| Literature DB >> 24689848 |
Mamiko Sakata-Yanagimoto1, Terukazu Enami, Yasuhisa Yokoyama, Shigeru Chiba.
Abstract
Mature lymphoid neoplasms (MLN) are clinically and pathologically more complex than precursor lymphoid neoplasms. Until recently, molecular characterization of MLN was mainly based on cytogenetics/fluorescence in situ hybridization, allele copy number, and mRNA expression, approaches that yielded scanty gene mutation information. Use of massive parallel sequencing technologies has changed this outcome, and now many gene mutations have been discovered. Some of these are considerably frequent in, and substantially specific to, distinct MLN subtypes, and occur at single or several hotspots. They include the V600E BRAF mutation in hairy cell leukemia, the L265P MYD88 mutation in Waldenström macroglobulinemia, the G17V RHOA mutation in angioimmunoblastic T-cell lymphoma and peripheral T-cell lymphoma, not otherwise specified, and the Y640F//D661Y/V/H/I//N647I STAT3 mutations in T-cell large granular lymphocytic leukemia. Detecting these mutations is highly valuable in diagnosing MLN subtypes. Defining these mutations also sheds light on the molecular pathogenesis of MLN, furthering development of molecular targeting therapies. In this review, we focus on the disease-specific gene mutations in MLN discovered by recent massive sequencing technologies.Entities:
Keywords: Drug targeting; genetic testing; high-throughput nucleotide sequencing; lymphoma; molecular medicine
Mesh:
Substances:
Year: 2014 PMID: 24689848 PMCID: PMC4317900 DOI: 10.1111/cas.12408
Source DB: PubMed Journal: Cancer Sci ISSN: 1347-9032 Impact factor: 6.716
Disease–specific mutations in mature lymphoid neoplasms
| Disease categories | Gene | Hotspot amino acids | Hotspot regions | Mutation frequency | Specificity |
|---|---|---|---|---|---|
| Hairy cell leukemia | V600E | — | ˜100% | 2.8% of symptomatic MM | |
| WM | L265P | — | 79–100% | 10–87% of IgM-MGUS, 19% of non-GC DLBCL, 2.9% of CLL | |
| AITL and AL-PTCL | G17V | — | 53–68% in AITL, 62% in AL-PTCL | Not identified in other hematologic malignancies | |
| T-LGL | Y640F, D661Y/V/H/I, N647I | — | 28–40% | 7% of AA, 3% of MDS, 1.6% of T-cell neoplasms, 3–5% of DLBCL | |
| NK/T-cell lymphoma | A572V, A573V, V722I | — | 20–35% | 4–7% of T-ALL, 0–7% of ATLL, 10% of mycosis fungoides, 9.5–10.5% of AMKL | |
| Splenic MZL | — | PEST domain | 21–25% | 1.5–5% of nonsplenic MZL, 3.7–7.9% of DLBCL | |
| Burkitt lymphoma | — | HLH domain | 34–68% | 0–2% of DLBCL |
AA, aplastic anemia; AITL, angioimmunoblastic T-cell lymphoma; AL-PTCL, AITL-like peripheral T-cell lymphoma, not otherwise specified; AMKL, acute megakaryocytic leukemia; ATLL, adult T-cell lymphoma/leukemia; CLL, chronic lymphocytic leukemia; DLBCL, diffuse large B-cell lymphoma; HLH, helix–loop–helix; MDS, myelodysplastic syndrome; MGUS, monoclonal gammopathy of undetermined significance; MM, multiple myeloma; MZL, marginal zone B-cell lymphoma; NK, natural killer; non-GC, non-germinal center; PEST, proline, glutamic acid, serine, threonine-rich; T-ALL, acute lymphoblastic T-cell leukemia; T-LGL, T-cell large granular lymphocytic leukemia; WM, Waldenström macroglobulinemia.
The distribution of the identical mutations in other lymphoid malignancies.
Figure 3Disease-specific mutations in T-cell large granular lymphocytic leukemia and natural killer (NK)/T-cell lymphoma. Both JAK and signal transducer and activator of transcription (STAT) are mediators of diverse cytokine signaling. After binding of the cytokine to the receptor, JAK proteins are activated, followed by phosphorylation (P) of STATs. Activated STATs are dimerized and enter the nucleus to initiate target gene transcription. Both JAK3 mutation in NK/T-cell lymphoma and STAT3 mutation in T-cell large granular leukemia enhance the JAK/STAT signaling pathway.
Figure 1Disease-specific mutations in B-cell lymphoid neoplasms. V-raf murine sarcoma viral oncogene homolog B (BRAF) is a serine/threonine protein kinase that mediates the MAPK pathway. B-cell receptor signaling triggers activation of BRAF. Activated BRAF phosphorylates MEKs, which, in turn, leads to activation of ERKs. The V600E BRAF mutant in hairy cell leukemia possesses constitutive kinase activity, resulting in overactivation of downstream targets. Myeloid differentiation primary-response gene 88 (MYD88) is an adaptor protein that plays an essential role in signaling by the Toll-like receptors (TLRs) and interleukin-1 receptor (IL-1R). On cell stimulation, MYD88 is directly recruited to the Toll/IL-1R (TIR) domain in TLRs/IL-1R, binds to Bruton tyrosine kinase (BTK) and acts to recruit IL-1R-associated protein kinases. This leads to activation of the nuclear factor-κB (NF-κB) signaling. The L265P MYD88 mutant in Waldenström macroglobulinemia contributes to constitutive activation of the NF-κB signaling by preferential binding to BTK. Inhibitor of DNA binding (ID3) is a member of the Id helix–loop–helix proteins, which lack a DNA-binding region and function as dominant negative antagonists of basic helix–loop–helix transcription factors, including transcription factor 3 (TCF3). TCF3 plays a role in germinal center B-cell development and promotes cell growth by activating the B-cell receptor signaling pathway, phosphatidylinositol 3-kinase (PI3K) signaling pathway, and positive cell cycle regulator cyclin D3 (CCND3). Gain-of-function mutations in TCF3 and loss-of-function mutations in ID3, the negative regulator of TCF3, in Burkitt lymphoma enhance the TCF3 pathway. NOTCH2 is a single transmembrane receptor. Following NOTCH ligand binding, NOTCH receptor is cleaved in the transmembrane region, resulting in the release of the intracellular domain (ICD) from the plasma membrane. Then ICD is translocated to the nucleus, and activates the transcription of target genes. This signal is terminated by phosphorylation (P) of the proline, glutamate, serine, and threonine (PEST) domain of the ICD, followed by proteasomal degradation. NOTCH2 mutants in splenic marginal zone lymphoma lack the degradation signals in the PEST domain and act in a gain-of-function manner. AKT, v-akt murine thymoma viral oncogene homolog; BCL10, B-cell lymphoma 10; BLNK, B-cell linker; CARD11, caspase recruitment domain family, member 11; ECD, extracellular domain; IKK, IκB kinase; IRAK, I interleukin-1 receptor-associated kinase; MALT1, mucosa associated lymphoid tissue lymphoma translocation gene 1; MAML1, mastermind-like 1; MDM2, MDM2 oncogene, E3 ubiquitin protein ligase; mTOR, mammalian target of rapamycin; MZB, marginal zone B cell; PLCγ, phospholipase C, gamma; PTEN, phosphatase and tensin homolog; RAS, rat sarcoma viral oncogene homolog; RASGRP, RAS guanyl releasing protein; RBPJk, recombination signal binding protein for immunoglobulin kappa J region; SFK, Src family kinases; SHP1, Src homology region 2 domain-containing phosphatase-1; SYK, spleen tyrosine kinase; TAB, TAK1 binding protein; TAK, TGF beta-activated kinase; TIRAP, TIR adaptor protein; TRAF6, TNF receptor-associated factor 6; Ub, ubiquitin.
Figure 2Disease-specific mutations in angioimmunoblastic T-cell lymphoma and its related cancers. Ras homolog gene family, member A (RHOA) acts as a molecular switch, cycling between a GDP-bound inactive state and a GTP-bound active state. RHOA is activated by specific guanine-exchange factors (GEFs) and inactivated by GTPase-activating proteins (GAPs). The G17V RHOA mutant in angioimmunoblastic T-cell lymphoma impairs binding capacity for GTP/GDP and inhibits activation of WT RHOA by sequestering the upstream activator GEFs.