| Literature DB >> 24666463 |
Liping Ma, Jiangyang Zhao, Taijie Li, Yu He, Jian Wang, Li Xie, Xue Qin1, Shan Li.
Abstract
BACKGROUND: Tumor necrosis factor-alpha (TNF-α) is an important inflammatory cytokine that may play a role in controlling the progression of prostate cancer. Two common polymorphisms in the TNF-α gene, -308G/A and -238C/T, have been suggested to alter the risk for prostate cancer, but the results have been inconclusive so far. In order to obtain a better understanding of the effects of these two polymorphisms on prostate cancer risk, all available studies were considered in a meta-analysis.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24666463 PMCID: PMC3977697 DOI: 10.1186/1746-1596-9-74
Source DB: PubMed Journal: Diagn Pathol ISSN: 1746-1596 Impact factor: 2.644
Scale for quality assessment
| 1. Representativeness of cases | |
| Selected from population or cancer registry | 3 |
| Selected from hospital | 2 |
| Selected from pathology archives, but without clearly defined sampling frame or with extensive inclusion/exclusion criteria | 1 |
| Not described | 0 |
| 2. Source of controls | |
| Population- based | 3 |
| Blood donors or volunteers | 2 |
| Hospital-based (cancer -free patients) | 1 |
| Not described | 0 |
| 3. Pecimens of cases determining genotypes | |
| White blood cells or normal tissues | 1 |
| Tumor tissues or exfoliated cells of tissue | 0 |
| 4. Ascertainment of prostate cancer | |
| Histopathologic confirmation | 2 |
| Diagnosis of prostate cancer by patient medical record | 1 |
| Not described | 0 |
| 5. Total sample size | |
| ≧1000 | 3 |
| ≧400 but <1000 | 2 |
| ≧200 but <400 | 1 |
| <200 | 0 |
| 6. Hardy-Weinbe rg equilibrium in controls | |
| Hardy-Wei nberg equilibrium | 1 |
| Hardy-Wei nberg disequilibrium | 0 |
| 7. Quality control of genotyping methods | |
| Repetition of partial/total tested samples | 1 |
| Not described 0 | 0 |
Figure 1Flow diagram of included studies for this meta-analysis.
Characteristics of eligible studies in this meta-analysis
| Ribeiro (2012) | Portugal | Caucasia | TaqMan | HB | 449/557 | Age | HC | No | −308G/A | 0.155 | - | 10 |
| Berhane (2012) | India (N) | Asia | ARMS-PCR | HB | 150/150 | Age | HC | No | −308G/A | 0.662 | - | 10 |
| Wang (2009) | America (W) | mixed | TaqMan | PB | 251/250 | Age, sex,ethnicity | HC | No | −308G/A | 0.529 | - | 12 |
| Moore (2009) | Finland (W) | mixed | TaqMan | PB | 949/857 | Age, sex | HC | Yes | −308G/A | 0.231 | - | 14 |
| Kesarwani (2009) | India (E) | Asia | PCR-RFLP | PB | 197/256 | Age, sex, ethnicity | HC | Yes | −308G/A | 0.115 | - | 13 |
| Zabaleta 1 (2008) | America (W) | Caucasia | TaqMan | HB | 950/785 | Ethnicity | HC | Yes | −308G/A,-238G/A | 0.505 | 0.295 | 10 |
| Zabaleta 2 (2008) | America (W) | African-American | TaqMan | HB | 131/256 | Ethnicity | HC | Yes | −308G/A,-239G/A | 0.959 | 0.006 | 8 |
| Sáenz-López (2008) | Spain | Caucasia | TaqMa | HV | 296/310 | Ethnicity | HC | No | −308G/A | 0.715 | - | 9 |
| Danforth 1 (2008) | America (W) | Caucasia | TaqMan | PB | 1155/1389 | Age | HC | Yes | −308G/A | 0.795 | - | 14 |
| Danforth 2 (2008) | America (W) | Caucasia | TaqMan | PB | 2225/2251 | Age | HC | Yes | −308G/A,-239G/A | 0.217 | 0.737 | 14 |
| Ge (2007) | China | Asia | TaqMan | HB | 490/490 | Age | HC + PC | No | −308G/A | 0.609 | 0.462 | 11 |
| Wu (2004) | China | Asia | PCR | HV | 96/126 | Sex | HC | No | −308G/A,-239G/A | 0.883 | - | 7 |
| McCarron (2002) | UK | Caucasia | PCR | HB | 239/220 | Ethnicity | HC | No | −308G/A | 0.023 | - | 7 |
| OH (2000) | America | Caucasia | PCR | HB | 146/244 | Ethnicity | PC | Yes | −308G/A,-239G/A | 0.554 | 0.091 | 9 |
PI, Polymorphism(s) investigated; QC, Quality control; NA, Not available; PB, Population–based; HB, Hospital–based; HV, healthy-volunteers; HC, Histologically confirmed; PC, Pathologically confirmed; HWE, Hardy–Weinberg equilibrium in control population.
Meta-analysis of the TNF-α gene polymorphisms on prostate cancer risk
| | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TNF-α-308G/A | | | | | | | | | |
| AA vs. GG | Overall | 14 | 0.936 | 0.733-1.195 | 0.595 | F | 16.20 | 19.8 | 0.238 |
| | Caucasia | 8 | 0.762 | 0.569-1.021 | 0.068 | F | 5.68 | 0.0 | 0.461 |
| | Asia | 3 | 1.558 | 0.620-3.419 | 0.346 | F | 4.29 | 30.1 | 0.231 |
| | Mix | 2 | 1.616 | 0.917-2.848 | 0.097 | F | 0.11 | 0.0 | 0.736 |
| | African-American | 1 | 1.119 | 0.181-6.903 | 0.904 | - | - | - | - |
| | PB | 5 | 0.886 | 0.660-1.190 | 0.422 | F | 6.72 | 40.5 | 0.152 |
| | HB | 7 | 0.924 | 0.557-1.481 | 0.743 | F | 6.76 | 11.2 | 0.344 |
| | HV | 2 | 2.861 | 0.732-11.181 | 0.131 | F | 0.00 | 0.0 | 0.979 |
| AG vs. GG | Overall | 14 | 1.105 | 0.932-1.309 | 0.251 | R | 41.38 | 68.6 | <0.001 |
| | Caucasia | 7 | 1.234 | 0.965-1.600 | 0.092 | R | 31.63 | 81.0 | <0.001 |
| | Asia | 4 | 0.928 | 0.699-1.234 | 0.608 | F | 4.12 | 27.2 | 0.249 |
| | Mix | 2 | 1.065 | 0.882-1.288 | 0.512 | F | 0.70 | 0.0 | 0.404 |
| | African-American | 1 | 0.458 | 0.204-1.027 | 0.058 | - | - | - | - |
| | PB | 5 | 0.997 | 0.899-1.106 | 0.958 | F | 3.39 | 0.0 | 0.495 |
| | HB | 7 | 1.174 | 0.709-1.746 | 0.428 | R | 32.78 | 81.7 | <0.001 |
| | HV | 2 | 1.477 | 1.047-2.085 | 0.026 | F | 0.27 | 0.0 | 0.602 |
| AA + AG vs. GG | Overall | 14 | 1.103 | 0.932-1.306 | 0.254 | R | 43.71 | 70.3 | <0.001 |
| | Caucasia | 8 | 1.206 | 0.941-1.545 | 0.138 | R | 32.21 | 81.4 | <0.001 |
| | Asia | 3 | 1.008 | 0.657-1.547 | 0.97 | R | 6.83 | 56.1 | 0.078 |
| | Mix | 2 | 1.101 | 0.916-1.323 | 0.304 | F | 0.63 | 0.0 | 0.429 |
| | African-American | 1 | 0.513 | 0.242-1.088 | 0.082 | - | - | - | - |
| | PB | 5 | 0.987 | 0.892-1.091 | 0.799 | F | 4.96 | 19.4 | 0.291 |
| | HB | 7 | 1.174 | 0.803-1.719 | 0.408 | R | 32.22 | 81.4 | <0.001 |
| | HV | 2 | 1.531 | 1.093-2.145 | 0.013 | F | 0.24 | 0.0 | 0.628 |
| AA vs. GG + AG | Overall | 14 | 0.92 | 0.721-1.172 | 0.502 | F | 16.2 | 19.7 | 0.239 |
| | Caucasia | 7 | 0.748 | 0.559-1.001 | 0.051 | F | 5.93 | 0.0 | 0.431 |
| | Asia | 4 | 1.559 | 0.618-3.935 | 0.347 | F | 3.98 | 24.7 | 0.263 |
| | Mix | 2 | 1.569 | 0.893-2.757 | 0.117 | F | 0.19 | 0.0 | 0.660 |
| | African-American | 1 | 1.303 | 0.212-7.991 | 0.775 | - | - | - | - |
| | PB | 5 | 0.883 | 0.659-1.184 | 0.407 | F | 6.26 | 36.1 | 0.181 |
| | HB | 7 | 0.886 | 0.555-1.413 | 0.611 | F | 7.49 | 19.9 | 0.278 |
| | HV | 2 | 2.65 | 0.679-10.341 | 0.161 | F | 0.00 | 0.0 | 0.997 |
| TNF-α-238G/A | | | | | | | | | |
| AA vs. GG | Overall | 4 | 1.09 | 0.403-2.943 | 0.866 | F | 4.61 | 34.9 | 0.203 |
| | Caucasia | 3 | 1.29 | 0.436-3.816 | 0.645 | F | 4.35 | 54.1 | 0.113 |
| | African-American | 1 | 0.391 | 0.018-8.288 | 0.547 | - | - | - | - |
| | HB | 3 | 1.579 | 0.492-5.071 | 0.442 | F | 3.750 | 46.7 | 0.153 |
| | PB | 1 | 0.344 | 0.036-3.310 | 0.355 | - | - | - | - |
| AG vs. GG | Overall | 5 | 1.07 | 0.680-1.683 | 0.77 | R | 12.49 | 68.0 | 0.014 |
| | Caucasia | 3 | 1.284 | 0.841-2.025 | 0.282 | R | 5.99 | 66.6 | 0.050 |
| | Asia | 1 | 0.431 | 0.200-0.931 | 0.032 | - | - | - | - |
| | African-American | 1 | 1.179 | 0.408-3.405 | 0.706 | - | - | - | - |
| | HB | 4 | 1.008 | 0.506-2.010 | 0.981 | R | 11.3 | 73.4 | 0.01 |
| | PB | 1 | 1.248 | 0.944-1.649 | 0.12 | - | - | - | - |
| AA + AG vs. GG | Overall | 5 | 1.06 | 0.713-1.575 | 0.774 | R | 9.95 | 59.8 | 0.041 |
| | Caucasia | 3 | 1.226 | 0.982-1.531 | 0.072 | F | 3.33 | 39.9 | 0.189 |
| | Asia | 1 | 0.431 | 0.200-0.931 | 0.032 | - | - | - | - |
| | African-American | 1 | 0.983 | 0.351-2.752 | 0.974 | - | - | - | - |
| | HB | 4 | 0.984 | 0.535-1.808 | 0.958 | R | 9.170 | 67.3 | 0.027 |
| | PB | 1 | 1.221 | 0.926-1.610 | 0.156 | - | - | - | - |
| AA vs. GG + AG | Overall | 4 | 1.036 | 0.388-2.767 | 0.943 | F | 4.9 | 38.2 | 0.182 |
| | Caucasia | 3 | 0.892 | 0.084-9.494 | 0.925 | R | 4.63 | 56.8 | 0.099 |
| | African-American | 1 | 0.386 | 0.018-8.161 | 0.541 | - | - | - | - |
| | HB | 3 | 1.468 | 0.467-4.615 | 0.511 | F | 4.050 | 50.6 | 0.132 |
| PB | 1 | 0.336 | 0.035-3.238 | 0.346 | - | - | - | - | |
Figure 2Forest plots of TNF-α gene polymorphisms and prostate cancer risk. a Forest plots of TNF-α-308G/A polymorphism and prostate cancer risk (AA + AG vs. GG), b Forest plots of TNF-α-238G/A polymorphism and prostate cancer risk (AA + AG vs. GG).
Figure 3Galbraith plots of TNF-α-308G/A polymorphism and prostate cancer risk in different contrast models. a The studies of OH et al., Sáenz-López et al. were outliers in dominant models AA + AG vs. GG. b OH et al. was outlier in additive model AG vs. GG.
Figure 4Funnel plot for the detection of the publication bias in this meta-analysis. a Funnel plot for contrast AA + AG vs. GG of TNF-α-308G/A polymorphism in overall analysis; b Funnel plot for contrast AA + AG vs. GG of TNF-α-238G/A polymorphism in overall analysis.