| Literature DB >> 24729918 |
Shiva D Rahmanian1, Karen L Wood2, Shili Lin3, Mark A King4, April Horne5, Shangbin Yang5, Haifeng M Wu5, Philip T Diaz1.
Abstract
Background. HIV-infected subjects have an increased incidence of pulmonary emphysema. There are known gender differences in COPD phenotypic expression and diagnosis, but this is not well characterized in lung disease related to HIV. We analyzed a group at risk for the development of COPD (HIV-infected smokers) to determine gender differences in pulmonary symptoms, pulmonary function tests, and HRCT appearances. Methods. This was a cross-sectional, baseline analysis of a prospective study performed between 2006 and 2010. We performed symptomatic, pulmonary function, and computed tomography assessments in 243 HIV-infected smokers. In a subset bronchoalveolar lavage was performed with proteomic analysis of their alveolar macrophages. Results. The majority of the participants were male 213 (87.6%). There was significantly higher percentage of cough and phlegm production in males. There was also a lower FEV1 and a higher RV in males than females. Proteomic analysis revealed 29 proteins with at least a 2-fold higher expression in males and 13 identified proteins that were higher in females. Conclusions. In this group of HIV-infected smokers, airway symptoms and pulmonary function test abnormalities were higher in men than women. These gender differences may be due to differential expression of certain proteins in this group.Entities:
Year: 2014 PMID: 24729918 PMCID: PMC3960768 DOI: 10.1155/2014/613689
Source DB: PubMed Journal: Scientifica (Cairo) ISSN: 2090-908X
Baseline demographics of the study participants.
| Demographics | All subjects |
|---|---|
| Subject number | 243 |
| Male number (%) | 213 (87.6%) |
| Female number (%) | 30 (12.3%) |
| Age, mean (std dev) | 44.3 (8.4) |
| BMI, mean (std dev) | 26.98 (8.35) |
| Race | |
| Caucasian (%) | 40.7 |
| African American (%) | 57.6 |
| Other (%) | 1.7 |
| IV drug use number (%) | 43 (17.7%) |
| Current smokers number (%) | 157 (64.6%) |
| Pack years, mean (std dev) | 19 ± 20.1 |
| CD4 count, mean (std dev) | 473.85 ± 284.80 |
| Viral load, mean (std dev) | 36552.43 ± 118323.6 |
Comparison of sex differences in respiratory symptoms, chest CT findings, and pulmonary function testing.
| Male | Female | Odds ratio/regression coefficient |
| |
|---|---|---|---|---|
| Symptoms | ||||
| Cough (%) | 72.8 | 51.7 | 4.33 | 0.0015 |
| Phlegm (%) | 71.2 | 51.7 | 2.68 | 0.025 |
| Shortness of breath (%) | 32.4 | 44.8 | 1.08 | 0.87 |
| Wheeze (%) | 49.8 | 55.2 | 1.06 | 0.89 |
| CT chest findings | ||||
| Emphysema (%) | 45.8 | 33.3 | 1.51 | 0.39 |
| Bronchial dilatation (%) | 22.2 | 16.6 | 1.21 | 0.73 |
| Air trapping (%) | 29.1 | 22.2 | 2.62 | 0.083 |
| Bronchial wall thickening (%) | 16.5 | 13.3 | 1.11 | 0.86 |
| Pulmonary function testing | ||||
| FEV1/FVC | 76.3 | 78.3 | −1.48 | 0.40 |
| FEV1% predicted | 91.4 | 97.3 | −8.35 | 0.0086 |
| RV% predicted | 115.1 | 99.4 | 0.116* | 0.0496 |
| TLC% predicted | 103.5 | 99.8 | 2.57 | 0.42 |
| DLCO% predicted | 79.9 | 75.5 | 4.35 | 0.19 |
*The regression coefficient for RV% predicted is in the log scale.
Clinical characteristics of subjects undergoing bronchoalveolar lavage with alveolar macrophage proteomic analysis.
| Gender | HAART | Current smoker | Pack years | Age | Race |
|---|---|---|---|---|---|
| F | Y | N | 1 | 37 | W |
| F | Y | Y | 31 | 47 | W |
| F | Y | Y | 16 | 48 | B |
| F | Y | Y | 6 | 47 | B |
| F | Y | Y | 11 | 33 | W |
| F | Y | Y | 28 | 52 | W |
| M | Y | N | 1 | 50 | W |
| M | Y | Y | 36 | 42 | W |
| M | Y | Y | 11 | 44 | B |
| M | Y | Y | 11 | 51 | B |
| M | Y | Y | 14 | 34 | W |
| M | Y | Y | 29 | 45 | W |
Proteins that had at least a 2-fold higher expression in alveolar macrophages from men.
| Spot | Mean of normalized | Mean of normalized | Fold changes | Accession number | Protein ID | Mowse | Observed pI/Mr | Number of peptides | Total seq. |
|---|---|---|---|---|---|---|---|---|---|
| 867 | 0.04867 | 0.02083 | 2.34 | NP_006079 | Tubulin, beta, 2 | 2103 | 5.0/53.3 | 8 | 62 |
| 1009 | 0.05650 | 0.02167 | 2.61 | BAD96752 | Beta-actin variant | 471 | 7.5/45.1 | 8 | 31 |
| 1318 | 0.12600 | 0.02983 | 4.22 | P11177 | Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 427 | 6.2/39.6 | 4 | 39 |
| 1773 | 0.22083 | 0.06217 | 3.55 | NP_001900 | Cathepsin D preproprotein | 898 | 5.2/27.7 | 5 | 33 |
| 1802 | 0.06200 | 0.03067 | 2.02 | P30041 | Peroxiredoxin 6 | 364 | 6.0/27.4 | 7 | 76 |
| 1872 | 0.05017 | 0.01600 | 3.14 | P25787 | Proteasome subunit alpha type 2 | 265 | 6.6/25.7 | 6 | 76 |
| 3074 | 0.17217 | 0.07350 | 2.34 | 1IVY_A | Chain A, Physiological Dimer Hpp Precursor | 230 | 4.5/29.4 | 3 | 9 |
| 3157 | 0.06600 | 0.03250 | 2.03 | P05092 | Cyclophilin A | 206 | 6.4/16.4 | 3 | 52 |
| 3235 | 0.11967 | 0.01050 | 11.40 | P11021 | 78 kDa glucose-regulated protein | 2193 | 5.3/74.9 | 24 | 50 |
| 4880 | 0.09550 | 0.00567 | 16.85 | CAA68491 | Glutathione peroxidase | 1143 | 5.5/23.6 | 4 | 89 |
| 4925 | 0.12867 | 0.00100 | 128.67 | P26447 | Protein S100-A4 | 208 | 5.9/11.9 | 5 | 45 |
| 4990 | 0.11867 | 0.01933 | 6.14 | P00558 | Phosphoglycerate kinase 1 | 2011 | 7.9/44.9 | 13 | 72 |
| 5173 | 0.11133 | 0.03450 | 3.23 | P30048 | Thioredoxin-dependent peroxide reductase, mitochondrial | 204 | 7.7/28.0 | 3 | 16 |
| 5180 | 0.10050 | 0.03300 | 3.05 | Q06830 | Peroxiredoxin-1 | 636 | 7.3/22.2 | 7 | 47 |
| 8849 | 0.06850 | 0.00100 | 68.50 | P54727 | UV excision repair protein RAD23 homolog B | 643 | 4.8/43.2 | 8 | 41 |
| 8872 | 0.05933 | 0.02533 | 2.34 | P06576 | ATP synthase subunit beta, mitochondrial | 513 | 5.3/56.5 | 8 | 34 |
| 8985 | 0.09233 | 0.01900 | 4.86 | P06733 | Enolase 1 | 638 | 5.7/42.3 | 8 | 28 |
| 9003 | 0.15800 | 0.03033 | 5.21 | AAA51580 | Gamma-actin | 620 | 4.6/43.3 | 3 | 19 |
| 9023 | 0.63483 | 0.28000 | 2.27 | Q3ZCM7 | Tubulin beta-8 chain | 344 | 4.8/49.7 | 4 | 18 |
| 9103 | 0.05133 | 0.01850 | 2.77 | P06396 | Gelsolin | 1241 | 5.9/85.6 | 4 | 25 |
| 9126 | 0.06717 | 0.01100 | 6.11 | O95336 | 6-phosphogluconolactonase | 331 | 5.7/27.8 | 4 | 39 |
| 9141 | 0.10867 | 0.03400 | 3.20 | 1HJO_A | Chain A, Heat-Shock 70 kd Protein 42 kd Atpase N-Terminal Domain | 1329 | 7.4/28.6 | 5 | 45 |
| 9152 | 0.08583 | 0.00217 | 39.62 | P09668 | Procathepsin H | 517 | 8.4/37.4 | 3 | 29 |
| 9153 | 0.13433 | 0.01400 | 9.60 | P52566 | Rho GDP-dissociation inhibitor 2 | 616 | 5.1/23.0 | 10 | 75 |
| 9169 | 0.09733 | 0.04633 | 2.10 | AAA35607 | IgE-binding protein | 257 | 7.4/26.1 | 2 | 22 |
| 9337 | 0.10317 | 0.04183 | 2.47 | 1GLO_A | Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S | 193 | 6.6/16.5 | 5 | 32 |
| 9408 | 0.29833 | 0.12683 | 2.35 | 1AWI_A | Chain A, Human Platelet Profilin complexed with The L-Pro10 Peptide | 988 | 9.1/14.5 | 2 | 93 |
| 9504 | 2.49950 | 1.10067 | 2.27 | P08670 | Vimentin | 2541 | 5.1/53.6 | 12 | 63 |
| 9734 | 0.11817 | 0.00100 | 118.17 | P10809 | 60 kDa heat shock protein, mitochondrial | 2283 | 5.7/61.0 | 13 | 56 |
Only identified proteins are shown. Accession number: international database of the name and ID number of protein. Fold change: average density of the specific protein in males compared to females. Mowse score: measures reliability of the protein identification; greater than 100 ensures higher reliability that the protein identified is correct. Observed pI/Mr: isoelectric point and molecular weight of the protein. Ms/Ms: number of peptides sequenced after digestion. Total sequence coverage: percentage of the peptide sequenced.
Proteins that had at least a 2-fold higher expression in alveolar macrophages from women.
| Spot | Mean of normalized | Mean of normalized | Fold changes | Accession number | Protein ID | Mowse | Observed pI/Mr | Number of peptides | Total seq. |
|---|---|---|---|---|---|---|---|---|---|
| 778 | 0.0317 | 0.1257 | 3.97 | P19971 | Thymidine phosphorylase | 326 | 5.2/55.0 | 8 | 31 |
| 947 | 0.4037 | 0.9677 | 2.40 | O14773 | Tripeptidyl-peptidase I | 427 | 5.7/47.6 | 3 | 19 |
| 1526 | 0.0402 | 0.0855 | 2.13 | P07355 | Annexin A2 | 422 | 7.6/38.6 | 6 | 36 |
| 2342 | 0.0182 | 0.0443 | 2.44 | Q16781 | Ubiquitin-conjugating enzyme E2 N | 134 | 5.7/15.7 | 2 | 22 |
| 2536 | 0.0575 | 0.1312 | 2.28 | P01884 | Beta-2-microglobulin | 107 | 6.0/12.0 | 2 | 34 |
| 4917 | 0.2527 | 1.0122 | 4.01 | CAA23759 | Unnamed protein product | 1004 | 7.0/13.6 | 2 | 95 |
| 4947 | 0.0657 | 0.1440 | 2.19 | NP_004842 | Napsin A preproprotein | 1678 | 5.3/35.0 | 3 | 22 |
| 8844 | 0.0028 | 0.0513 | 18.12 | Q02818 | Nucleobindin-1 | 282 | 5.2/53.8 | 11 | 29 |
| 9158 | 0.0893 | 0.1852 | 2.07 | 1JHW_A | Chain A, Ca2+-binding mimicry in the crystal structure of the Eu3+-bound mutant human macrophage capping protein cap G | 1063 | 4.9/26.3 | 5 | 34 |
| 9207 | 0.0112 | 0.0510 | 4.57 | P07203 | Glutathione peroxidase | 320 | 5.5/24.2 | 4 | 54 |
| 9501 | 0.0447 | 0.0922 | 2.06 | P43686-2 | Proteasome 26S ATPase subunit 4 isoform 2 | 192 | 5.0/62.7 | 3 | 18 |
| 9629 | 0.0725 | 0.2178 | 3.00 | P07237 | Protein disulfide-isomerase | 937 | 4.8/57.1 | 8 | 34 |
| 9658 | 0.0245 | 0.1052 | 4.29 | P26038 | Moesin | 539 | 6.1/67.9 | 6 | 13 |
Only identified proteins are shown. Accession number: international database of the name and ID number of protein. Fold change: average density of the specific protein in males compared to females. Mowse score: measures reliability of the protein identification; greater than 100 ensures higher reliability that the protein identified is correct. Observed pI/Mr: isoelectric point and molecular weight of the protein. Ms/Ms: number of peptides sequenced after digestion. Total sequence coverage: percentage of the peptide sequenced.