Literature DB >> 24679436

The establishment of B versus T cell identity.

Kazuko Miyazaki1, Masaki Miyazaki1, Cornelis Murre2.   

Abstract

In B cell progenitors, E-proteins E2A and HEB (HeLa E-box binding protein) are crucial for the induction of a B lineage-specific program of gene expression and for orchestrating the assembly of the immunoglobulin loci. In the thymus E2A and HEB act differently, activating the expression of genes closely associated with the establishment of T cell identity and promoting the rearrangement of T cell receptor (TCR) loci. These findings have raised the question as to how E-proteins exert these different activities. We review here the distinct regulatory networks that establish B versus T cell identity, and how genomic architecture and location of genes is modulated in these lineage decisions. We conclude by proposing a model wherein stochasticity in the nuclear location of the early B cell factor 1 (Ebf1) locus in multipotent progenitors determines this lineage choice.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24679436      PMCID: PMC4030559          DOI: 10.1016/j.it.2014.02.009

Source DB:  PubMed          Journal:  Trends Immunol        ISSN: 1471-4906            Impact factor:   16.687


  64 in total

1.  Discrete enhancer elements mediate selective responsiveness of enhancer of split complex genes to common transcriptional activators.

Authors:  D T Nellesen; E C Lai; J W Posakony
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Review 2.  Genome-nuclear lamina interactions and gene regulation.

Authors:  Jop Kind; Bas van Steensel
Journal:  Curr Opin Cell Biol       Date:  2010-05-03       Impact factor: 8.382

3.  Ly6d marks the earliest stage of B-cell specification and identifies the branchpoint between B-cell and T-cell development.

Authors:  Matthew A Inlay; Deepta Bhattacharya; Debashis Sahoo; Thomas Serwold; Jun Seita; Holger Karsunky; Sylvia K Plevritis; David L Dill; Irving L Weissman
Journal:  Genes Dev       Date:  2009-10-15       Impact factor: 11.361

4.  Poised lineage specification in multipotential hematopoietic stem and progenitor cells by the polycomb protein Bmi1.

Authors:  Hideyuki Oguro; Jin Yuan; Hitoshi Ichikawa; Tomokatsu Ikawa; Satoshi Yamazaki; Hiroshi Kawamoto; Hiromitsu Nakauchi; Atsushi Iwama
Journal:  Cell Stem Cell       Date:  2010-03-05       Impact factor: 24.633

5.  A direct approach to the structure of eukaryotic chromosomes.

Authors:  J Sedat; L Manuelidis
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1978

6.  E protein transcription factors are required for the development of CD4(+) lineage T cells.

Authors:  Mary Elizabeth Jones-Mason; Xudong Zhao; Dietmar Kappes; Anna Lasorella; Antonio Iavarone; Yuan Zhuang
Journal:  Immunity       Date:  2012-03-15       Impact factor: 31.745

7.  A random-walk/giant-loop model for interphase chromosomes.

Authors:  R K Sachs; G van den Engh; B Trask; H Yokota; J E Hearst
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-28       Impact factor: 11.205

8.  An essential role for the transcription factor HEB in thymocyte survival, Tcra rearrangement and the development of natural killer T cells.

Authors:  Louise M D'Cruz; Jamie Knell; Jessica K Fujimoto; Ananda W Goldrath
Journal:  Nat Immunol       Date:  2010-02-14       Impact factor: 25.606

9.  Failure of B-cell differentiation in mice lacking the transcription factor EBF.

Authors:  H Lin; R Grosschedl
Journal:  Nature       Date:  1995-07-20       Impact factor: 49.962

10.  Id3 restricts the developmental potential of gamma delta lineage during thymopoiesis.

Authors:  Ikuko Ueda-Hayakawa; Josh Mahlios; Yuan Zhuang
Journal:  J Immunol       Date:  2009-05-01       Impact factor: 5.422

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  25 in total

Review 1.  Forging T-Lymphocyte Identity: Intersecting Networks of Transcriptional Control.

Authors:  Ellen V Rothenberg; Jonas Ungerbäck; Ameya Champhekar
Journal:  Adv Immunol       Date:  2015-10-26       Impact factor: 3.543

Review 2.  Cellular and chromatin dynamics of antibody-secreting plasma cells.

Authors:  Alexandra Bortnick; Cornelis Murre
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2015-10-21       Impact factor: 5.814

Review 3.  Transcriptional and epigenetic networks of helper T and innate lymphoid cells.

Authors:  Han-Yu Shih; Giuseppe Sciumè; Amanda C Poholek; Golnaz Vahedi; Kiyoshi Hirahara; Alejandro V Villarino; Michael Bonelli; Remy Bosselut; Yuka Kanno; Stefan A Muljo; John J O'Shea
Journal:  Immunol Rev       Date:  2014-09       Impact factor: 12.988

Review 4.  Orchestration of invariant natural killer T cell development by E and Id proteins.

Authors:  Sumedha Roy; Yuan Zhuang
Journal:  Crit Rev Immunol       Date:  2015       Impact factor: 2.214

5.  Non-coding Transcription Instructs Chromatin Folding and Compartmentalization to Dictate Enhancer-Promoter Communication and T Cell Fate.

Authors:  Takeshi Isoda; Amanda J Moore; Zhaoren He; Vivek Chandra; Masatoshi Aida; Matthew Denholtz; Jan Piet van Hamburg; Kathleen M Fisch; Aaron N Chang; Shawn P Fahl; David L Wiest; Cornelis Murre
Journal:  Cell       Date:  2017-09-21       Impact factor: 41.582

6.  The E-Id Protein Axis Specifies Adaptive Lymphoid Cell Identity and Suppresses Thymic Innate Lymphoid Cell Development.

Authors:  Masaki Miyazaki; Kazuko Miyazaki; Kenian Chen; Yi Jin; Jacob Turner; Amanda J Moore; Rintaro Saito; Kenichi Yoshida; Seishi Ogawa; Hans-Reimer Rodewald; Yin C Lin; Hiroshi Kawamoto; Cornelis Murre
Journal:  Immunity       Date:  2017-05-16       Impact factor: 31.745

7.  New roles for DNA cytosine modification, eRNA, anchors, and superanchors in developing B cell progenitors.

Authors:  Christopher Benner; Takeshi Isoda; Cornelis Murre
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-28       Impact factor: 11.205

8.  Unsupervised Trajectory Analysis of Single-Cell RNA-Seq and Imaging Data Reveals Alternative Tuft Cell Origins in the Gut.

Authors:  Charles A Herring; Amrita Banerjee; Eliot T McKinley; Alan J Simmons; Jie Ping; Joseph T Roland; Jeffrey L Franklin; Qi Liu; Michael J Gerdes; Robert J Coffey; Ken S Lau
Journal:  Cell Syst       Date:  2017-11-15       Impact factor: 10.304

Review 9.  Short-Circuiting Gene Regulatory Networks: Origins of B Cell Lymphoma.

Authors:  Olivia I Koues; Eugene M Oltz; Jacqueline E Payton
Journal:  Trends Genet       Date:  2015-10-22       Impact factor: 11.639

10.  G-quadruplex DNA structures can interfere with uracil glycosylase activity in vitro.

Authors:  Nate W Holton; Erik D Larson
Journal:  Mutagenesis       Date:  2015-12-14       Impact factor: 3.000

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