Literature DB >> 24667326

Small non-coding RNAs in streptomycetes.

Nona Heueis1, Michael-Paul Vockenhuber1, Beatrix Suess1.   

Abstract

Streptomycetes are Gram-positive, GC-rich, soil dwelling bacteria, occurring ubiquitary throughout nature. They undergo extensive morphological changes from spores to filamentous mycelia and produce a plethora of secondary metabolites. Owing to their complex life cycle, streptomycetes require efficient regulatory machinery for the control of gene expression. Therefore, they possess a large diversity of regulators. Within this review we summarize the current knowledge about the importance of small non-coding RNA for the control of gene expression in these organisms.

Entities:  

Keywords:  S. coelicolor; Streptomyces; antisense RNA; asRNA; sRNA; small non-coding RNA

Mesh：

Substances：

Year:  2014        PMID： 24667326      PMCID： PMC4152355          DOI： 10.4161/rna.28262

Source DB:  PubMed          Journal:  RNA Biol        ISSN： 1547-6286            Impact factor:   4.652


  28 in total

1.  Streptomyces coelicolor sRNA scr5239 inhibits agarase expression by direct base pairing to the dagA coding region.

Authors:  Michael-Paul Vockenhuber; Beatrix Suess
Journal:  Microbiology       Date:  2011-11-10       Impact factor: 2.777

Review 2.  Cell division and DNA segregation in Streptomyces: how to build a septum in the middle of nowhere?

Authors:  Dagmara Jakimowicz; Gilles P van Wezel
Journal:  Mol Microbiol       Date:  2012-06-11       Impact factor: 3.501

Review 3.  Bioactive microbial metabolites.

Authors:  János Bérdy
Journal:  J Antibiot (Tokyo)       Date:  2005-01       Impact factor: 2.649

4.  Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).

Authors:  S D Bentley; K F Chater; A-M Cerdeño-Tárraga; G L Challis; N R Thomson; K D James; D E Harris; M A Quail; H Kieser; D Harper; A Bateman; S Brown; G Chandra; C W Chen; M Collins; A Cronin; A Fraser; A Goble; J Hidalgo; T Hornsby; S Howarth; C-H Huang; T Kieser; L Larke; L Murphy; K Oliver; S O'Neil; E Rabbinowitsch; M-A Rajandream; K Rutherford; S Rutter; K Seeger; D Saunders; S Sharp; R Squares; S Squares; K Taylor; T Warren; A Wietzorrek; J Woodward; B G Barrell; J Parkhill; D A Hopwood
Journal:  Nature       Date:  2002-05-09       Impact factor: 49.962

5.  Differential regulation of ftsZ transcription during septation of Streptomyces griseus.

Authors:  J Kwak; A J Dharmatilake; H Jiang; K E Kendrick
Journal:  J Bacteriol       Date:  2001-09       Impact factor: 3.490

6.  An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs.

Authors:  Yanjie Chao; Kai Papenfort; Richard Reinhardt; Cynthia M Sharma; Jörg Vogel
Journal:  EMBO J       Date:  2012-08-24       Impact factor: 11.598

7.  Inference of sigma factor controlled networks by using numerical modeling applied to microarray time series data of the germinating prokaryote.

Authors:  Eva Strakova; Alice Zikova; Jiri Vohradsky
Journal:  Nucleic Acids Res       Date:  2013-10-23       Impact factor: 16.971

8.  Transcriptomic analysis of Streptomyces coelicolor differentiation in solid sporulating cultures: first compartmentalized and second multinucleated mycelia have different and distinctive transcriptomes.

Authors:  Paula Yagüe; Antonio Rodríguez-García; María T López-García; Juan F Martín; Beatriz Rioseras; Jesús Sánchez; Angel Manteca
Journal:  PLoS One       Date:  2013-03-28       Impact factor: 3.240

9.  Comparative analysis of non-coding RNAs in the antibiotic-producing Streptomyces bacteria.

Authors:  Matthew J Moody; Rachel A Young; Stephanie E Jones; Marie A Elliot
Journal:  BMC Genomics       Date:  2013-08-16       Impact factor: 3.969

10.  Complex intra-operonic dynamics mediated by a small RNA in Streptomyces coelicolor.

Authors:  Matthew J Moody; Stephanie E Jones; Marie A Elliot
Journal:  PLoS One       Date:  2014-01-20       Impact factor: 3.240
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  6 in total

1.  Identification of metE as a second target of the sRNA scr5239 in Streptomyces coelicolor.

Authors:  Michael-Paul Vockenhuber; Nona Heueis; Beatrix Suess
Journal:  PLoS One       Date:  2015-03-18       Impact factor: 3.240

2.  Mycobacterium tuberculosis 6C sRNA binds multiple mRNA targets via C-rich loops independent of RNA chaperones.

Authors:  Juntao Mai; Chitong Rao; Jacqueline Watt; Xian Sun; Chen Lin; Lu Zhang; Jun Liu
Journal:  Nucleic Acids Res       Date:  2019-05-07       Impact factor: 16.971

3.  Diversity and prevalence of ANTAR RNAs across actinobacteria.

Authors:  Dolly Mehta; Arati Ramesh
Journal:  BMC Microbiol       Date:  2021-05-29       Impact factor: 3.605

4.  Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq).

Authors:  Julia Babski; Karina A Haas; Daniela Näther-Schindler; Friedhelm Pfeiffer; Konrad U Förstner; Matthias Hammelmann; Rolf Hilker; Anke Becker; Cynthia M Sharma; Anita Marchfelder; Jörg Soppa
Journal:  BMC Genomics       Date:  2016-08-12       Impact factor: 3.969

5.  Core non-coding RNAs of Piscirickettsia salmonis.

Authors:  Cristopher Segovia; Raul Arias-Carrasco; Alejandro J Yañez; Vinicius Maracaja-Coutinho; Javier Santander
Journal:  PLoS One       Date:  2018-05-16       Impact factor: 3.240

Review 6.  Omics for Bioprospecting and Drug Discovery from Bacteria and Microalgae.

Authors:  Reuben Maghembe; Donath Damian; Abdalah Makaranga; Stephen Samwel Nyandoro; Sylvester Leonard Lyantagaye; Souvik Kusari; Rajni Hatti-Kaul
Journal:  Antibiotics (Basel)       Date:  2020-05-04
  6 in total

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