| Literature DB >> 24742541 |
John W Elrod1, Jop H van Berlo2.
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Year: 2014 PMID: 24742541 PMCID: PMC4413011 DOI: 10.1016/j.yjmcc.2014.03.014
Source DB: PubMed Journal: J Mol Cell Cardiol ISSN: 0022-2828 Impact factor: 5.000
Fig. 1Screening approach to identify new regulatory pathways governing diverse types of cardiomyocyte hypertrophy. Neonatal rat cardiomyocytes (NRCM) were isolated, plated in 96-well plates and transfected with a troponin-T GFP reporter. Two days after transfection, 15 different hypertrophic agonists, at three different doses, were delivered individually to individual wells. 48 h after stimulation, automated microscopy was performed and individual NRCMs were analyzed for a transformation in shape. Cells were measured for changes in area, form factor (a measurement of circularity), elongation, perimeter, and also for GFP fluorescence intensity. Immediately following imaging, RNA was isolated and the expression of 12 different genes was examined by qPCR. Next, computational analysis was performed and the data was clustered into input and output modules. Using this approach the authors were able to discover novel pathways for hypothesis-based experimentation.