Literature DB >> 24671424

A high-throughput device for size based separation of C. elegans developmental stages.

Xiaoni Ai1, Weipeng Zhuo, Qionglin Liang, Patrick T McGrath, Hang Lu.   

Abstract

Caenorhabditis elegans is a widely used model organism to study development, aging and behavior. Many of these biological studies require staging a large number of worms to assay a synchronized population of animals. Conventional synchronization techniques such as manual picking, gravity stratification and chemical bleaching are labor-intensive and could perturb animals' physiology. Thus, there is a need for a simple inexpensive technology to sort a mixed population of worms based on their developmental stages with minimal perturbation. Here we demonstrate a simple but accurate and high-throughput technique to sort based on animal size, which correlates well with developmental stages. The device consists of an array of geometrically optimized pillars that act as a sieve to allow worms of specific sizes to rapidly move through. With optimized chamber heights, pillar spacing and driving pressures, these binary separation devices are capable of independently separating a mixture of worms at two different stages at average efficiency of around 95%, and throughput of hundreds of worms per minute. In addition, when four devices are used sequentially, we demonstrate the ability to stratify a mixture of worms of all developmental stages with >85% overall efficiency.

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Year:  2014        PMID: 24671424      PMCID: PMC4042318          DOI: 10.1039/c3lc51334c

Source DB:  PubMed          Journal:  Lab Chip        ISSN: 1473-0189            Impact factor:   6.799


  31 in total

Review 1.  Fabrication of microfluidic systems in poly(dimethylsiloxane).

Authors:  J C McDonald; D C Duffy; J R Anderson; D T Chiu; H Wu; O J Schueller; G M Whitesides
Journal:  Electrophoresis       Date:  2000-01       Impact factor: 3.535

2.  Microfluidic chamber arrays for whole-organism behavior-based chemical screening.

Authors:  Kwanghun Chung; Mei Zhan; Jagan Srinivasan; Paul W Sternberg; Emily Gong; Frank C Schroeder; Hang Lu
Journal:  Lab Chip       Date:  2011-09-20       Impact factor: 6.799

Review 3.  Dauer.

Authors:  Patrick J Hu
Journal:  WormBook       Date:  2007-08-08

4.  Cell handling using microstructured membranes.

Authors:  Daniel Irimia; Mehmet Toner
Journal:  Lab Chip       Date:  2006-02-08       Impact factor: 6.799

Review 5.  Microfluidics-enabled phenotyping, imaging, and screening of multicellular organisms.

Authors:  Matthew M Crane; Kwanghun Chung; Jeffrey Stirman; Hang Lu
Journal:  Lab Chip       Date:  2010-04-09       Impact factor: 6.799

Review 6.  Techniques for analysis, sorting, and dispensing of C. elegans on the COPAS flow-sorting system.

Authors:  Rock Pulak
Journal:  Methods Mol Biol       Date:  2006

7.  MEC-2 regulates C. elegans DEG/ENaC channels needed for mechanosensation.

Authors:  Miriam B Goodman; Glen G Ernstrom; Dattananda S Chelur; Robert O'Hagan; C Andrea Yao; Martin Chalfie
Journal:  Nature       Date:  2002-02-28       Impact factor: 49.962

8.  Microfluidics for in vivo imaging of neuronal and behavioral activity in Caenorhabditis elegans.

Authors:  Nikos Chronis; Manuel Zimmer; Cornelia I Bargmann
Journal:  Nat Methods       Date:  2007-08-19       Impact factor: 28.547

9.  A sorting strategy for C. elegans based on size-dependent motility and electrotaxis in a micro-structured channel.

Authors:  Bicheng Han; Daeyeon Kim; Ung Hyun Ko; Jennifer H Shin
Journal:  Lab Chip       Date:  2012-10-21       Impact factor: 6.799

10.  Enhanced Caenorhabditis elegans locomotion in a structured microfluidic environment.

Authors:  Sungsu Park; Hyejin Hwang; Seong-Won Nam; Fernando Martinez; Robert H Austin; William S Ryu
Journal:  PLoS One       Date:  2008-06-25       Impact factor: 3.240

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  14 in total

1.  High-throughput, motility-based sorter for microswimmers such as C. elegans.

Authors:  Jinzhou Yuan; Jessie Zhou; David M Raizen; Haim H Bau
Journal:  Lab Chip       Date:  2015-05-26       Impact factor: 6.799

2.  Microfluidic platform integrated with worm-counting setup for assessing manganese toxicity.

Authors:  Beibei Zhang; Yinbao Li; Qidi He; Jun Qin; Yanyan Yu; Xinchun Li; Lin Zhang; Meicun Yao; Junshan Liu; Zuanguang Chen
Journal:  Biomicrofluidics       Date:  2014-09-24       Impact factor: 2.800

3.  A hybrid microfluidic device for on-demand orientation and multidirectional imaging of C. elegans organs and neurons.

Authors:  Ramtin Ardeshiri; Ben Mulcahy; Mei Zhen; Pouya Rezai
Journal:  Biomicrofluidics       Date:  2016-12-01       Impact factor: 2.800

4.  An integrated platform enabling optogenetic illumination of Caenorhabditis elegans neurons and muscular force measurement in microstructured environments.

Authors:  Zhichang Qiu; Long Tu; Liang Huang; Taoyuanmin Zhu; Volker Nock; Enchao Yu; Xiao Liu; Wenhui Wang
Journal:  Biomicrofluidics       Date:  2015-02-19       Impact factor: 2.800

5.  Fluorescence-based sorting of Caenorhabditis elegans via acoustofluidics.

Authors:  Jinxin Zhang; Jessica H Hartman; Chuyi Chen; Shujie Yang; Qi Li; Zhenhua Tian; Po-Hsun Huang; Lin Wang; Joel N Meyer; Tony Jun Huang
Journal:  Lab Chip       Date:  2020-05-19       Impact factor: 6.799

6.  A microfluidic device for automated, high-speed microinjection of Caenorhabditis elegans.

Authors:  Pengfei Song; Xianke Dong; Xinyu Liu
Journal:  Biomicrofluidics       Date:  2016-02-26       Impact factor: 2.800

7.  C. elegans-on-a-chip for in situ and in vivo Ag nanoparticles' uptake and toxicity assay.

Authors:  Jin Ho Kim; Seung Hwan Lee; Yun Jeong Cha; Sung Jin Hong; Sang Kug Chung; Tai Hyun Park; Shin Sik Choi
Journal:  Sci Rep       Date:  2017-01-09       Impact factor: 4.379

8.  The Annona muricata leaf ethanol extract affects mobility and reproduction in mutant strain NB327 Caenorhabditis elegans.

Authors:  A V Gualteros Bustos; M Gómez Jiménez; R M Sánchez Mora
Journal:  Biochem Biophys Rep       Date:  2017-04-24

Review 9.  Microfluidic Approaches for Manipulating, Imaging, and Screening C. elegans.

Authors:  Bhagwati P Gupta; Pouya Rezai
Journal:  Micromachines (Basel)       Date:  2016-07-19       Impact factor: 2.891

Review 10.  Microfluidic Devices in Advanced Caenorhabditis elegans Research.

Authors:  Muniesh Muthaiyan Shanmugam; Tuhin Subhra Santra
Journal:  Molecules       Date:  2016-08-02       Impact factor: 4.411

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