Literature DB >> 24658140

The mammalian-membrane two-hybrid assay (MaMTH) for probing membrane-protein interactions in human cells.

Julia Petschnigg1, Bella Groisman1, Max Kotlyar2, Mikko Taipale3, Yong Zheng4, Christoph F Kurat5, Azin Sayad1, J Rafael Sierra2, Mojca Mattiazzi Usaj1, Jamie Snider1, Alex Nachman1, Irina Krykbaeva3, Ming-Sound Tsao6, Jason Moffat7, Tony Pawson8, Susan Lindquist9, Igor Jurisica10, Igor Stagljar11.   

Abstract

Cell signaling, one of key processes in both normal cellular function and disease, is coordinated by numerous interactions between membrane proteins that change in response to stimuli. We present a split ubiquitin-based method for detection of integral membrane protein-protein interactions (PPIs) in human cells, termed mammalian-membrane two-hybrid assay (MaMTH). We show that this technology detects stimulus (hormone or agonist)-dependent and phosphorylation-dependent PPIs. MaMTH can detect changes in PPIs conferred by mutations such as those in oncogenic ErbB receptor variants or by treatment with drugs such as the tyrosine kinase inhibitor erlotinib. Using MaMTH as a screening assay, we identified CRKII as an interactor of oncogenic EGFR(L858R) and showed that CRKII promotes persistent activation of aberrant signaling in non-small cell lung cancer cells. MaMTH is a powerful tool for investigating the dynamic interactomes of human integral membrane proteins.

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Year:  2014        PMID: 24658140     DOI: 10.1038/nmeth.2895

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  47 in total

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Authors:  T J Stevens; I T Arkin
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2.  A new method for the selection of protein interactions in mammalian cells.

Authors:  E Rojo-Niersbach; D Morley; S Heck; N Lehming
Journal:  Biochem J       Date:  2000-06-15       Impact factor: 3.857

3.  Monitoring regulated protein-protein interactions using split TEV.

Authors:  Michael C Wehr; Rico Laage; Ulrike Bolz; Tobias M Fischer; Sylvia Grünewald; Sigrid Scheek; Alfred Bach; Klaus-Armin Nave; Moritz J Rossner
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4.  Essential gene profiles in breast, pancreatic, and ovarian cancer cells.

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Journal:  Cancer Discov       Date:  2011-12-29       Impact factor: 39.397

5.  A nondegenerate penalized likelihood estimator for variance parameters in multilevel models.

Authors:  Yeojin Chung; Sophia Rabe-Hesketh; Vincent Dorie; Andrew Gelman; Jingchen Liu
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Review 6.  Understanding prognostic gene expression signatures in lung cancer.

Authors:  Chang-Qi Zhu; Melania Pintilie; Thomas John; Dan Strumpf; Frances A Shepherd; Sandy D Der; Igor Jurisica; Ming-Sound Tsao
Journal:  Clin Lung Cancer       Date:  2009-09       Impact factor: 4.785

7.  GAL4-VP16 is an unusually potent transcriptional activator.

Authors:  I Sadowski; J Ma; S Triezenberg; M Ptashne
Journal:  Nature       Date:  1988-10-06       Impact factor: 49.962

Review 8.  Oncogenes in cell survival and cell death.

Authors:  Jake Shortt; Ricky W Johnstone
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-12-01       Impact factor: 10.005

9.  A genetic system based on split-ubiquitin for the analysis of interactions between membrane proteins in vivo.

Authors:  I Stagljar; C Korostensky; N Johnsson; S te Heesen
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

10.  Regulation of epidermal growth factor receptor trafficking by lysine deacetylase HDAC6.

Authors:  Yonathan Lissanu Deribe; Philipp Wild; Akhila Chandrashaker; Jasna Curak; Mirko H H Schmidt; Yannis Kalaidzidis; Natasa Milutinovic; Irina Kratchmarova; Lukas Buerkle; Michael J Fetchko; Philipp Schmidt; Saranya Kittanakom; Kevin R Brown; Igor Jurisica; Blagoy Blagoev; Marino Zerial; Igor Stagljar; Ivan Dikic
Journal:  Sci Signal       Date:  2009-12-22       Impact factor: 8.192

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  58 in total

1.  A Multireporter Bacterial 2-Hybrid Assay for the High-Throughput and Dynamic Assay of PDZ Domain-Peptide Interactions.

Authors:  David M Ichikawa; Carles Corbi-Verge; Michael J Shen; Jamie Snider; Victoria Wong; Igor Stagljar; Philip M Kim; Marcus B Noyes
Journal:  ACS Synth Biol       Date:  2019-04-18       Impact factor: 5.110

2.  Multiple functions of protein phosphatases in receptor tyrosine kinase signaling revealed by interactome analysis.

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Journal:  Mol Cell Oncol       Date:  2017-02-26

3.  A Comprehensive Membrane Interactome Mapping of Sho1p Reveals Fps1p as a Novel Key Player in the Regulation of the HOG Pathway in S. cerevisiae.

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Journal:  J Mol Biol       Date:  2015-01-30       Impact factor: 5.469

Review 4.  Application of the conventional and novel methods in testing EGFR variants for NSCLC patients in the last 10 years through different regions: a systematic review.

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Journal:  Mol Biol Rep       Date:  2021-05-10       Impact factor: 2.316

5.  Application guide for omics approaches to cell signaling.

Authors:  Zhong Yao; Julia Petschnigg; Robin Ketteler; Igor Stagljar
Journal:  Nat Chem Biol       Date:  2015-05-15       Impact factor: 15.040

6.  In silico prediction of physical protein interactions and characterization of interactome orphans.

Authors:  Max Kotlyar; Chiara Pastrello; Flavia Pivetta; Alessandra Lo Sardo; Christian Cumbaa; Han Li; Taline Naranian; Yun Niu; Zhiyong Ding; Fatemeh Vafaee; Fiona Broackes-Carter; Julia Petschnigg; Gordon B Mills; Andrea Jurisicova; Igor Stagljar; Roberta Maestro; Igor Jurisica
Journal:  Nat Methods       Date:  2014-11-17       Impact factor: 28.547

Review 7.  On the cutting edge: protease-based methods for sensing and controlling cell biology.

Authors:  H Kay Chung; Michael Z Lin
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8.  A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome.

Authors:  Zhong Yao; Katelyn Darowski; Nicole St-Denis; Victoria Wong; Fabian Offensperger; Annabel Villedieu; Shahreen Amin; Ramy Malty; Hiroyuki Aoki; Hongbo Guo; Yang Xu; Caterina Iorio; Max Kotlyar; Andrew Emili; Igor Jurisica; Benjamin G Neel; Mohan Babu; Anne-Claude Gingras; Igor Stagljar
Journal:  Mol Cell       Date:  2017-01-05       Impact factor: 17.970

9.  The RTK Interactome: Overview and Perspective on RTK Heterointeractions.

Authors:  Michael D Paul; Kalina Hristova
Journal:  Chem Rev       Date:  2018-12-27       Impact factor: 60.622

Review 10.  How do oncoprotein mutations rewire protein-protein interaction networks?

Authors:  Emily H Bowler; Zhenghe Wang; Rob M Ewing
Journal:  Expert Rev Proteomics       Date:  2015-09-01       Impact factor: 3.940

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