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Literature DB >> 24725176

Exploring free-energy landscapes of intrinsically disordered proteins at atomic resolution using NMR spectroscopy.

Malene Ringkjøbing Jensen¹, Markus Zweckstetter, Jie-rong Huang, Martin Blackledge.

Abstract

Entities: Disease

Mesh：

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Year: 2014 PMID： 24725176 DOI： 10.1021/cr400688u

Source DB: PubMed Journal: Chem Rev ISSN： 0009-2665 Impact factor: 60.622

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82 in total

1. Improved validation of IDP ensembles by one-bond Cα-Hα scalar couplings.

Authors: Vytautas Gapsys; Raghavendran L Narayanan; ShengQi Xiang; Bert L de Groot; Markus Zweckstetter
Journal: J Biomol NMR Date: 2015-10-03 Impact factor: 2.835

Review 2. Force field development and simulations of intrinsically disordered proteins.

Authors: Jing Huang; Alexander D MacKerell
Journal: Curr Opin Struct Biol Date: 2017-11-05 Impact factor: 6.809

3. Extensive tests and evaluation of the CHARMM36IDPSFF force field for intrinsically disordered proteins and folded proteins.

Authors: Hao Liu; Dong Song; Yangpeng Zhang; Sheng Yang; Ray Luo; Hai-Feng Chen
Journal: Phys Chem Chem Phys Date: 2019-10-09 Impact factor: 3.676

4. Concomitant disorder and high-affinity zinc binding in the human zinc- and iron-regulated transport protein 4 intracellular loop.

Authors: Elizabeth M Bafaro; Mark W Maciejewski; Jeffrey C Hoch; Robert E Dempski
Journal: Protein Sci Date: 2019-03-12 Impact factor: 6.725

10. Conformation and Dynamics of the Troponin I C-Terminal Domain: Combining Single-Molecule and Computational Approaches for a Disordered Protein Region.

Authors: Lauren Ann Metskas; Elizabeth Rhoades
Journal: J Am Chem Soc Date: 2015-09-10 Impact factor: 15.419

Exploring free-energy landscapes of intrinsically disordered proteins at atomic resolution using NMR spectroscopy.

1. Improved validation of IDP ensembles by one-bond Cα-Hα scalar couplings.

Review 2. Force field development and simulations of intrinsically disordered proteins.

3. Extensive tests and evaluation of the CHARMM36IDPSFF force field for intrinsically disordered proteins and folded proteins.

4. Concomitant disorder and high-affinity zinc binding in the human zinc- and iron-regulated transport protein 4 intracellular loop.

Review 5. Conditionally disordered proteins: bringing the environment back into the fold.

6. Conformational analysis of short polar side-chain amino-acids through umbrella sampling and DFT calculations.

7. Dihedral angle preferences of amino acid residues forming various non-local interactions in proteins.

8. Dissecting the Energetics of Intrinsically Disordered Proteins via a Hybrid Experimental and Computational Approach.

9. Folding propensity of intrinsically disordered proteins by osmotic stress.

10. Conformation and Dynamics of the Troponin I C-Terminal Domain: Combining Single-Molecule and Computational Approaches for a Disordered Protein Region.