Literature DB >> 24675604

Structure determination from powder data without prior indexing, using a similarity measure based on cross-correlation functions.

Stefan Habermehl1, Philipp Mörschel1, Pierre Eisenbrandt1, Sonja M Hammer1, Martin U Schmidt1.   

Abstract

A method to refine organic crystal structures from powder diffraction data with incorrect lattice parameters has been developed. The method is based on the similarity measure developed by de Gelder et al. [J. Comput. Chem. (2001), 22, 273-289], using the cross- and auto-correlation functions of a simulated and an experimental powder pattern. The lattice parameters, molecular position, molecular orientation and selected intramolecular degrees of freedom are optimized until the similarity measure reaches a maximum; subsequently, a Rietveld refinement is carried out. The program FIDEL (FIt with DEviating Lattice parameters) implements this method. The procedure is also suitable for unindexed powder data, powder diagrams of very low quality and powder diagrams of non-phase-pure samples. Various applications are shown, including structure determinations from powder data using crystal structure predictions by standard force-field methods. Other useful applications include the automatic structure determination from powder data starting from the crystal structures of isostructural compounds (e.g. a solvate, hydrate or chemical derivative), or from crystal data measured at a different temperature or pressure.

Keywords:  X-ray powder diffraction; cross-correlation functions; force-field methods

Year:  2014        PMID: 24675604     DOI: 10.1107/S2052520613033994

Source DB:  PubMed          Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater        ISSN: 2052-5192


  6 in total

1.  Ambiguous structure determination from powder data: four different structural models of 4,11-di-fluoro-quinacridone with similar X-ray powder patterns, fit to the PDF, SSNMR and DFT-D.

Authors:  Carina Schlesinger; Arnd Fitterer; Christian Buchsbaum; Stefan Habermehl; Michele R Chierotti; Carlo Nervi; Martin U Schmidt
Journal:  IUCrJ       Date:  2022-05-14       Impact factor: 5.588

2.  Structure determination of organic compounds by a fit to the pair distribution function from scratch without prior indexing.

Authors:  Carina Schlesinger; Stefan Habermehl; Dragica Prill
Journal:  J Appl Crystallogr       Date:  2021-05-09       Impact factor: 3.304

3.  Comparison and evaluation of pair distribution functions, using a similarity measure based on cross-correlation functions.

Authors:  Stefan Habermehl; Carina Schlesinger; Dragica Prill
Journal:  J Appl Crystallogr       Date:  2021-03-31       Impact factor: 4.868

4.  Structure determination from unindexed powder data from scratch by a global optimization approach using pattern comparison based on cross-correlation functions.

Authors:  Stefan Habermehl; Carina Schlesinger; Martin U Schmidt
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2022-03-16

Review 5.  Can computed crystal energy landscapes help understand pharmaceutical solids?

Authors:  Sarah L Price; Doris E Braun; Susan M Reutzel-Edens
Journal:  Chem Commun (Camb)       Date:  2016-04-12       Impact factor: 6.222

Review 6.  Control and prediction of the organic solid state: a challenge to theory and experiment.

Authors:  Sarah L Price
Journal:  Proc Math Phys Eng Sci       Date:  2018-09-19       Impact factor: 2.704

  6 in total

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