Literature DB >> 24688753

The evolution of clonality testing in the diagnosis and monitoring of hematological malignancies.

Anna Gazzola1, Claudia Mannu1, Maura Rossi1, Maria Antonella Laginestra1, Maria Rosaria Sapienza1, Fabio Fuligni1, Maryam Etebari1, Federica Melle1, Elena Sabattini1, Claudio Agostinelli1, Francesco Bacci1, Carlo Alberto Sagramoso Sacchetti1, Stefano Aldo Pileri1, Pier Paolo Piccaluga2.   

Abstract

Currently, distinguishing between benign and malignant lymphoid proliferations is based on a combination of clinical characteristics, cyto/histomorphology, immunophenotype and the identification of well-defined chromosomal aberrations. However, such diagnoses remain challenging in 10-15% of cases of lymphoproliferative disorders, and clonality assessments are often required to confirm diagnostic suspicions. In recent years, the development of new techniques for clonality detection has allowed researchers to better characterize, classify and monitor hematological neoplasms. In the past, clonality was primarily studied by performing Southern blotting analyses to characterize rearrangements in segments of the IG and TCR genes. Currently, the most commonly used method in the clinical molecular diagnostic laboratory is polymerase chain reaction (PCR), which is an extremely sensitive technique for detecting nucleic acids. This technique is rapid, accurate, specific, and sensitive, and it can be used to analyze small biopsies as well as formalin-fixed paraffin-embedded samples. These advantages make PCR-based approaches the current gold standard for IG/TCR clonality testing. Since the completion of the first human genome sequence, there has been a rapid development of technologies to facilitate high-throughput sequencing of DNA. These techniques have been applied to the deep characterization and classification of various diseases, patient stratification, and the monitoring of minimal residual disease. Furthermore, these novel approaches have the potential to significantly improve the sensitivity and cost of clonality assays and post-treatment monitoring of B- and T-cell malignancies. However, more studies will be required to demonstrate the utility, sensitivity, and benefits of these methods in order to warrant their adoption into clinical practice. In this review, recent developments in clonality testing are examined with an emphasis on highly sensitive systems for improving diagnostic workups and minimal residual disease assessments.

Entities:  

Keywords:  PCR; clonality; hematological neoplasms; high-throughput sequencing

Year:  2014        PMID: 24688753      PMCID: PMC3949299          DOI: 10.1177/2040620713519729

Source DB:  PubMed          Journal:  Ther Adv Hematol        ISSN: 2040-6207


  66 in total

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2.  TCRB gene rearrangements in childhood and adult precursor-B-ALL: frequency, applicability as MRD-PCR target, and stability between diagnosis and relapse.

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Journal:  Leukemia       Date:  2004-12       Impact factor: 11.528

3.  Validation of immunoglobulin gene rearrangement detection by PCR using commercially available BIOMED-2 primers.

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Journal:  Leukemia       Date:  2006-01       Impact factor: 11.528

4.  Improved reliability of lymphoma diagnostics via PCR-based clonality testing: report of the BIOMED-2 Concerted Action BHM4-CT98-3936.

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Journal:  Leukemia       Date:  2006-12-14       Impact factor: 11.528

5.  Powerful strategy for polymerase chain reaction-based clonality assessment in T-cell malignancies Report of the BIOMED-2 Concerted Action BHM4 CT98-3936.

Authors:  M Brüggemann; H White; P Gaulard; R Garcia-Sanz; P Gameiro; S Oeschger; B Jasani; M Ott; G Delsol; A Orfao; M Tiemann; H Herbst; A W Langerak; M Spaargaren; E Moreau; P J T A Groenen; C Sambade; L Foroni; G I Carter; M Hummel; C Bastard; F Davi; M-H Delfau-Larue; M Kneba; J J M van Dongen; K Beldjord; T J Molina
Journal:  Leukemia       Date:  2006-12-14       Impact factor: 11.528

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Journal:  Leukemia       Date:  2006-12-14       Impact factor: 11.528

Review 7.  Standardized MRD quantification in European ALL trials: proceedings of the Second International Symposium on MRD assessment in Kiel, Germany, 18-20 September 2008.

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Journal:  Leukemia       Date:  2009-12-24       Impact factor: 11.528

8.  Application of BIOMED-2 clonality assays to formalin-fixed paraffin embedded follicular lymphoma specimens: superior performance of the IGK assays compared to IGH for suboptimal specimens.

Authors:  Anna Margrét Halldórsdóttir; Barbara A Zehnbauer; W Richard Burack
Journal:  Leuk Lymphoma       Date:  2007-07

9.  Incidence and clinicobiologic characteristics of leukemic B-cell chronic lymphoproliferative disorders with more than one B-cell clone.

Authors:  Maria-Luz Sanchez; Julia Almeida; David Gonzalez; Marcos Gonzalez; Maria-Antonia Garcia-Marcos; Ana Balanzategui; Maria-Consuelo Lopez-Berges; Josep Nomdedeu; Teresa Vallespi; Marcos Barbon; Alejandro Martin; Pilar de la Fuente; Guillermo Martin-Nuñez; Javier Fernandez-Calvo; Jesus-Maria Hernandez; Jesus F San Miguel; Alberto Orfao
Journal:  Blood       Date:  2003-06-26       Impact factor: 22.113

10.  Absence of clonal beta and gamma T-cell receptor gene rearrangements in a subset of peripheral T-cell lymphomas.

Authors:  L M Weiss; L J Picker; T M Grogan; R A Warnke; J Sklar
Journal:  Am J Pathol       Date:  1988-03       Impact factor: 4.307

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  16 in total

Review 1.  Informatics for cancer immunotherapy.

Authors:  J Hammerbacher; A Snyder
Journal:  Ann Oncol       Date:  2017-12-01       Impact factor: 32.976

2.  Next-Generation Sequencing-Based Clonality Detection of Immunoglobulin Gene Rearrangements in B-Cell Lymphoma.

Authors:  Diede A G van Bladel; Jessica L M van der Last-Kempkes; Blanca Scheijen; Patricia J T A Groenen
Journal:  Methods Mol Biol       Date:  2022

3.  Development and application of a next-generation sequencing protocol and bioinformatics pipeline for the comprehensive analysis of the canine immunoglobulin repertoire.

Authors:  Jonah N Cullen; Jolyon Martin; Albert J Vilella; Amy Treeful; David Sargan; Allan Bradley; Steven G Friedenberg
Journal:  PLoS One       Date:  2022-07-08       Impact factor: 3.752

4.  Evaluation of the clinicopathologic features of diffuse large B cell lymphoma after CD19-targeted CAR T-cell therapy emphasizing the potential diagnostic pitfalls.

Authors:  Jun Zhou; Wenjing Zhang; Yanping Zhang; Saifang Zheng; Luting Zhou; Xiaoqun Yang; Chaofu Wang
Journal:  Am J Transl Res       Date:  2020-10-15       Impact factor: 4.060

5.  Transformation of CLL to ALCL: the role of clonality studies in diagnostic molecular haematopathology.

Authors:  Richard Colling; Daniel Royston; Elizabeth Soilleux
Journal:  J Hematop       Date:  2016-08-08       Impact factor: 0.196

Review 6.  Genetic background and evolution of relapses in aggressive B-cell lymphomas.

Authors:  Darius Juskevicius; Stephan Dirnhofer; Alexandar Tzankov
Journal:  Haematologica       Date:  2017-05-29       Impact factor: 9.941

7.  Characterization of clonal immunoglobulin heavy (IGH) V-D-J gene rearrangements and the complementarity-determining region in South Indian patients with precursor B-cell acute lymphoblastic leukemia.

Authors:  Natarajan Sudhakar; Thangarajan Rajkumar; Kamalalayam Raghavan Rajalekshmy; Nirmala Karunakaran Nancy
Journal:  Blood Res       Date:  2017-03-27

8.  Rapid detection of immunoglobulin heavy chain gene rearrangement by PCR and melting curve analysis using combined FR2 and FR3 primers.

Authors:  Danfei Xu; Zhuo Yang; Donghong Zhang; Wei Wu; Ye Guo; Qian Chen; Dongsheng Xu; Wei Cui
Journal:  Diagn Pathol       Date:  2015-08-09       Impact factor: 2.644

9.  Breast implant-associated anaplastic large cell lymphoma in a Li-FRAUMENI patient: a case report.

Authors:  Ricardo Garcia Pastorello; Felipe D'Almeida Costa; Cynthia A B T Osório; Fabiana B A Makdissi; Stephania Martins Bezerra; Marina de Brot; Antonio Hugo J F M Campos; Fernando Augusto Soares; José Vassallo
Journal:  Diagn Pathol       Date:  2018-01-25       Impact factor: 2.644

Review 10.  T cell clonality assessment: past, present and future.

Authors:  Etienne Mahe; Tevor Pugh; Suzanne Kamel-Reid
Journal:  J Clin Pathol       Date:  2017-10-21       Impact factor: 3.411

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