Literature DB >> 24702023

Next-generation sequencing applied to rare diseases genomics.

Krissi Danielsson1, Liew Jun Mun, Amanda Lordemann, Jimmy Mao, Cheng-Ho Jimmy Lin.   

Abstract

Genomics has revolutionized the study of rare diseases. In this review, we overview the latest technological development, rare disease discoveries, implementation obstacles and bioethical challenges. First, we discuss the technology of genome and exome sequencing, including the different next-generation platforms and exome enrichment technologies. Second, we survey the pioneering centers and discoveries for rare diseases, including few of the research institutions that have contributed to the field, as well as an overview survey of different types of rare diseases that have had new discoveries due to next-generation sequencing. Third, we discuss the obstacles and challenges that allow for clinical implementation, including returning of results, informed consent and privacy. Last, we discuss possible outlook as clinical genomics receives wider adoption, as third-generation sequencing is coming onto the horizon, and some needs in informatics and software to further advance the field.

Mesh:

Year:  2014        PMID: 24702023     DOI: 10.1586/14737159.2014.904749

Source DB:  PubMed          Journal:  Expert Rev Mol Diagn        ISSN: 1473-7159            Impact factor:   5.225


  9 in total

Review 1.  The long tail and rare disease research: the impact of next-generation sequencing for rare Mendelian disorders.

Authors:  Tony Shen; Ariel Lee; Carol Shen; C Jimmy Lin
Journal:  Genet Res (Camb)       Date:  2015-09-14       Impact factor: 1.588

Review 2.  NGS Technologies as a Turning Point in Rare Disease Research , Diagnosis and Treatment.

Authors:  Ana Fernandez-Marmiesse; Sofia Gouveia; Maria L Couce
Journal:  Curr Med Chem       Date:  2018-01-30       Impact factor: 4.530

3.  A novel pathogenic variant in OSBPL2 linked to hereditary late-onset deafness in a Mongolian family.

Authors:  Ningjin Wu; Husile Husile; Liqing Yang; Yaning Cao; Xing Li; Wenyan Huo; Haihua Bai; Yangjian Liu; Qizhu Wu
Journal:  BMC Med Genet       Date:  2019-03-20       Impact factor: 2.103

Review 4.  Opportunities and Challenges for Machine Learning in Rare Diseases.

Authors:  Sergio Decherchi; Elena Pedrini; Marina Mordenti; Andrea Cavalli; Luca Sangiorgi
Journal:  Front Med (Lausanne)       Date:  2021-10-05

Review 5.  Genetic Testing for Rare Diseases: A Systematic Review of Ethical Aspects.

Authors:  Judith Kruse; Regina Mueller; Ali A Aghdassi; Markus M Lerch; Sabine Salloch
Journal:  Front Genet       Date:  2022-01-26       Impact factor: 4.599

6.  Improving diagnosis and broadening the phenotypes in early-onset seizure and severe developmental delay disorders through gene panel analysis.

Authors:  Natalie Trump; Amy McTague; Helen Brittain; Apostolos Papandreou; Esther Meyer; Adeline Ngoh; Rodger Palmer; Deborah Morrogh; Christopher Boustred; Jane A Hurst; Lucy Jenkins; Manju A Kurian; Richard H Scott
Journal:  J Med Genet       Date:  2016-03-18       Impact factor: 6.318

Review 7.  The third generation sequencing: the advanced approach to genetic diseases.

Authors:  Tiantian Xiao; Wenhao Zhou
Journal:  Transl Pediatr       Date:  2020-04

8.  Abnormal expression of GABAA receptor subunits and hypomotility upon loss of gabra1 in zebrafish.

Authors:  Nayeli G Reyes-Nava; Hung-Chun Yu; Curtis R Coughlin; Tamim H Shaikh; Anita M Quintana
Journal:  Biol Open       Date:  2020-04-13       Impact factor: 2.422

Review 9.  From public health genomics to precision public health: a 20-year journey.

Authors:  Muin J Khoury; M Scott Bowen; Mindy Clyne; W David Dotson; Marta L Gwinn; Ridgely Fisk Green; Katherine Kolor; Juan L Rodriguez; Anja Wulf; Wei Yu
Journal:  Genet Med       Date:  2017-12-14       Impact factor: 8.822

  9 in total

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