Literature DB >> 24699081

Cleaning up in the endoplasmic reticulum: ubiquitin in charge.

John C Christianson1, Yihong Ye2.   

Abstract

The eukaryotic endoplasmic reticulum (ER) maintains protein homeostasis by eliminating unwanted proteins through the evolutionarily conserved ER-associated degradation (ERAD) pathway. During ERAD, maturation-defective and surplus polypeptides are evicted from the ER lumen and/or lipid bilayer through the process of retrotranslocation and ultimately degraded by the proteasome. An integral facet of the ERAD mechanism is the ubiquitin system, composed of the ubiquitin modifier and the factors for assembling, processing and binding ubiquitin chains on conjugated substrates. Beyond simply marking polypeptides for degradation, the ubiquitin system is functionally intertwined with retrotranslocation machinery to transport polypeptides across the ER membrane.

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Year:  2014        PMID: 24699081      PMCID: PMC9397582          DOI: 10.1038/nsmb.2793

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   18.361


  131 in total

1.  The AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosol.

Authors:  Y Ye; H H Meyer; T A Rapoport
Journal:  Nature       Date:  2001-12-06       Impact factor: 49.962

2.  Structure of the AAA ATPase p97.

Authors:  X Zhang; A Shaw; P A Bates; R H Newman; B Gowen; E Orlova; M A Gorman; H Kondo; P Dokurno; J Lally; G Leonard; H Meyer; M van Heel; P S Freemont
Journal:  Mol Cell       Date:  2000-12       Impact factor: 17.970

3.  Multiple interactions of rad23 suggest a mechanism for ubiquitylated substrate delivery important in proteolysis.

Authors:  Ikjin Kim; Kaixia Mi; Hai Rao
Journal:  Mol Biol Cell       Date:  2004-04-30       Impact factor: 4.138

4.  Distinct ubiquitin-ligase complexes define convergent pathways for the degradation of ER proteins.

Authors:  Pedro Carvalho; Veit Goder; Tom A Rapoport
Journal:  Cell       Date:  2006-07-28       Impact factor: 41.582

5.  Decoupling the role of ubiquitination for the dislocation versus degradation of major histocompatibility complex (MHC) class I proteins during endoplasmic reticulum-associated degradation (ERAD).

Authors:  Xiaoli Wang; Y Y Lawrence Yu; Nancy Myers; Ted H Hansen
Journal:  J Biol Chem       Date:  2013-06-25       Impact factor: 5.157

6.  Role of HERP and a HERP-related protein in HRD1-dependent protein degradation at the endoplasmic reticulum.

Authors:  Chih-Hsiang Huang; Yue-Ru Chu; Yihong Ye; Xin Chen
Journal:  J Biol Chem       Date:  2013-12-23       Impact factor: 5.157

7.  Deglycosylation-dependent fluorescent proteins provide unique tools for the study of ER-associated degradation.

Authors:  Jeff E Grotzke; Qiao Lu; Peter Cresswell
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-11       Impact factor: 11.205

8.  A lipid-based model for the creation of an escape hatch from the endoplasmic reticulum.

Authors:  Hidde L Ploegh
Journal:  Nature       Date:  2007-07-26       Impact factor: 49.962

9.  Quality control of integral membrane proteins by assembly-dependent membrane integration.

Authors:  Matthias J Feige; Linda M Hendershot
Journal:  Mol Cell       Date:  2013-08-08       Impact factor: 17.970

10.  Real-time fluorescence detection of ERAD substrate retrotranslocation in a mammalian in vitro system.

Authors:  Judit Wahlman; George N DeMartino; William R Skach; Neil J Bulleid; Jeffrey L Brodsky; Arthur E Johnson
Journal:  Cell       Date:  2007-06-01       Impact factor: 41.582

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  170 in total

1.  Chemical Modulation of Endocytic Sorting Augments Adeno-associated Viral Transduction.

Authors:  Garrett E Berry; Aravind Asokan
Journal:  J Biol Chem       Date:  2015-11-02       Impact factor: 5.157

2.  Endoplasmic reticulum-associated degradation of the renal potassium channel, ROMK, leads to type II Bartter syndrome.

Authors:  Brighid M O'Donnell; Timothy D Mackie; Arohan R Subramanya; Jeffrey L Brodsky
Journal:  J Biol Chem       Date:  2017-06-19       Impact factor: 5.157

3.  Arsenic Compromises Both p97 and Proteasome Functions.

Authors:  Joseph Tillotson; Christopher J Zerio; Bryan Harder; Andrew J Ambrose; Kevin S Jung; MinJin Kang; Donna D Zhang; Eli Chapman
Journal:  Chem Res Toxicol       Date:  2017-07-07       Impact factor: 3.739

4.  The intramembrane protease SPP impacts morphology of the endoplasmic reticulum by triggering degradation of morphogenic proteins.

Authors:  Dönem Avci; Nicole S Malchus; Ronny Heidasch; Holger Lorenz; Karsten Richter; Michelle Neßling; Marius K Lemberg
Journal:  J Biol Chem       Date:  2018-12-21       Impact factor: 5.157

5.  Trafficking of the human ether-a-go-go-related gene (hERG) potassium channel is regulated by the ubiquitin ligase rififylin (RFFL).

Authors:  Karim Roder; Anatoli Kabakov; Karni S Moshal; Kevin R Murphy; An Xie; Samuel Dudley; Nilüfer N Turan; Yichun Lu; Calum A MacRae; Gideon Koren
Journal:  J Biol Chem       Date:  2018-11-06       Impact factor: 5.157

6.  Unique double-ring structure of the peroxisomal Pex1/Pex6 ATPase complex revealed by cryo-electron microscopy.

Authors:  Neil B Blok; Dongyan Tan; Ray Yu-Ruei Wang; Pawel A Penczek; David Baker; Frank DiMaio; Tom A Rapoport; Thomas Walz
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-13       Impact factor: 11.205

7.  Targeting HPV-16 antigens to the endoplasmic reticulum induces an endoplasmic reticulum stress response.

Authors:  David H Martínez-Puente; José J Pérez-Trujillo; Yolanda Gutiérrez-Puente; Humberto Rodríguez-Rocha; Aracely García-García; Odila Saucedo-Cárdenas; Roberto Montes-de-Oca-Luna; María J Loera-Arias
Journal:  Cell Stress Chaperones       Date:  2019-01-02       Impact factor: 3.667

Review 8.  Targeting the ubiquitin pathway for cancer treatment.

Authors:  Jia Liu; Shavali Shaik; Xiangpeng Dai; Qiong Wu; Xiuxia Zhou; Zhiwei Wang; Wenyi Wei
Journal:  Biochim Biophys Acta       Date:  2014-12-04

9.  The Capture of a Disabled Proteasome Identifies Erg25 as a Substrate for Endoplasmic Reticulum Associated Degradation.

Authors:  Teresa M Buck; Xuemei Zeng; Pamela S Cantrell; Richard T Cattley; Zikri Hasanbasri; Megan E Yates; Diep Nguyen; Nathan A Yates; Jeffrey L Brodsky
Journal:  Mol Cell Proteomics       Date:  2020-08-31       Impact factor: 5.911

Review 10.  Proteome complexity and the forces that drive proteome imbalance.

Authors:  J Wade Harper; Eric J Bennett
Journal:  Nature       Date:  2016-09-15       Impact factor: 49.962

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