Literature DB >> 24714366

Center of Origin and Centers of Diversity in an Ancient Crop, Brassica rapa (Turnip Rape).

Yiming Guo1, Sheng Chen1, Zaiyun Li1, Wallace A Cowling2.   

Abstract

Brassica rapa is the most widely distributed and has the longest history of domestication of the agricultural Brassica species. Molecular genetic diversity, based on 51 simple sequence repeat primer pairs and 715 alleles at polymorphic loci, was used to predict the center of origin and centers of diversity in a global collection of 173 B. rapa accessions. The accessions were separated into 3 molecular genetic groups based on STRUCTURE analysis-group 1 from the classical Old World (Europe and west Asia-north Africa), group 2 from east Asia, and group 3 from east, central, south, and southeast Asia. Accessions classified as "wild" (B. rapa var. sylvestris) were found only in group 1 and this group had the highest number and richness of private alleles. Each group included a diverse range of agricultural morphotypes (oilseed, root, or leafy vegetable types), flowering habit (winter, semi-winter, or spring type), self-compatibility or incompatibility, and seed color. The Old World and east, south, and central Asia were distinct subpopulations based on analysis of shared unique alleles. This study supports the theory that the classical Old World is the center of origin of B. rapa, with centers of diversity in east Asia and along ancient trade routes in Asia, with recent migration to the New World. © The American Genetic Association 2014. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

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Keywords:  zzm321990Brassica campestriszzm321990; zzm321990microsatellite markerszzm321990; zzm321990molecular genetic diversityzzm321990; zzm321990phenotypic diversityzzm321990; zzm321990simple sequence repeatzzm321990

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Year:  2014        PMID: 24714366     DOI: 10.1093/jhered/esu021

Source DB:  PubMed          Journal:  J Hered        ISSN: 0022-1503            Impact factor:   2.645


  11 in total

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Authors:  S Yang; S Chen; X X Geng; G Yan; Z Y Li; J L Meng; W A Cowling; W J Zhou
Journal:  Theor Appl Genet       Date:  2016-01-18       Impact factor: 5.699

2.  Extraction of the Constituent Subgenomes of the Natural Allopolyploid Rapeseed (Brassica napus L.).

Authors:  Bin Zhu; Yuqin Tu; Pan Zeng; Xianhong Ge; Zaiyun Li
Journal:  Genetics       Date:  2016-09-16       Impact factor: 4.562

3.  Brassica and Sinapis Seeds in Medieval Archaeological Sites: An Example of Multiproxy Analysis for Their Identification and Ethnobotanical Interpretation.

Authors:  Giovanna Bosi; Simona De Felice; Michael J Wilkinson; Joël Allainguillaume; Laura Arru; Juri Nascimbene; Fabrizio Buldrini
Journal:  Plants (Basel)       Date:  2022-08-12

4.  Genetic Vulnerability and the Relationship of Commercial Germplasms of Maize in Brazil with the Nested Association Mapping Parents.

Authors:  Luciano Rogério Braatz de Andrade; Roberto Fritsche Neto; Ítalo Stefanine Correia Granato; Gustavo César Sant'Ana; Pedro Patric Pinho Morais; Aluízio Borém
Journal:  PLoS One       Date:  2016-10-25       Impact factor: 3.240

5.  Application of RAD Sequencing for Evaluating the Genetic Diversity of Domesticated Panax notoginseng (Araliaceae).

Authors:  Yuezhi Pan; Xueqin Wang; Guiling Sun; Fusheng Li; Xun Gong
Journal:  PLoS One       Date:  2016-11-15       Impact factor: 3.240

6.  Drought-Tolerant Brassica rapa Shows Rapid Expression of Gene Networks for General Stress Responses and Programmed Cell Death Under Simulated Drought Stress.

Authors:  Yi Ming Guo; Birgit Samans; Sheng Chen; Kidist B Kibret; Sarah Hatzig; Neil C Turner; Matthew N Nelson; Wallace A Cowling; Rod J Snowdon
Journal:  Plant Mol Biol Report       Date:  2017-05-22       Impact factor: 1.595

7.  Genome-Wide Gene Expressions Respond Differently to A-subgenome Origins in Brassica napus Synthetic Hybrids and Natural Allotetraploid.

Authors:  Dawei Zhang; Qi Pan; Chen Tan; Bin Zhu; Xianhong Ge; Yujiao Shao; Zaiyun Li
Journal:  Front Plant Sci       Date:  2016-10-13       Impact factor: 5.753

8.  Population Structure and Phylogenetic Relationships in a Diverse Panel of Brassica rapa L.

Authors:  Kevin A Bird; Hong An; Elodie Gazave; Michael A Gore; J Chris Pires; Larry D Robertson; Joanne A Labate
Journal:  Front Plant Sci       Date:  2017-03-13       Impact factor: 5.753

9.  Genome Size Variation and Comparative Genomics Reveal Intraspecific Diversity in Brassica rapa.

Authors:  Julien Boutte; Loeiz Maillet; Thomas Chaussepied; Sébastien Letort; Jean-Marc Aury; Caroline Belser; Franz Boideau; Anael Brunet; Olivier Coriton; Gwenaëlle Deniot; Cyril Falentin; Virginie Huteau; Maryse Lodé-Taburel; Jérôme Morice; Gwenn Trotoux; Anne-Marie Chèvre; Mathieu Rousseau-Gueutin; Julie Ferreira de Carvalho
Journal:  Front Plant Sci       Date:  2020-11-12       Impact factor: 5.753

10.  Brassica rapa Domestication: Untangling Wild and Feral Forms and Convergence of Crop Morphotypes.

Authors:  Alex C McAlvay; Aaron P Ragsdale; Makenzie E Mabry; Xinshuai Qi; Kevin A Bird; Pablo Velasco; Hong An; J Chris Pires; Eve Emshwiller
Journal:  Mol Biol Evol       Date:  2021-07-29       Impact factor: 16.240

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