Literature DB >> 24679264

Gene clustering in plant specialized metabolism.

Hans-Wilhelm Nützmann1, Anne Osbourn2.   

Abstract

Physically linked clusters of genes that encode the enzymatic information for the synthesis of specialized metabolites are a well-established feature of microbial secondary metabolism. In contrast, the biosynthesis of plant specialized metabolites has until recently been thought to be almost exclusively encoded by genes that are randomly scattered in the genome. However, recent reports highlight the growing number of examples of gene clusters for specialized metabolic pathways in plants. Numerous gene clusters that encode for the biosynthesis of different classes of metabolite have now been discovered in a variety of plant species. Comparison of these characterized clusters now enables us to begin to define their salient features and to exploit plant biosynthetic gene clusters for synthetic biology applications.
Copyright © 2013 The Authors. Published by Elsevier Ltd.. All rights reserved.

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Year:  2013        PMID: 24679264     DOI: 10.1016/j.copbio.2013.10.009

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  73 in total

1.  The many faces of plant chromatin: Meeting summary of the 4th European workshop on plant chromatin 2015, Uppsala, Sweden.

Authors:  Iva Mozgová; Claudia Köhler; Valérie Gaudin; Lars Hennig
Journal:  Epigenetics       Date:  2015       Impact factor: 4.528

Review 2.  Bioinformatics tools for the identification of gene clusters that biosynthesize specialized metabolites.

Authors:  Arvind K Chavali; Seung Y Rhee
Journal:  Brief Bioinform       Date:  2018-09-28       Impact factor: 11.622

Review 3.  Synthetic Botany.

Authors:  Christian R Boehm; Bernardo Pollak; Nuri Purswani; Nicola Patron; Jim Haseloff
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-07-05       Impact factor: 10.005

4.  Genome-Wide Prediction of Metabolic Enzymes, Pathways, and Gene Clusters in Plants.

Authors:  Pascal Schläpfer; Peifen Zhang; Chuan Wang; Taehyong Kim; Michael Banf; Lee Chae; Kate Dreher; Arvind K Chavali; Ricardo Nilo-Poyanco; Thomas Bernard; Daniel Kahn; Seung Y Rhee
Journal:  Plant Physiol       Date:  2017-02-22       Impact factor: 8.340

5.  The RIN-MC Fusion of MADS-Box Transcription Factors Has Transcriptional Activity and Modulates Expression of Many Ripening Genes.

Authors:  Shan Li; Huijinlan Xu; Zheng Ju; Dongyan Cao; Hongliang Zhu; Daqi Fu; Donald Grierson; Guozheng Qin; Yunbo Luo; Benzhong Zhu
Journal:  Plant Physiol       Date:  2017-11-13       Impact factor: 8.340

Review 6.  Renaissance in phytomedicines: promising implications of NGS technologies.

Authors:  Sonal Sharma; Neeta Shrivastava
Journal:  Planta       Date:  2016-03-22       Impact factor: 4.116

Review 7.  Specialized Plant Metabolism Characteristics and Impact on Target Molecule Biotechnological Production.

Authors:  Hélio Nitta Matsuura; Sonia Malik; Fernanda de Costa; Morteza Yousefzadi; Mohammad Hossein Mirjalili; Randolph Arroo; Avninder S Bhambra; Miroslav Strnad; Mercedes Bonfill; Arthur Germano Fett-Neto
Journal:  Mol Biotechnol       Date:  2018-02       Impact factor: 2.695

8.  Stereochemical inversion of (S)-reticuline by a cytochrome P450 fusion in opium poppy.

Authors:  Scott C Farrow; Jillian M Hagel; Guillaume A W Beaudoin; Darcy C Burns; Peter J Facchini
Journal:  Nat Chem Biol       Date:  2015-07-01       Impact factor: 15.040

9.  The biosynthetic pathway of the nonsugar, high-intensity sweetener mogroside V from Siraitia grosvenorii.

Authors:  Maxim Itkin; Rachel Davidovich-Rikanati; Shahar Cohen; Vitaly Portnoy; Adi Doron-Faigenboim; Elad Oren; Shiri Freilich; Galil Tzuri; Nadine Baranes; Shmuel Shen; Marina Petreikov; Rotem Sertchook; Shifra Ben-Dor; Hugo Gottlieb; Alvaro Hernandez; David R Nelson; Harry S Paris; Yaakov Tadmor; Yosef Burger; Efraim Lewinsohn; Nurit Katzir; Arthur Schaffer
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-07       Impact factor: 11.205

10.  Production of bioactive diterpenoids in the euphorbiaceae depends on evolutionarily conserved gene clusters.

Authors:  Andrew J King; Geoffrey D Brown; Alison D Gilday; Tony R Larson; Ian A Graham
Journal:  Plant Cell       Date:  2014-08-29       Impact factor: 11.277

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