Literature DB >> 24666701

Comparison of VITEK2, MALDI-TOF MS, and 16S rDNA sequencing for identification of Myroides odoratus and Myroides odoratimimus.

Percy Schröttner1, Wolfram W Rudolph2, Bodo R Eing3, Sebastian Bertram3, Florian Gunzer4.   

Abstract

The genus Myroides comprises the 2 medically relevant species Myroides odoratus and Myroides odoratimimus that are rare opportunistic pathogens and cause infections in immunocompromised patients. A fast identification of Myroides is of importance because these bacterial strains show multiple resistance against antibiotics and therefore limit treatment options. They are associated, for instance, with urinary tract infections, sepsis, meningitis, pneumonia, and infectious cellulitis. Since more and more Myroides spp. are being described, additional potentially pathogenic bacteria may be identified in the future demanding the need for fast and reliable identification methods at species level. However, to date, only molecular approaches meet these demands. In this study, we, therefore, attempt to define an appropriate method other than DNA fingerprinting that will permit a comparable efficacy and, possibly, a more economical strain identification. For this purpose, we compared 2 widely used automated diagnostic systems (VITEK 2 [bioMérieux, Nürtingen, Germany] and Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) [Bruker Daltonics, Bremen, Germany]) and correlated the results to 16S rDNA sequencing data. In total, we analyzed 22 strains collected in the course of routine diagnostics. In this study, we demonstrate that VITEK 2 reliably identifies the genus Myroides but cannot differentiate between M. odoratimimus and M. odoratus. In contrast to this, both MALDI-TOF MS and 16S rDNA sequencing efficiently distinguish between the 2 species.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Flavobacteriaceae; MALDI-TOF; Molecular sequence analysis; Myroides odoratimimus; Myroides odoratus; VITEK 2

Mesh:

Substances:

Year:  2014        PMID: 24666701     DOI: 10.1016/j.diagmicrobio.2014.02.002

Source DB:  PubMed          Journal:  Diagn Microbiol Infect Dis        ISSN: 0732-8893            Impact factor:   2.803


  15 in total

1.  Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS.

Authors:  Percy Schröttner; Florian Gunzer; Jana Schüppel; Wolfram W Rudolph
Journal:  J Vis Exp       Date:  2016-07-11       Impact factor: 1.355

2.  Microbial communities associated with the co-metabolism of free cyanide and thiocyanate under alkaline conditions.

Authors:  Lukhanyo Mekuto; Seteno Karabo Obed Ntwampe; John Baptist N Mudumbi
Journal:  3 Biotech       Date:  2018-01-24       Impact factor: 2.406

3.  MYROIDES INFECTION IN A BABOON AFTER PROLONGED PIG KIDNEY GRAFT SURVIVAL.

Authors:  Hong Liu; Hayato Iwase; Martin Wijkstrom; Jagjit Singh; Edwin Klein; Robert Wagner; Abhinav Humar; William Pasculle; David K C Cooper
Journal:  Transplant Direct       Date:  2015-05

Review 4.  Antibiotic resistance mechanisms of Myroides sp.

Authors:  Shao-hua Hu; Shu-xing Yuan; Hai Qu; Tao Jiang; Ya-jun Zhou; Ming-xi Wang; De-song Ming
Journal:  J Zhejiang Univ Sci B       Date:  2016-03       Impact factor: 3.066

Review 5.  Recent development of mass spectrometry and proteomics applications in identification and typing of bacteria.

Authors:  Keding Cheng; Huixia Chui; Larissa Domish; Drexler Hernandez; Gehua Wang
Journal:  Proteomics Clin Appl       Date:  2016-02-02       Impact factor: 3.494

6.  Evaluation of MALDI-TOF mass spectrometry and MALDI BioTyper in comparison to 16S rDNA sequencing for the identification of bacteria isolated from Arctic sea water.

Authors:  Anna Maria Timperio; Susanna Gorrasi; Lello Zolla; Massimiliano Fenice
Journal:  PLoS One       Date:  2017-07-24       Impact factor: 3.240

7.  Myroides odoratimimus Forms Structurally Complex and Inherently Antibiotic-Resistant Biofilm in a Wound-Like in vitro Model.

Authors:  Arianna Pompilio; Giuseppe Galardi; Fabio Verginelli; Maurizio Muzzi; Andrea Di Giulio; Giovanni Di Bonaventura
Journal:  Front Microbiol       Date:  2017-12-22       Impact factor: 5.640

8.  Extensively drug-resistant Myroides odoratimimus - a case series of urinary tract infections in immunocompromised patients.

Authors:  Monica Licker; Teodora Sorescu; Maria Rus; Natalia Cirlea; Florin Horhat; Cristiana Jurescu; Mircea Botoca; Alin Cumpănaş; Romulus Timar; Delia Muntean
Journal:  Infect Drug Resist       Date:  2018-05-18       Impact factor: 4.003

9.  MUS-2, a novel variant of the chromosome-encoded β-lactamase MUS-1, from Myroides odoratimimus.

Authors:  C Al-Bayssari; S Kumar Gupta; F Dabboussi; M Hamze; J-M Rolain
Journal:  New Microbes New Infect       Date:  2015-06-27

10.  Whole-genome sequencing of a large collection of Myroides odoratimimus and Myroides odoratus isolates and antimicrobial susceptibility studies.

Authors:  Florian Gunzer; Wolfram W Rudolph; Boyke Bunk; Isabel Schober; Sonja Peters; Theres Müller; Boris Oberheitmann; Percy Schröttner
Journal:  Emerg Microbes Infect       Date:  2018-04-04       Impact factor: 7.163

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