Literature DB >> 24655503

Structural determinants of water permeation through the sodium-galactose transporter vSGLT.

Joshua L Adelman1, Ying Sheng1, Seungho Choe2, Jeff Abramson3, Ernest M Wright3, John M Rosenberg4, Michael Grabe5.   

Abstract

Sodium-glucose transporters (SGLTs) facilitate the movement of water across the cell membrane, playing a central role in cellular homeostasis. Here, we present a detailed analysis of the mechanism of water permeation through the inward-facing state of vSGLT based on nearly 10 μs of molecular dynamics simulations. These simulations reveal the transient formation of a continuous water channel through the transporter that permits water to permeate the protein. Trajectories in which spontaneous release of galactose is observed, as well as those in which galactose remains in the binding site, show that the permeation rate, although modulated by substrate occupancy, is not tightly coupled to substrate release. Using a, to our knowledge, novel channel-detection algorithm, we identify the key residues that control water flow through the transporter and show that solvent gating is regulated by side-chain motions in a small number of residues on the extracellular face. A sequence alignment reveals the presence of two insertion sites in mammalian SGLTs that flank these outer-gate residues. We hypothesize that the absence of these sites in vSGLT may account for the high water permeability values for vSGLT determined via simulation compared to the lower experimental estimates for mammalian SGLT1.
Copyright © 2014 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 24655503      PMCID: PMC3984995          DOI: 10.1016/j.bpj.2014.01.006

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  52 in total

1.  Molecular characterization of Vibrio parahaemolyticus vSGLT: a model for sodium-coupled sugar cotransporters.

Authors:  E Turk; O Kim; J le Coutre; J P Whitelegge; S Eskandari; J T Lam; M Kreman; G Zampighi; K F Faull; E M Wright
Journal:  J Biol Chem       Date:  2000-08-18       Impact factor: 5.157

2.  Functional expression of the Vibrio parahaemolyticus Na+/galactose (vSGLT) cotransporter in Xenopus laevis oocytes.

Authors:  D W Leung; E Turk; O Kim; E M Wright
Journal:  J Membr Biol       Date:  2002-05-01       Impact factor: 1.843

3.  Simulations of the alternating access mechanism of the sodium symporter Mhp1.

Authors:  Joshua L Adelman; Amy L Dale; Matthew C Zwier; Divesh Bhatt; Lillian T Chong; Daniel M Zuckerman; Michael Grabe
Journal:  Biophys J       Date:  2011-11-15       Impact factor: 4.033

4.  Imaging alpha-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map.

Authors:  Aleksij Aksimentiev; Klaus Schulten
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

5.  Transient formation of water-conducting states in membrane transporters.

Authors:  Jing Li; Saher A Shaikh; Giray Enkavi; Po-Chao Wen; Zhijian Huang; Emad Tajkhorshid
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-22       Impact factor: 11.205

6.  Bridging the gap between structure and kinetics of human SGLT1.

Authors:  Monica Sala-Rabanal; Bruce A Hirayama; Donald D F Loo; Vincent Chaptal; Jeff Abramson; Ernest M Wright
Journal:  Am J Physiol Cell Physiol       Date:  2011-12-07       Impact factor: 4.249

Review 7.  Water transport in the brain: role of cotransporters.

Authors:  N MacAulay; S Hamann; T Zeuthen
Journal:  Neuroscience       Date:  2004       Impact factor: 3.590

8.  3V: cavity, channel and cleft volume calculator and extractor.

Authors:  Neil R Voss; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2010-05-16       Impact factor: 16.971

Review 9.  Water-transporting proteins.

Authors:  Thomas Zeuthen
Journal:  J Membr Biol       Date:  2009-11-30       Impact factor: 1.843

Review 10.  Water pumps.

Authors:  Donald D F Loo; Ernest M Wright; Thomas Zeuthen
Journal:  J Physiol       Date:  2002-07-01       Impact factor: 5.182

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  16 in total

1.  Computational Estimation of Microsecond to Second Atomistic Folding Times.

Authors:  Upendra Adhikari; Barmak Mostofian; Jeremy Copperman; Sundar Raman Subramanian; Andrew A Petersen; Daniel M Zuckerman
Journal:  J Am Chem Soc       Date:  2019-04-12       Impact factor: 15.419

2.  How does water pass through a sugar transporter?

Authors:  Fangqiang Zhu
Journal:  Biophys J       Date:  2014-03-18       Impact factor: 4.033

3.  Stochastic steps in secondary active sugar transport.

Authors:  Joshua L Adelman; Chiara Ghezzi; Paola Bisignano; Donald D F Loo; Seungho Choe; Jeff Abramson; John M Rosenberg; Ernest M Wright; Michael Grabe
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-20       Impact factor: 11.205

Review 4.  Directional Fluid Transport across Organ-Blood Barriers: Physiology and Cell Biology.

Authors:  Paulo S Caceres; Ignacio Benedicto; Guillermo L Lehmann; Enrique J Rodriguez-Boulan
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-03-01       Impact factor: 10.005

5.  Structural and functional significance of water permeation through cotransporters.

Authors:  Thomas Zeuthen; Edurne Gorraitz; Ka Her; Ernest M Wright; Donald D F Loo
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-18       Impact factor: 11.205

6.  Membrane Protein Properties Revealed through Data-Rich Electrostatics Calculations.

Authors:  Frank V Marcoline; Neville Bethel; Christopher J Guerriero; Jeffrey L Brodsky; Michael Grabe
Journal:  Structure       Date:  2015-06-25       Impact factor: 5.006

7.  Mapping of Ion and Substrate Binding Sites in Human Sodium Iodide Symporter (hNIS).

Authors:  Hristina R Zhekova; Toshie Sakuma; Ryan Johnson; Susanna C Concilio; Patrycja J Lech; Igor Zdravkovic; Mirna Damergi; Lukkana Suksanpaisan; Kah-Whye Peng; Stephen J Russell; Sergei Noskov
Journal:  J Chem Inf Model       Date:  2020-03-12       Impact factor: 4.956

Review 8.  Computational characterization of structural dynamics underlying function in active membrane transporters.

Authors:  Jing Li; Po-Chao Wen; Mahmoud Moradi; Emad Tajkhorshid
Journal:  Curr Opin Struct Biol       Date:  2015-04-27       Impact factor: 6.809

Review 9.  Novel and Unexpected Functions of SGLTs.

Authors:  Ernest M Wright; Chiara Ghezzi; Donald D F Loo
Journal:  Physiology (Bethesda)       Date:  2017-11

10.  The Sodium Glucose Cotransporter SGLT1 Is an Extremely Efficient Facilitator of Passive Water Transport.

Authors:  Liudmila Erokhova; Andreas Horner; Nicole Ollinger; Christine Siligan; Peter Pohl
Journal:  J Biol Chem       Date:  2016-03-04       Impact factor: 5.157

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