Literature DB >> 24724941

Public databases of plant natural products for computational drug discovery.

Chun-Wei Tung1.   

Abstract

Plant natural products have been intensively investigated during the past decades with a considerable amount of generated data. Databases are subsequently developed to facilitate the management and analysis of accumulated information including plant species, chemical compounds, structures and bioactivities. With the support of databases, the screening of novel bioactivities for plant natural products can benefit from advanced computational methods to accelerate the progress of drug discovery. This overview describes the contents of publicly available databases useful for computational research of plant natural products. Based on the databases, quantitative structure-activity relationship models and protein-ligand docking methods can be developed and applied to analyze and screen bioactive compounds. More public and structured databases with unique contents, search functions and links to major databases are needed for efficiently exploring the chemical space of plant natural products.

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Year:  2014        PMID: 24724941     DOI: 10.2174/1573409910666140414145934

Source DB:  PubMed          Journal:  Curr Comput Aided Drug Des        ISSN: 1573-4099            Impact factor:   1.606


  3 in total

1.  TIPdb-3D: the three-dimensional structure database of phytochemicals from Taiwan indigenous plants.

Authors:  Chun-Wei Tung; Ying-Chi Lin; Hsun-Shuo Chang; Chia-Chi Wang; Ih-Sheng Chen; Jhao-Liang Jheng; Jih-Heng Li
Journal:  Database (Oxford)       Date:  2014-06-13       Impact factor: 3.451

2.  Structure⁻Activity Relationship and Molecular Docking of Natural Product Library Reveal Chrysin as a Novel Dipeptidyl Peptidase-4 (DPP-4) Inhibitor: An Integrated In Silico and In Vitro Study.

Authors:  Poonam Kalhotra; Veera C S R Chittepu; Guillermo Osorio-Revilla; Tzayhri Gallardo-Velázquez
Journal:  Molecules       Date:  2018-06-06       Impact factor: 4.411

3.  BIOFACQUIM: A Mexican Compound Database of Natural Products.

Authors:  B Angélica Pilón-Jiménez; Fernanda I Saldívar-González; Bárbara I Díaz-Eufracio; José L Medina-Franco
Journal:  Biomolecules       Date:  2019-01-17
  3 in total

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