Literature DB >> 24709791

An updated model for nitrate uptake modelling in plants. II. Assessment of active root involvement in nitrate uptake based on integrated root system age: measured versus modelled outputs.

Philippe Malagoli1, Erwan Le Deunff.   

Abstract

Background and Aims An updated version of a mechanistic structural-functional model was developed to predict nitrogen (N) uptake throughout the growth cycle by a crop of winter oilseed rape, Brassica napus, grown under field conditions. Methods The functional component of the model derives from a revisited conceptual framework that combines the thermodynamic Flow-Force interpretation of nitrate uptake isotherms and environmental and in planta effects on nitrate influx. Estimation of the root biomass (structural component) is based upon a combination of root mapping along the soil depth profile in the field and a relationship between the specific root length and external nitrate concentration. The root biomass contributing actively to N uptake was determined by introduction of an integrated root system age that allows assignment of a root absorption capacity at a specific age of the root. Key Results Simulations were well matched to measured data of N taken up under field conditions for three levels of N fertilization. The model outputs indicated that the two topsoil layers (0-30 and 30-60 cm) contained 75-88 % of the total root length and biomass, and accounted for 90-95 % of N taken up at harvest. Conclusions This conceptual framework provides a model of nitrate uptake that is able to respond to external nitrate fluctuations at both functional and structural levels.

Entities:  

Keywords:  Brassica napus; Flow–Force interpretation; N uptake modelling; N uptake regulation; Nitrate; functional–structural plant model; nitrogen uptake efficiency; root development; root longevity

Mesh:

Substances:

Year:  2014        PMID: 24709791      PMCID: PMC3997640          DOI: 10.1093/aob/mcu022

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  36 in total

1.  Dual pathways for regulation of root branching by nitrate.

Authors:  H Zhang; A Jennings; P W Barlow; B G Forde
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

Review 2.  Can less yield more? Is reducing nutrient input into the environment compatible with maintaining crop production?

Authors:  Allen G Good; Ashok K Shrawat; Douglas G Muench
Journal:  Trends Plant Sci       Date:  2004-12       Impact factor: 18.313

3.  A central role for the nitrate transporter NRT2.1 in the integrated morphological and physiological responses of the root system to nitrogen limitation in Arabidopsis.

Authors:  Tony Remans; Philippe Nacry; Marjorie Pervent; Thomas Girin; Pascal Tillard; Marc Lepetit; Alain Gojon
Journal:  Plant Physiol       Date:  2006-01-13       Impact factor: 8.340

4.  CHL1 functions as a nitrate sensor in plants.

Authors:  Cheng-Hsun Ho; Shan-Hua Lin; Heng-Cheng Hu; Yi-Fang Tsay
Journal:  Cell       Date:  2009-09-18       Impact factor: 41.582

5.  Non-equilibrium thermodynamics and electrokinetic interpretation of biological systems.

Authors:  M Thellier
Journal:  J Theor Biol       Date:  1971-06       Impact factor: 2.691

6.  Modeling nitrogen uptake in oilseed rape cv Capitol during a growth cycle using influx kinetics of root nitrate transport systems and field experimental data.

Authors:  Philippe Malagoli; Philippe Lainé; Erwan Le Deunff; Laurence Rossato; Bertrand Ney; Alain Ourry
Journal:  Plant Physiol       Date:  2003-12-11       Impact factor: 8.340

7.  AtCIPK8, a CBL-interacting protein kinase, regulates the low-affinity phase of the primary nitrate response.

Authors:  Heng-Cheng Hu; Ya-Yun Wang; Yi-Fang Tsay
Journal:  Plant J       Date:  2008-10-25       Impact factor: 6.417

Review 8.  Nitrate transport and signalling.

Authors:  Anthony J Miller; Xiaorong Fan; Mathilde Orsel; Susan J Smith; Darren M Wells
Journal:  J Exp Bot       Date:  2007-05-22       Impact factor: 6.992

9.  Oxidative pentose phosphate pathway-dependent sugar sensing as a mechanism for regulation of root ion transporters by photosynthesis.

Authors:  Laurence Lejay; Judith Wirth; Marjorie Pervent; Joanna Marie-France Cross; Pascal Tillard; Alain Gojon
Journal:  Plant Physiol       Date:  2008-02-27       Impact factor: 8.340

10.  Regulation of the nitrate transporter gene AtNRT2.1 in Arabidopsis thaliana: responses to nitrate, amino acids and developmental stage.

Authors:  Patricia Nazoa; J John Vidmar; Timothy J Tranbarger; Karine Mouline; Isabelle Damiani; Pascal Tillard; Degen Zhuo; Anthony D M Glass; Bruno Touraine
Journal:  Plant Mol Biol       Date:  2003-06       Impact factor: 4.076

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  4 in total

Review 1.  Breaking conceptual locks in modelling root absorption of nutrients: reopening the thermodynamic viewpoint of ion transport across the root.

Authors:  Erwan Le Deunff; Philippe Malagoli
Journal:  Ann Bot       Date:  2014-12       Impact factor: 4.357

2.  An updated model for nitrate uptake modelling in plants. I. Functional component: cross-combination of flow-force interpretation of nitrate uptake isotherms, and environmental and in planta regulation of nitrate influx.

Authors:  Erwan Le Deunff; Philippe Malagoli
Journal:  Ann Bot       Date:  2014-03-16       Impact factor: 4.357

3.  Combined Allosteric Responses Explain the Bifurcation in Non-Linear Dynamics of 15N Root Fluxes Under Nutritional Steady-State Conditions for Nitrate.

Authors:  Erwan Le Deunff; Patrick Beauclair; Julien Lecourt; Carole Deleu; Philippe Malagoli
Journal:  Front Plant Sci       Date:  2020-08-28       Impact factor: 5.753

Review 4.  The Thermodynamic Flow-Force Interpretation of Root Nutrient Uptake Kinetics: A Powerful Formalism for Agronomic and Phytoplanktonic Models.

Authors:  Erwan Le Deunff; Pierre-Henri Tournier; Philippe Malagoli
Journal:  Front Physiol       Date:  2016-06-27       Impact factor: 4.566

  4 in total

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