Literature DB >> 24705993

Trends in information theory-based chemical structure codification.

Stephen J Barigye1, Yovani Marrero-Ponce, Facundo Pérez-Giménez, Danail Bonchev.   

Abstract

This report offers a chronological review of the most relevant applications of information theory in the codification of chemical structure information, through the so-called information indices. Basically, these are derived from the analysis of the statistical patterns of molecular structure representations, which include primitive global chemical formulae, chemical graphs, or matrix representations. Finally, new approaches that attempt to go "back to the roots" of information theory, in order to integrate other information-theoretic measures in chemical structure coding are discussed.

Mesh:

Year:  2014        PMID: 24705993     DOI: 10.1007/s11030-014-9517-7

Source DB:  PubMed          Journal:  Mol Divers        ISSN: 1381-1991            Impact factor:   2.943


  24 in total

1.  From molecular connectivity indices to semiempirical connectivity terms: recent trends in graph theoretical descriptors.

Authors:  L Pogliani
Journal:  Chem Rev       Date:  2000-10-11       Impact factor: 60.622

2.  Structure/response correlations and similarity/diversity analysis by GETAWAY descriptors. 2. Application of the novel 3D molecular descriptors to QSAR/QSPR studies.

Authors:  Viviana Consonni; Roberto Todeschini; Manuela Pavan; Paola Gramatica
Journal:  J Chem Inf Comput Sci       Date:  2002 May-Jun

3.  Aromaticity of polycyclic conjugated hydrocarbons.

Authors:  Milan Randić
Journal:  Chem Rev       Date:  2003-09       Impact factor: 60.622

Review 4.  Graphical representation of proteins.

Authors:  Milan Randić; Jure Zupan; Alexandru T Balaban; Drazen Vikić-Topić; Dejan Plavsić
Journal:  Chem Rev       Date:  2010-10-12       Impact factor: 60.622

5.  Structural determination of paraffin boiling points.

Authors:  H WIENER
Journal:  J Am Chem Soc       Date:  1947-01       Impact factor: 15.419

6.  SHED: Shannon entropy descriptors from topological feature distributions.

Authors:  Elisabet Gregori-Puigjané; Jordi Mestres
Journal:  J Chem Inf Model       Date:  2006 Jul-Aug       Impact factor: 4.956

7.  Characterization of nucleotidic sequences using maximum entropy techniques.

Authors:  C Cosmi; V Cuomo; M Ragosta; M F Macchiato
Journal:  J Theor Biol       Date:  1990-12-07       Impact factor: 2.691

8.  Information theory in neuroscience.

Authors:  Alexander G Dimitrov; Aurel A Lazar; Jonathan D Victor
Journal:  J Comput Neurosci       Date:  2011-02       Impact factor: 1.621

9.  Event-based criteria in GT-STAF information indices: theory, exploratory diversity analysis and QSPR applications.

Authors:  S J Barigye; Y Marrero-Ponce; Y Martínez López; O Martínez Santiago; F Torrens; R García Domenech; J Galvez
Journal:  SAR QSAR Environ Res       Date:  2012-10-16       Impact factor: 3.000

10.  Molecular topology and narcosis. A quantitative structure-activity relationship (QSAR) study of alcohols using complementary information content (CIC).

Authors:  S C Basak; V R Magnuson
Journal:  Arzneimittelforschung       Date:  1983
View more
  6 in total

1.  IMMAN: free software for information theory-based chemometric analysis.

Authors:  Ricardo W Pino Urias; Stephen J Barigye; Yovani Marrero-Ponce; César R García-Jacas; José R Valdes-Martiní; Facundo Perez-Gimenez
Journal:  Mol Divers       Date:  2015-01-26       Impact factor: 2.943

2.  Undersampling: case studies of flaviviral inhibitory activities.

Authors:  Stephen J Barigye; José Manuel García de la Vega; Juan A Castillo-Garit
Journal:  J Comput Aided Mol Des       Date:  2019-11-26       Impact factor: 3.686

3.  Water Activity Prediction in Sugar and Polyol Systems Using Theoretical Molecular Descriptors.

Authors:  Antonio Zuorro
Journal:  Int J Mol Sci       Date:  2021-10-13       Impact factor: 5.923

4.  Choquet integral-based fuzzy molecular characterizations: when global definitions are computed from the dependency among atom/bond contributions (LOVIs/LOEIs).

Authors:  César R García-Jacas; Lisset Cabrera-Leyva; Yovani Marrero-Ponce; José Suárez-Lezcano; Fernando Cortés-Guzmán; Mario Pupo-Meriño; Ricardo Vivas-Reyes
Journal:  J Cheminform       Date:  2018-10-25       Impact factor: 5.514

5.  Tensor Algebra-based Geometrical (3D) Biomacro-Molecular Descriptors for Protein Research: Theory, Applications and Comparison with other Methods.

Authors:  Julio E Terán; Yovani Marrero-Ponce; Ernesto Contreras-Torres; César R García-Jacas; Ricardo Vivas-Reyes; Enrique Terán; F Javier Torres
Journal:  Sci Rep       Date:  2019-08-06       Impact factor: 4.379

6.  Alignment-Free Method to Predict Enzyme Classes and Subclasses.

Authors:  Riccardo Concu; M Natália D S Cordeiro
Journal:  Int J Mol Sci       Date:  2019-10-29       Impact factor: 5.923

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.