Literature DB >> 24691103

Genome-wide transcriptome modulation in rice transgenic lines expressing engineered mitogen activated protein kinase kinase 6.

Kundan Kumar1, Alok Krishna Sinha1.   

Abstract

Mitogen activated protein kinase kinase (MAPKK) is the central module of MAPK cascade and also point of signal integration and divergence. To investigate the regulatory role of OsMKK6, the regulon of genes controlled by OsMKK6 was constructed by microarray analysis between constitutively activated overexpressing transgenic lines and the wild type rice. Regulated genes were identified in overexpressed constitutively activated OsMKK6 and they were further subdivided on the basis of functional categories, viz. transcription, metabolism, signaling, defense and unknown function. These findings suggest the possible physiological role of OsMKK6 in modulating gene expression and signaling pathways during different stresses.

Entities:  

Keywords:  MAPKK; MAPKK6; Microarray; Mitogen activated protein kinase kinase; Oryza sativa; Rice

Mesh:

Substances:

Year:  2014        PMID: 24691103      PMCID: PMC4091601          DOI: 10.4161/psb.28502

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  22 in total

Review 1.  Mammalian MAP kinase signalling cascades.

Authors:  L Chang; M Karin
Journal:  Nature       Date:  2001-03-01       Impact factor: 49.962

Review 2.  Complexity, cross talk and integration of plant MAP kinase signalling.

Authors:  Claudia Jonak; László Okrész; László Bögre; Heribert Hirt
Journal:  Curr Opin Plant Biol       Date:  2002-10       Impact factor: 7.834

Review 3.  Ancient signals: comparative genomics of plant MAPK and MAPKK gene families.

Authors:  Louis-Philippe Hamel; Marie-Claude Nicole; Somrudee Sritubtim; Marie-Josée Morency; Margaret Ellis; Juergen Ehlting; Nathalie Beaudoin; Brad Barbazuk; Dan Klessig; Justin Lee; Greg Martin; John Mundy; Yuko Ohashi; Dierk Scheel; Jen Sheen; Tim Xing; Shuqun Zhang; Armand Seguin; Brian E Ellis
Journal:  Trends Plant Sci       Date:  2006-03-14       Impact factor: 18.313

4.  Rice WNK1 is regulated by abiotic stress and involved in internal circadian rhythm.

Authors:  Kundan Kumar; Kudupudi Prabhakara Rao; Dipul Kumar Biswas; Alok Krishna Sinha
Journal:  Plant Signal Behav       Date:  2011-03-01

5.  A draft sequence of the rice genome (Oryza sativa L. ssp. indica).

Authors:  Jun Yu; Songnian Hu; Jun Wang; Gane Ka-Shu Wong; Songgang Li; Bin Liu; Yajun Deng; Li Dai; Yan Zhou; Xiuqing Zhang; Mengliang Cao; Jing Liu; Jiandong Sun; Jiabin Tang; Yanjiong Chen; Xiaobing Huang; Wei Lin; Chen Ye; Wei Tong; Lijuan Cong; Jianing Geng; Yujun Han; Lin Li; Wei Li; Guangqiang Hu; Xiangang Huang; Wenjie Li; Jian Li; Zhanwei Liu; Long Li; Jianping Liu; Qiuhui Qi; Jinsong Liu; Li Li; Tao Li; Xuegang Wang; Hong Lu; Tingting Wu; Miao Zhu; Peixiang Ni; Hua Han; Wei Dong; Xiaoyu Ren; Xiaoli Feng; Peng Cui; Xianran Li; Hao Wang; Xin Xu; Wenxue Zhai; Zhao Xu; Jinsong Zhang; Sijie He; Jianguo Zhang; Jichen Xu; Kunlin Zhang; Xianwu Zheng; Jianhai Dong; Wanyong Zeng; Lin Tao; Jia Ye; Jun Tan; Xide Ren; Xuewei Chen; Jun He; Daofeng Liu; Wei Tian; Chaoguang Tian; Hongai Xia; Qiyu Bao; Gang Li; Hui Gao; Ting Cao; Juan Wang; Wenming Zhao; Ping Li; Wei Chen; Xudong Wang; Yong Zhang; Jianfei Hu; Jing Wang; Song Liu; Jian Yang; Guangyu Zhang; Yuqing Xiong; Zhijie Li; Long Mao; Chengshu Zhou; Zhen Zhu; Runsheng Chen; Bailin Hao; Weimou Zheng; Shouyi Chen; Wei Guo; Guojie Li; Siqi Liu; Ming Tao; Jian Wang; Lihuang Zhu; Longping Yuan; Huanming Yang
Journal:  Science       Date:  2002-04-05       Impact factor: 47.728

6.  A draft sequence of the rice genome (Oryza sativa L. ssp. japonica).

Authors:  Stephen A Goff; Darrell Ricke; Tien-Hung Lan; Gernot Presting; Ronglin Wang; Molly Dunn; Jane Glazebrook; Allen Sessions; Paul Oeller; Hemant Varma; David Hadley; Don Hutchison; Chris Martin; Fumiaki Katagiri; B Markus Lange; Todd Moughamer; Yu Xia; Paul Budworth; Jingping Zhong; Trini Miguel; Uta Paszkowski; Shiping Zhang; Michelle Colbert; Wei-lin Sun; Lili Chen; Bret Cooper; Sylvia Park; Todd Charles Wood; Long Mao; Peter Quail; Rod Wing; Ralph Dean; Yeisoo Yu; Andrey Zharkikh; Richard Shen; Sudhir Sahasrabudhe; Alun Thomas; Rob Cannings; Alexander Gutin; Dmitry Pruss; Julia Reid; Sean Tavtigian; Jeff Mitchell; Glenn Eldredge; Terri Scholl; Rose Mary Miller; Satish Bhatnagar; Nils Adey; Todd Rubano; Nadeem Tusneem; Rosann Robinson; Jane Feldhaus; Teresita Macalma; Arnold Oliphant; Steven Briggs
Journal:  Science       Date:  2002-04-05       Impact factor: 47.728

7.  Ectopic expression of a cold-inducible transcription factor, CBF1/DREB1b, in transgenic rice (Oryza sativa L.).

Authors:  Sang-Choon Lee; Kyung-Won Huh; Kyungsook An; Gynheung An; Seong-Ryong Kim
Journal:  Mol Cells       Date:  2004-08-31       Impact factor: 5.034

8.  The expression of the salt-responsive gene salT from rice is regulated by hormonal and developmental cues.

Authors:  A B Garcia; J de A Engler; B Claes; R Villarroel; M Van Montagu; T Gerats; A Caplan
Journal:  Planta       Date:  1998-12       Impact factor: 4.116

9.  Mitogen-activated protein kinase cascades in plants: a new nomenclature.

Authors: 
Journal:  Trends Plant Sci       Date:  2002-07       Impact factor: 18.313

10.  Involvement of mitogen activated protein kinase kinase 6 in UV induced transcripts accumulation of genes in phytoalexin biosynthesis in rice.

Authors:  Dhammaprakash Pandhari Wankhede; Kundan Kumar; Pallavi Singh; Alok Krishna Sinha
Journal:  Rice (N Y)       Date:  2013-12-02       Impact factor: 4.783

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  3 in total

1.  Genome-Wide Identification of Mitogen-Activated Protein Kinase Gene Family across Fungal Lineage Shows Presence of Novel and Diverse Activation Loop Motifs.

Authors:  Tapan Kumar Mohanta; Nibedita Mohanta; Pratap Parida; Sujogya Kumar Panda; Lakshmi Narayanan Ponpandian; Hanhong Bae
Journal:  PLoS One       Date:  2016-02-26       Impact factor: 3.240

2.  Identification of Novel and Conserved miRNAs from Extreme Halophyte, Oryza coarctata, a Wild Relative of Rice.

Authors:  Tapan Kumar Mondal; Showkat Ahmad Ganie; Ananda Bhusan Debnath
Journal:  PLoS One       Date:  2015-10-27       Impact factor: 3.240

3.  Rice Improvement Through Genome-Based Functional Analysis and Molecular Breeding in India.

Authors:  Pinky Agarwal; Swarup K Parida; Saurabh Raghuvanshi; Sanjay Kapoor; Paramjit Khurana; Jitendra P Khurana; Akhilesh K Tyagi
Journal:  Rice (N Y)       Date:  2016-01-07       Impact factor: 4.783

  3 in total

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