| Literature DB >> 24714095 |
Tebogo M Segolodi1, Faith L Henderson1, Charles E Rose2, Kyle T Turner3, Clement Zeh4, Peter N Fonjungo5, Richard Niska2, Clyde Hart2, Lynn A Paxton2.
Abstract
INTRODUCTION: Accurate clinical laboratory reference values derived from a local or regional population base are required to correctly interpret laboratory results. In Botswana, most reference intervals used to date are not standardized across clinical laboratories and are based on values derived from populations in the United States or Western Europe.Entities:
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Year: 2014 PMID: 24714095 PMCID: PMC3979652 DOI: 10.1371/journal.pone.0093034
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1The TDF2 Botswana PrEp lab reference values Consort diagram.
The comparison of calculated population biochemical reference values for participants screened (N = 1786; Females = 770 and Males = 1016) for the TDF2 Botswana study with DAIDS and BOTUSA site established ranges.
| Analyte | Units | Comparison (out of range) | Division of AIDS Toxicity Grading (DAIDS) | ||||
| BOTUSA Reference Interval | TDF2 | Grade 1 | Grade 2 | Grade 3 | Grade 4 | ||
| N (%) | N (%) | N (%) | N (%) | N (%) | |||
|
| IU/L | 10–36 | 71 (3.98) | 29 (1.62) | 5 (0.28) | 1 (0.06) | 0 (0.00) |
|
| IU/L | 11–41 | 401 (22.45) | 33 (1.85) | 2 (0.11) | 0 (0.00) | 0 (0.00) |
|
| mg/dL | 0.7–1.4 | 572 (32.03) | 0 (0.00) | 0 (0.00) | 0 (0.00) | 0 (0.00) |
|
| mg/dL | 7.0–30.0 | 232 (12.99) | 1 (0.06) | 0 (0.00) | 0 (0.00) | 0 (0.00) |
|
| mg/dL | 0.1–1.3 | 110 (6.16) | 82 (4.59) | 26 (1.46) | 2 (0.11) | 0 (0.00) |
|
| mg/dL | 0.1–0.4 | 69 (3.86) | 25 (1.40) | 16 (0.90) | 0 (0.00) | 0 (0.00) |
|
| IU/L | 60–97 | 908 (50.84) | 492 (27.55) | 182 (10.19) | 44 (2.46) | 1(0.06) |
|
| mg/dL | 2.5–4.5 | 150 (8.40) | 39 (2.18) | 106 (5.94) | 26 (1.46) | 0 (0.00) |
|
| mEq/L | 95–108 | 14 (0.78) | 14 (0.78) | 0 (0.00) | 0 (0.00) | 0 (0.00) |
|
| mEq/L | 21–29 | 146 (8.17) | 94 (5.26) | 0 (0.00) | 1 (0.06) | 0 (0.00) |
|
| mEq/L | 3.5–5.1 | 70 (3.92) | 26 (1.46) | 1 (0.06) | 0 (0.00) | 0 (0.00) |
|
| mEq/L | 135–145 | 24 (1.34) | 22 (1.23) | 1 (0.06) | 1 (0.06) | 0 (0.00) |
|
| g/dl | 13–17 | 110 (6.16) | 35 (1.96) | 15 (0.84) | 16 (0.90) | 2 (0.11) |
|
| g/dl | 12–15 | 193 (10.81) | ||||
|
| % | 40–50 | 125 (7.00) | - | - | - | - |
|
| % | 36–45 | 147 (8.23) | ||||
The calculated population biochemical reference values for participants screened (N = 1786; Females = 770 and Males = 1016) for the TDF2 Botswana study.
| Analyte | Sex | Mean | 95% CI for mean | Median | Range | 2.5th–97.5th percentile | p-value |
|
| Combined | 21.55 | (21.09, 22.04) | 20.0 | 10.0–204.0 | 13.0–42.0 | <0.001 |
|
| Female | 18.57 | (18.13, 19.14) | 17.0 | 10.0–134.0 | 12.0–31.0 | |
|
| Male | 23.80 | (23.12, 24.61) | 22.0 | 11.0–204.0 | 14.0–48.0 | |
|
| Combined | 17.48 | (16.96, 18.02) | 15.0 | 0.0–152.0 | 7.0–46.0 | <0.001 |
|
| Female | 14.25 | (13.64, 14.87) | 12.0 | 0.0–148.0 | 7.0–33.0 | |
|
| Male | 19.94 | (19.20, 20.68) | 17.0 | 3.0–152.0 | 8.0–53.0 | |
|
| Combined | 0.74 | (0.73, 0.74) | 0.7 | 0.3–1.4 | 0.5–1.1 | <0.001 |
|
| Female | 0.62 | (0.61, 0.62) | 0.6 | 0.3–1.1 | 0.5–0.8 | |
| Male | 0.83 | (0.82, 0.83) | 0.8 | 0.5–1.4 | 0.6–1.1 | ||
|
| Combined | 10.19 | (10.00, 10.38) | 9.0 | 3.0–75.0 | 5.0–21.0 | <0.001 |
|
| Female | 9.72 | (9.43, 10.00) | 9.0 | 3.0–37.0 | 5.0–21.0 | |
| Male | 10.54 | (10.28, 10.82) | 10.0 | 4.0–75.0 | 5.0–22.0 | ||
|
| Combined | 0.66 | (0.64, 0.68) | 0.5 | 0.1–3.6 | 0.2–1.8 | <0.001 |
|
| Female | 0.51 | (0.48, 0.53) | 0.4 | 0.1–3.0 | 0.2–1.3 | |
| Male | 0.78 | (0.75, 0.81) | 0.7 | 0.2–3.6 | 0.3–2.1 | ||
|
| Combined | 0.18 | (0.17, 0.18) | 0.2 | 0.0–0.8 | 0.1–0.4 | <0.001 |
|
| Female | 0.14 | (0.14, 0.15) | 0.1 | 0.0–0.8 | 0.0–0.3 | |
| Male | 0.21 | (0.20, 0.21) | 0.2 | 0.0–0.8 | 0.1–0.5 | ||
|
| Combined | 96.11 | (94.59, 97.82) | 91.0 | 27.0–473.0 | 47.0–176.0 | <0.001 |
|
| Female | 90.99 | (88.91, 93.38) | 87.0 | 32.0–417.0 | 46.0–162.0 | |
| Male | 99.99 | (97.61, 102.35) | 94.0 | 27.0–473.0 | 49.0–181.0 | ||
|
| Combined | 3.27 | (3.24, 3.29) | 3.3 | 1.3–5.2 | 2.2–4.3 | <0.001 |
|
| Female | 3.37 | (3.34, 3.41) | 3.4 | 1.8–5.0 | 2.3–4.4 | |
| Male | 3.18 | (3.15, 3.22) | 3.2 | 1.3–5.2 | 2.0–4.3 | ||
|
| Combined | 102.61 | (102.50, 102.72) | 103.0 | 95.0–112.0 | 98.0–107.0 | <0.001 |
|
| Female | 103.63 | (103.49, 103.79) | 103.0 | 95.0–112.0 | 100.0–108.0 | |
| Male | 101.84 | (101.70, 101.97) | 102.0 | 96.0–112.0 | 98.0–106.0 | ||
|
| Combined | 24.71 | (24.60, 24.82) | 24.7 | 10.0–32.8 | 19.9–29.1 | <0.001 |
|
| Female | 23.57 | (23.43, 23.71) | 23.5 | 16.9–30.4 | 19.2–27.7 | |
| Male | 25.58 | (25.45, 25.71) | 25.6 | 10.0–32.8 | 21.3–29.5 | ||
|
| Combined | 4.32 | (4.30, 4.34) | 4.3 | 2.9–5.8 | 3.6–5.2 | 0.006 |
|
| Female | 4.28 | (4.26, 4.31) | 4.3 | 2.9–5.8 | 3.6–5.1 | |
| Male | 4.34 | (4.32, 4.37) | 4.3 | 3.1–5.7 | 3.6–5.2 | ||
|
| Combined | 139.08 | (138.98, 139.18) | 139.0 | 127.0–156.0 | 135.0–143.0 | <0.001 |
|
| Female | 138.86 | (138.72, 139.01) | 139.0 | 132.0–146.0 | 135.0–143.0 | |
| Male | 139.24 | (139.11, 139.37) | 139.0 | 127.0–156.0 | 135.0–143.0 | ||
|
| Combined | 14.46 | (14.36, 14.54) | 14.7 | 6.4–24.9 | 10.4–17.6 | <0.001 |
|
| Female | 12.87 | (12.76, 12.97) | 13.0 | 6.4–16.6 | 9.1–15.3 | |
| Male | 15.66 | (15.59, 15.74) | 15.6 | 9.4–24.9 | 13.2–17.8 | ||
|
| Combined | 43.13 | (42.90, 43.33) | 43.5 | 23.8–68.0 | 32.9–51.7 | <0.001 |
|
| Female | 39.17 | (38.90, 39.41) | 39.4 | 23.8–50.2 | 30.6–45.6 | |
| Male | 46.12 | (45.93, 46.31) | 46.0 | 35.0–68.0 | 40.2–52.9 |
Note:
*P-value is for the Wilcoxon rank-sum test for Females versus Males.
Comparison of the calculated Botswana TDF2 screened cohort reference intervals with the reference intervals used in Botswana and other African countries.
| Analyte | Units | Botswana TDF2 Screened Cohort | Botswana Ministry of Health (MOH) | Botswana Ministry of Health (MOH) | Published Botswana Harvard Partnership Lab | US Massachusetts General Hospital | Combined Eastern and Southern African | Combined Study (Uganda, Kenya, Zambia) |
|
| IU/L | 13–42 | 10–34 | 11–41 | - | 0–35 | 14–60 | 14–60 |
|
| IU/L | 7–46 | 11–41 | 10–34 | - | 0–35 | 8–61 | 8–61 |
|
| mg/dL | 44.2–97.2 | 53–100 | 53–97 | - | 0–133 | 47–109 | 47–109 |
|
| mg/dL | 5.0–21.0 | 5.6–19.7 | 5.6–19.7 | - | 10–20 | - | - |
|
| mg/dL | 0.2–1.8 | 0.1–1.5 | 0.1–1.5 | - | 0.3–1.0 | 0.2–2.2 | - |
|
| mg/dL | 0.1–0.4 | 0–0.2. | 0–0.2 | - | 0.1–0.3 | 0–0.5 | - |
|
| IU/L | 47–176 | 0–108 | 28–100 | - | 60–180 | 35–159 | - |
|
| mg/dL | 2.2–4.3 | 1.91–2.35 | 0.80–1.55 | - | - | - | - |
|
| mEq/L | 98–107 | 95–108 | 95–108 | - | - | - | - |
|
| mEq/L | 19.9–29.1 | - | - | - | - | - | - |
|
| mEq/L | 3.6–5.2 | 3.5–5.1 | 3.5–5.1 | - | - | - | - |
|
| mEq/L | 135–143 | 135–145 | 135–145 | - | - | - | - |
|
| g/dl | |||||||
|
| 13.2–17.8 | 13.7–18.0 | 13.7–18.0 | 11.90–17.10 | 13.5–17.5 | 12.2–17.7 | 12.2–17.0 | |
|
| 9.1–15.3 | 12.0–16.0 | 12.0–16.0 | 9.3–16.00 | 12–16 | 9.5–15.8 | 9.5–15.8 | |
|
| % | |||||||
|
| 40.2–52.9 | 40–54 | 40–54 | 36.10–49.30 | 41–53 | 35.0–50.8 | 35.0–50.8 | |
|
| 30.6–45.6 | 36–48 | 36–48 | 28.2–46.2 | 36–46 | 29.4–45.4 | 29.4–45.4 |
*Botswana Ministry of health Patient management system Roche Integra derived values.
**Botswana Ministry of health reference values using the Beckman coulter AU680 analyzer.