health Info Libr J       Date:  2009-09

6.  Free and simple GIS as appropriate for health mapping in a low resource setting: a case study in eastern Indonesia.

Authors:  Rohan P Fisher; Bronwyn A Myers
Journal:  Int J Health Geogr       Date:  2011-02-25       Impact factor: 3.918

7.  Task analysis in action: the role of information systems in communicable disease reporting.

Authors:  Jamie Pina; Anne Turner; Tao Kwan-Gett; Jeff Duchin
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

8.  A tuberculosis outbreak in a private-home family child care center in San Francisco, 2002 to 2004.

Authors:  Puneet K Dewan; Houmpheng Banouvong; Neil Abernethy; Thomas Hoynes; Liliana Diaz; Melaku Woldemariam; Theresa Ampie; Jennifer Grinsdale; L Masae Kawamura
Journal:  Pediatrics       Date:  2006-03       Impact factor: 7.124

9.  A comprehensive mapping of HIV-1 genotypes in various risk groups and regions across China based on a nationwide molecular epidemiologic survey.

Authors:  Xiang He; Hui Xing; Yuhua Ruan; Kunxue Hong; Chunlin Cheng; Yuanyuan Hu; Ruolei Xin; Jing Wei; Yi Feng; Jenny H Hsi; Yutaka Takebe; Yiming Shao
Journal:  PLoS One       Date:  2012-10-08       Impact factor: 3.240

10.  Visualization techniques and graphical user interfaces in syndromic surveillance systems. Summary from the Disease Surveillance Workshop, Sept. 11-12, 2007; Bangkok, Thailand.

Authors:  Kieran M Moore; Graham Edge; Andrew R Kurc
Journal:  BMC Proc       Date:  2008-11-14
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  53 in total

1.  Feasibility of Population Health Analytics and Data Visualization for Decision Support in the Infectious Diseases Domain: A pilot study.

Authors:  Don Roosan; Guilherme Del Fiol; Jorie Butler; Yarden Livnat; Jeanmarie Mayer; Matthew Samore; Makoto Jones; Charlene Weir
Journal:  Appl Clin Inform       Date:  2016-06-29       Impact factor: 2.342

2.  Understanding Discussions of Health Issues on Twitter: A Visual Analytic Study.

Authors:  Oluwakemi Ola; Kamran Sedig
Journal:  Online J Public Health Inform       Date:  2020-05-16

3.  Interactive visualization of public health indicators to support policymaking: An exploratory study.

Authors:  Moutasem Zakkar; Kamran Sedig
Journal:  Online J Public Health Inform       Date:  2017-09-08

4.  Accuracy of name and age data provided about network members in a social network study of people who use drugs: implications for constructing sociometric networks.

Authors:  April M Young; Abby E Rudolph; Amanda E Su; Lee King; Susan Jent; Jennifer R Havens
Journal:  Ann Epidemiol       Date:  2016-10-05       Impact factor: 3.797

5.  Visualization of Data Regarding Infections Using Eye Tracking Techniques.

Authors:  Sunmoo Yoon; Bevin Cohen; Kenrick D Cato; Jianfang Liu; Elaine L Larson
Journal:  J Nurs Scholarsh       Date:  2016-04-07       Impact factor: 3.176

6.  Clinical Complexity in Medicine: A Measurement Model of Task and Patient Complexity.

Authors:  R Islam; C Weir; G Del Fiol
Journal:  Methods Inf Med       Date:  2015-09-25       Impact factor: 2.176

7.  Social Network Analysis of Patient Movement Across Health Care Entities in Orange County, Florida.

Authors:  Danielle A Rankin; Sarah D Matthews
Journal:  Public Health Rep       Date:  2020-06-08       Impact factor: 2.792

8.  Detecting space-time clusters of COVID-19 in Brazil: mortality, inequality, socioeconomic vulnerability, and the relative risk of the disease in Brazilian municipalities.

Authors:  M R Martines; R V Ferreira; R H Toppa; L M Assunção; M R Desjardins; E M Delmelle
Journal:  J Geogr Syst       Date:  2021-03-08

9.  OUTBREAK: a user-friendly georeferencing online tool for disease surveillance.

Authors:  Raúl Arias-Carrasco; Jeevan Giddaluru; Lucas E Cardozo; Felipe Martins; Vinicius Maracaja-Coutinho; Helder I Nakaya
Journal:  Biol Res       Date:  2021-07-08       Impact factor: 5.612

10.  Predicting Spatial Patterns of Sindbis Virus (SINV) Infection Risk in Finland Using Vector, Host and Environmental Data.

Authors:  Ruut Uusitalo; Mika Siljander; C Lorna Culverwell; Guy Hendrickx; Andreas Lindén; Timothée Dub; Juha Aalto; Jussi Sane; Cedric Marsboom; Maija T Suvanto; Andrea Vajda; Hilppa Gregow; Essi M Korhonen; Eili Huhtamo; Petri Pellikka; Olli Vapalahti
Journal:  Int J Environ Res Public Health       Date:  2021-07-01       Impact factor: 3.390

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