Literature DB >> 24694151

A fully automatic extraction of magnetic resonance image features in glioblastoma patients.

Jing Zhang1, Daniel P Barboriak1, Hasan Hobbs1, Maciej A Mazurowski1.   

Abstract

PURPOSE: Glioblastoma is the most common malignant brain tumor. It is characterized by low median survival time and high survival variability. Survival prognosis for glioblastoma is very important for optimized treatment planning. Imaging features observed in magnetic resonance (MR) images were shown to be a good predictor of survival. However, manual assessment of MR features is time-consuming and can be associated with a high inter-reader variability as well as inaccuracies in the assessment. In response to this limitation, the authors proposed and evaluated a computer algorithm that extracts important MR image features in a fully automatic manner.
METHODS: The algorithm first automatically segmented the available volumes into a background region and four tumor regions. Then, it extracted ten features from the segmented MR imaging volumes, some of which were previously indicated as predictive of clinical outcomes. To evaluate the algorithm, the authors compared the extracted features for 73 glioblastoma patients to the reference standard established by manual segmentation of the tumors.
RESULTS: The experiments showed that their algorithm was able to extract most of the image features with moderate to high accuracy. High correlation coefficients between the automatically extracted value and reference standard were observed for the tumor location, minor and major axis length as well as tumor volume. Moderately high correlation coefficients were also observed for proportion of enhancing tumor, proportion of necrosis, and thickness of enhancing margin. The correlation coefficients for all these features were statistically significant (p < 0.0001).
CONCLUSIONS: The authors proposed and evaluated an algorithm that, given a set of MR volumes of a glioblastoma patient, is able to extract MR image features that correlate well with their reference standard. Future studies will evaluate how well the computer-extracted features predict survival.
© 2014 American Association of Physicists in Medicine.

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Mesh:

Year:  2014        PMID: 24694151     DOI: 10.1118/1.4866218

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  6 in total

1.  Computer-extracted MR imaging features are associated with survival in glioblastoma patients.

Authors:  Maciej A Mazurowski; Jing Zhang; Katherine B Peters; Hasan Hobbs
Journal:  J Neurooncol       Date:  2014-08-24       Impact factor: 4.130

2.  Automated Segmentation of Tissues Using CT and MRI: A Systematic Review.

Authors:  Leon Lenchik; Laura Heacock; Ashley A Weaver; Robert D Boutin; Tessa S Cook; Jason Itri; Christopher G Filippi; Rao P Gullapalli; James Lee; Marianna Zagurovskaya; Tara Retson; Kendra Godwin; Joey Nicholson; Ponnada A Narayana
Journal:  Acad Radiol       Date:  2019-08-10       Impact factor: 3.173

3.  Combining radiomics and deep convolutional neural network features from preoperative MRI for predicting clinically relevant genetic biomarkers in glioblastoma.

Authors:  Evan Calabrese; Jeffrey D Rudie; Andreas M Rauschecker; Javier E Villanueva-Meyer; Jennifer L Clarke; David A Solomon; Soonmee Cha
Journal:  Neurooncol Adv       Date:  2022-04-22

Review 4.  Automatic brain lesion segmentation on standard magnetic resonance images: a scoping review.

Authors:  Emilia Gryska; Justin Schneiderman; Isabella Björkman-Burtscher; Rolf A Heckemann
Journal:  BMJ Open       Date:  2021-01-29       Impact factor: 2.692

5.  Fully automatic GBM segmentation in the TCGA-GBM dataset: Prognosis and correlation with VASARI features.

Authors:  Emmanuel Rios Velazquez; Raphael Meier; William D Dunn; Brian Alexander; Roland Wiest; Stefan Bauer; David A Gutman; Mauricio Reyes; Hugo J W L Aerts
Journal:  Sci Rep       Date:  2015-11-18       Impact factor: 4.379

6.  A fully automated artificial intelligence method for non-invasive, imaging-based identification of genetic alterations in glioblastomas.

Authors:  Evan Calabrese; Javier E Villanueva-Meyer; Soonmee Cha
Journal:  Sci Rep       Date:  2020-07-16       Impact factor: 4.379

  6 in total

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