Literature DB >> 24739169

Water-peptide site-specific interactions: a structural study on the hydration of glutathione.

Ernesto Scoppola1, Armida Sodo1, Sylvia E McLain2, Maria Antonietta Ricci1, Fabio Bruni3.   

Abstract

Water-peptide interactions play an important role in determining peptide structure and function. Nevertheless, a microscopic description of these interactions is still incomplete. In this study we have investigated at the atomic scale length the interaction between water and the tripeptide glutathione. The rationale behind this work, based on the combination between a neutron diffraction experiment and a computer simulation, is twofold. It extends previous studies on amino acids, addressing issues such as the perturbation of the water network brought by a larger biomolecule in solution. In addition, and more importantly, it seeks a possible link between the atomic length scale description of the glutathione-water interaction with the specific biological functionality of glutathione, an important intracellular antioxidant. Results indicate a rather weak hydrogen bond between the thiol (-SH) group of cysteine and its first neighbor water molecule. This -SH group serves as a proton donor, is responsible for the biological activity of glutathione, and it is involved in the formation of glutathione disulfide, the oxidized form of glutathione. Moreover, the hydration shell of the chemically identical carboxylate group on the glutamic acid residue and on the glycine residue shows an intriguing different spatial location of water molecules and coordination numbers around the two CO2(-) groups.
Copyright © 2014 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 24739169      PMCID: PMC4008841          DOI: 10.1016/j.bpj.2014.01.046

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  24 in total

1.  Is the first hydration shell of lysozyme of higher density than bulk water?

Authors:  Franci Merzel; Jeremy C Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

2.  More than one dynamic crossover in protein hydration water.

Authors:  Marco G Mazza; Kevin Stokely; Sara E Pagnotta; Fabio Bruni; H Eugene Stanley; Giancarlo Franzese
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-30       Impact factor: 11.205

3.  Hydration of sodium, potassium, and chloride ions in solution and the concept of structure maker/breaker.

Authors:  R Mancinelli; A Botti; F Bruni; M A Ricci; A K Soper
Journal:  J Phys Chem B       Date:  2007-11-08       Impact factor: 2.991

4.  Viscosity of aqueous solutions and local microscopic structure.

Authors:  T Corridoni; R Mancinelli; M A Ricci; F Bruni
Journal:  J Phys Chem B       Date:  2011-08-23       Impact factor: 2.991

5.  Structure and water dynamics of aqueous peptide solutions in the presence of co-solvents.

Authors:  Cecile Malardier-Jugroot; Daniel T Bowron; Alan K Soper; Margaret E Johnson; Teresa Head-Gordon
Journal:  Phys Chem Chem Phys       Date:  2009-11-20       Impact factor: 3.676

Review 6.  Molecular recognition and ligand association.

Authors:  Riccardo Baron; J Andrew McCammon
Journal:  Annu Rev Phys Chem       Date:  2013-03-05       Impact factor: 12.703

7.  Structural studies on the hydration of L-glutamic acid in solution.

Authors:  Sylvia E McLain; Alan K Soper; Anthony Watts
Journal:  J Phys Chem B       Date:  2006-10-26       Impact factor: 2.991

8.  Atomic and residue hydrophilicity in the context of folded protein structures.

Authors:  L A Kuhn; C A Swanson; M E Pique; J A Tainer; E D Getzoff
Journal:  Proteins       Date:  1995-12

9.  The hydration of amides in helices; a comprehensive picture from molecular dynamics, IR, and NMR.

Authors:  Scott T R Walsh; Richard P Cheng; Wayne W Wright; Darwin O V Alonso; Valerie Daggett; Jane M Vanderkooi; William F DeGrado
Journal:  Protein Sci       Date:  2003-03       Impact factor: 6.725

10.  The hydrogen-bonding ability of the amino acid glutamine revealed by neutron diffraction experiments.

Authors:  N H Rhys; A K Soper; L Dougan
Journal:  J Phys Chem B       Date:  2012-10-31       Impact factor: 2.991

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  4 in total

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Journal:  J Chem Inf Model       Date:  2019-03-22       Impact factor: 4.956

Review 2.  Structural Analysis of Molecular Materials Using the Pair Distribution Function.

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Journal:  Chem Rev       Date:  2021-11-17       Impact factor: 60.622

3.  Nanostructured Coating for Biomaterial Lubrication through Biomacromolecular Recruitment.

Authors:  Hongping Wan; Xinghong Zhao; Chengxiong Lin; Hans Jan Kaper; Prashant Kumar Sharma
Journal:  ACS Appl Mater Interfaces       Date:  2020-05-12       Impact factor: 9.229

4.  Hydration of Carboxyl Groups: A Route toward Molecular Recognition?

Authors:  Michael Di Gioacchino; Fabio Bruni; Silvia Imberti; Maria Antonietta Ricci
Journal:  J Phys Chem B       Date:  2020-05-18       Impact factor: 2.991

  4 in total

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