Literature DB >> 24658234

Evaluation of statistical inference on empirical resting state fMRI.

Xue Yang, Hakmook Kang, Allen T Newton, Bennett A Landman.   

Abstract

Modern statistical inference techniques may be able to improve the sensitivity and specificity of resting state functional magnetic resonance imaging (rs-fMRI) connectivity analysis through more realistic assumptions. In simulation, the advantages of such methods are readily demonstrable. However, quantitative empirical validation remains elusive in vivo as the true connectivity patterns are unknown and noise distributions are challenging to characterize, especially in ultra-high field (e.g., 7T fMRI). Though the physiological characteristics of the fMRI signal are difficult to replicate in controlled phantom studies, it is critical that the performance of statistical techniques be evaluated. The SIMulation EXtrapolation (SIMEX) method has enabled estimation of bias with asymptotically consistent estimators on empirical finite sample data by adding simulated noise . To avoid the requirement of accurate estimation of noise structure, the proposed quantitative evaluation approach leverages the theoretical core of SIMEX to study the properties of inference methods in the face of diminishing data (in contrast to increasing noise). The performance of ordinary and robust inference methods in simulation and empirical rs-fMRI are compared using the proposed quantitative evaluation approach. This study provides a simple, but powerful method for comparing a proxy for inference accuracy using empirical data.

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Year:  2014        PMID: 24658234      PMCID: PMC5826557          DOI: 10.1109/TBME.2013.2294013

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  33 in total

1.  A robust mixed linear model analysis for longitudinal data.

Authors:  P S Gill
Journal:  Stat Med       Date:  2000-04-15       Impact factor: 2.373

2.  The evaluation of preprocessing choices in single-subject BOLD fMRI using NPAIRS performance metrics.

Authors:  Stephen LaConte; Jon Anderson; Suraj Muley; James Ashe; Sally Frutiger; Kelly Rehm; Lars Kai Hansen; Essa Yacoub; Xiaoping Hu; David Rottenberg; Stephen Strother
Journal:  Neuroimage       Date:  2003-01       Impact factor: 6.556

Review 3.  Exploring the brain network: a review on resting-state fMRI functional connectivity.

Authors:  Martijn P van den Heuvel; Hilleke E Hulshoff Pol
Journal:  Eur Neuropsychopharmacol       Date:  2010-05-14       Impact factor: 4.600

4.  A mutual information-based metric for evaluation of fMRI data-processing approaches.

Authors:  Babak Afshin-Pour; Hamid Soltanian-Zadeh; Gholam-Ali Hossein-Zadeh; Cheryl L Grady; Stephen C Strother
Journal:  Hum Brain Mapp       Date:  2011-05       Impact factor: 5.038

5.  Comparison of physiological noise at 1.5 T, 3 T and 7 T and optimization of fMRI acquisition parameters.

Authors:  C Triantafyllou; R D Hoge; G Krueger; C J Wiggins; A Potthast; G C Wiggins; L L Wald
Journal:  Neuroimage       Date:  2005-05-15       Impact factor: 6.556

6.  A general method for dealing with misclassification in regression: the misclassification SIMEX.

Authors:  Helmut Küchenhoff; Samuel M Mwalili; Emmanuel Lesaffre
Journal:  Biometrics       Date:  2006-03       Impact factor: 2.571

7.  Analysis of fMRI time-series revisited.

Authors:  K J Friston; A P Holmes; J B Poline; P J Grasby; S C Williams; R S Frackowiak; R Turner
Journal:  Neuroimage       Date:  1995-03       Impact factor: 6.556

8.  Improving measurement of functional connectivity through decreasing partial volume effects at 7 T.

Authors:  Allen T Newton; Baxter P Rogers; John C Gore; Victoria L Morgan
Journal:  Neuroimage       Date:  2011-09-08       Impact factor: 6.556

Review 9.  Applications of fMRI in translational medicine and clinical practice.

Authors:  Paul M Matthews; Garry D Honey; Edward T Bullmore
Journal:  Nat Rev Neurosci       Date:  2006-09       Impact factor: 34.870

10.  BOLD Noise Assumptions in fMRI.

Authors:  Alle Meije Wink; Jos B T M Roerdink
Journal:  Int J Biomed Imaging       Date:  2006-07-30
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  4 in total

1.  A Bayesian Double Fusion Model for Resting-State Brain Connectivity Using Joint Functional and Structural Data.

Authors:  Hakmook Kang; Hernando Ombao; Christopher Fonnesbeck; Zhaohua Ding; Victoria L Morgan
Journal:  Brain Connect       Date:  2017-04-24

2.  Noninvasive Electromagnetic Source Imaging and Granger Causality Analysis: An Electrophysiological Connectome (eConnectome) Approach.

Authors:  Abbas Sohrabpour; Shuai Ye; Gregory A Worrell; Wenbo Zhang; Bin He
Journal:  IEEE Trans Biomed Eng       Date:  2016-10-11       Impact factor: 4.538

3.  Double-wavelet transform for multisubject task-induced functional magnetic resonance imaging data.

Authors:  Minchun Zhou; David Badre; Hakmook Kang
Journal:  Biometrics       Date:  2019-04-17       Impact factor: 2.571

4.  A high resolution 7-Tesla resting-state fMRI test-retest dataset with cognitive and physiological measures.

Authors:  Krzysztof J Gorgolewski; Natacha Mendes; Domenica Wilfling; Elisabeth Wladimirow; Claudine J Gauthier; Tyler Bonnen; Florence J M Ruby; Robert Trampel; Pierre-Louis Bazin; Roberto Cozatl; Jonathan Smallwood; Daniel S Margulies
Journal:  Sci Data       Date:  2015-01-20       Impact factor: 6.444

  4 in total

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