Literature DB >> 24692562

Intramolecular interactions that induce helical rearrangement upon rhodopsin activation: light-induced structural changes in metarhodopsin IIa probed by cysteine S-H stretching vibrations.

Yoichi Yamazaki1, Tomoko Nagata2, Akihisa Terakita3, Hideki Kandori4, Yoshinori Shichida2, Yasushi Imamoto5.   

Abstract

Rhodopsin undergoes rearrangements of its transmembrane helices after photon absorption to transfer a light signal to the G-protein transducin. To investigate the mechanism by which rhodopsin adopts the transducin-activating conformation, the local environmental changes in the transmembrane region were probed using the cysteine S-H group, whose stretching frequency is well isolated from the other protein vibrational modes. The S-H stretching modes of cysteine residues introduced into Helix III, which contains several key residues for the helical movements, and of native cysteine residues were measured by Fourier transform infrared spectroscopy. This method was applied to metarhodopsin IIa, a precursor of the transducin-activating state in which the intramolecular interactions are likely to produce a state ready for helical movements. No environmental change was observed near the ionic lock between Arg-135 in Helix III and Glu-247 in Helix VI that maintains the inactive conformation. Rather, the cysteine residues that showed environmental changes were located around the chromophore, Ala-164, His-211, and Phe-261. These findings imply that the hydrogen bond between Helix III and Helix V involving Glu-122 and His-211 and the hydrophobic packing between Helix III and Helix VI involving Gly-121, Leu-125, Phe-261, and Trp-265 are altered before the helical rearrangement leading toward the active conformation.
© 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Fourier Transform IR (FTIR); G-protein-coupled Receptor (GPCR); Phototransduction; Protein Conformation; Rhodopsin; Vision

Mesh:

Substances:

Year:  2014        PMID: 24692562      PMCID: PMC4022853          DOI: 10.1074/jbc.M113.527606

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  45 in total

1.  Crystal structure of rhodopsin: A G protein-coupled receptor.

Authors:  K Palczewski; T Kumasaka; T Hori; C A Behnke; H Motoshima; B A Fox; I Le Trong; D C Teller; T Okada; R E Stenkamp; M Yamamoto; M Miyano
Journal:  Science       Date:  2000-08-04       Impact factor: 47.728

Review 2.  Activation of rhodopsin: new insights from structural and biochemical studies.

Authors:  T Okada; O P Ernst; K Palczewski; K P Hofmann
Journal:  Trends Biochem Sci       Date:  2001-05       Impact factor: 13.807

Review 3.  Fourier transform IR spectroscopy study for new insights into molecular properties and activation mechanisms of visual pigment rhodopsin.

Authors:  Reiner Vogel; Friedrich Siebert
Journal:  Biopolymers       Date:  2003       Impact factor: 2.505

4.  TAUTOMERIC FORMS OF METARHODOPSIN.

Authors:  R G MATTHEWS; R HUBBARD; P K BROWN; G WALD
Journal:  J Gen Physiol       Date:  1963-11       Impact factor: 4.086

5.  Molecular properties of rhodopsin and rod function.

Authors:  Hiroo Imai; Vladimir Kefalov; Keisuke Sakurai; Osamu Chisaka; Yoshiki Ueda; Akishi Onishi; Takefumi Morizumi; Yingbin Fu; Kazuhisa Ichikawa; Kei Nakatani; Yoshihito Honda; Jeannie Chen; King-Wai Yau; Yoshinori Shichida
Journal:  J Biol Chem       Date:  2006-12-28       Impact factor: 5.157

6.  Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.

Authors:  David Salom; David T Lodowski; Ronald E Stenkamp; Isolde Le Trong; Marcin Golczak; Beata Jastrzebska; Tim Harris; Juan A Ballesteros; Krzysztof Palczewski
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-23       Impact factor: 11.205

7.  High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor.

Authors:  Vadim Cherezov; Daniel M Rosenbaum; Michael A Hanson; Søren G F Rasmussen; Foon Sun Thian; Tong Sun Kobilka; Hee-Jung Choi; Peter Kuhn; William I Weis; Brian K Kobilka; Raymond C Stevens
Journal:  Science       Date:  2007-10-25       Impact factor: 47.728

8.  Light-induced conformational changes of rhodopsin probed by fluorescent alexa594 immobilized on the cytoplasmic surface.

Authors:  Y Imamoto; M Kataoka; F Tokunaga; K Palczewski
Journal:  Biochemistry       Date:  2000-12-12       Impact factor: 3.162

9.  Crystal structure of the human beta2 adrenergic G-protein-coupled receptor.

Authors:  Søren G F Rasmussen; Hee-Jung Choi; Daniel M Rosenbaum; Tong Sun Kobilka; Foon Sun Thian; Patricia C Edwards; Manfred Burghammer; Venkata R P Ratnala; Ruslan Sanishvili; Robert F Fischetti; Gebhard F X Schertler; William I Weis; Brian K Kobilka
Journal:  Nature       Date:  2007-10-21       Impact factor: 49.962

10.  Histidine residues regulate the transition of photoexcited rhodopsin to its active conformation, metarhodopsin II.

Authors:  C J Weitz; J Nathans
Journal:  Neuron       Date:  1992-03       Impact factor: 17.173

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