Literature DB >> 24699747

Overexpression, crystallization and preliminary X-ray crystallographic analysis of the ectoine hydroxylase from Sphingopyxis alaskensis.

Astrid Hoeppner1, Nils Widderich2, Erhard Bremer2, Sander H J Smits3.   

Abstract

The ectoine hydroxylase (EctD) is a member of the non-haem-containing iron(II)- and 2-oxoglutarate-dependent dioxygenase superfamily. Its mononuclear iron centre is a prerequisite for the activity of this enzyme and promotes the O2-dependent oxidative decarboxylation of 2-oxoglutarate, which is coupled to a two-electron oxidation of the substrate ectoine to yield 5-hydroxyectoine. An expression and purification protocol for the EctD enzyme from Sphingopyxis alaskensis was developed and the protein was crystallized using the sitting-drop vapour-diffusion method. This resulted in two different crystal forms, representing the apo and iron-bound forms of the enzyme.

Entities:  

Keywords:  Sphingopyxis alaskensis; ectoine hydroxylase

Mesh:

Substances:

Year:  2014        PMID: 24699747      PMCID: PMC3976071          DOI: 10.1107/S2053230X14004798

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  17 in total

1.  STUDIES ON THE CHEMICAL NATURE OF CLOSTRIDIAL FERREDOXIN.

Authors:  W LOVENBERG; B B BUCHANAN; J C RABINOWITZ
Journal:  J Biol Chem       Date:  1963-12       Impact factor: 5.157

Review 2.  Ectoines in cell stress protection: uses and biotechnological production.

Authors:  José M Pastor; Manuel Salvador; Montserrat Argandoña; Vicente Bernal; Mercedes Reina-Bueno; Laszlo N Csonka; José L Iborra; Carmen Vargas; Joaquín J Nieto; Manuel Cánovas
Journal:  Biotechnol Adv       Date:  2010-07-01       Impact factor: 14.227

3.  Characterization of biosynthetic enzymes for ectoine as a compatible solute in a moderately halophilic eubacterium, Halomonas elongata.

Authors:  H Ono; K Sawada; N Khunajakr; T Tao; M Yamamoto; M Hiramoto; A Shinmyo; M Takano; Y Murooka
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Characterization of genes for the biosynthesis of the compatible solute ectoine from Marinococcus halophilus and osmoregulated expression in Escherichia coli.

Authors:  Petra Louis; Erwin A Galinski
Journal:  Microbiology (Reading)       Date:  1997-04       Impact factor: 2.777

Review 6.  Extremolytes: Natural compounds from extremophiles for versatile applications.

Authors:  Georg Lentzen; Thomas Schwarz
Journal:  Appl Microbiol Biotechnol       Date:  2006-09-07       Impact factor: 4.813

7.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

Review 8.  The multifunctional role of ectoine as a natural cell protectant.

Authors:  Ruediger Graf; Soheila Anzali; Joachim Buenger; Frank Pfluecker; Hansjuergen Driller
Journal:  Clin Dermatol       Date:  2008 Jul-Aug       Impact factor: 3.541

9.  Functional expression of the ectoine hydroxylase gene (thpD) from Streptomyces chrysomallus in Halomonas elongata.

Authors:  Julia Prabhu; Florian Schauwecker; Nicolas Grammel; Ullrich Keller; Michael Bernhard
Journal:  Appl Environ Microbiol       Date:  2004-05       Impact factor: 4.792

10.  Osmotically induced synthesis of the compatible solute hydroxyectoine is mediated by an evolutionarily conserved ectoine hydroxylase.

Authors:  Jan Bursy; Antonio J Pierik; Nathalie Pica; Erhard Bremer
Journal:  J Biol Chem       Date:  2007-07-18       Impact factor: 5.157

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  4 in total

1.  Crystal structure of the ectoine hydroxylase, a snapshot of the active site.

Authors:  Astrid Höppner; Nils Widderich; Michael Lenders; Erhard Bremer; Sander H J Smits
Journal:  J Biol Chem       Date:  2014-08-29       Impact factor: 5.157

2.  The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine.

Authors:  Alexandra A Richter; Stefanie Kobus; Laura Czech; Astrid Hoeppner; Jan Zarzycki; Tobias J Erb; Lukas Lauterbach; Jeroen S Dickschat; Erhard Bremer; Sander H J Smits
Journal:  J Biol Chem       Date:  2020-01-22       Impact factor: 5.157

3.  Overproduction, crystallization and X-ray diffraction data analysis of ectoine synthase from the cold-adapted marine bacterium Sphingopyxis alaskensis.

Authors:  Stefanie Kobus; Nils Widderich; Astrid Hoeppner; Erhard Bremer; Sander H J Smits
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-07-28       Impact factor: 1.056

4.  Illuminating the catalytic core of ectoine synthase through structural and biochemical analysis.

Authors:  Laura Czech; Astrid Höppner; Stefanie Kobus; Andreas Seubert; Ramona Riclea; Jeroen S Dickschat; Johann Heider; Sander H J Smits; Erhard Bremer
Journal:  Sci Rep       Date:  2019-01-23       Impact factor: 4.379

  4 in total

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