Literature DB >> 24650912

Evolution: dynamics of de novo gene emergence.

Rafik Neme1, Diethard Tautz2.   

Abstract

Comparative genomics have brought much insight into the de novo emergence of genes. Two new studies in Drosophila explore the dynamics of gene gain and loss at the population and species levels, extending our view on the life cycle of genes.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID： 24650912     DOI： 10.1016/j.cub.2014.02.016

Source DB:  PubMed          Journal:  Curr Biol        ISSN： 0960-9822            Impact factor:   10.834


  30 in total

1.  Multi-step formation, evolution, and functionalization of new cytoplasmic male sterility genes in the plant mitochondrial genomes.

Authors:  Huiwu Tang; Xingmei Zheng; Chuliang Li; Xianrong Xie; Yuanling Chen; Letian Chen; Xiucai Zhao; Huiqi Zheng; Jiajian Zhou; Shan Ye; Jingxin Guo; Yao-Guang Liu
Journal:  Cell Res       Date:  2016-10-11       Impact factor: 25.617

Review 2.  Open questions in the study of de novo genes: what, how and why.

Authors:  Aoife McLysaght; Laurence D Hurst
Journal:  Nat Rev Genet       Date:  2016-07-25       Impact factor: 53.242

Review 3.  Encoding activities of non-coding RNAs.

Authors:  Yanan Pang; Chuanbin Mao; Shanrong Liu
Journal:  Theranostics       Date:  2018-03-28       Impact factor: 11.556

4.  Genome-wide analysis reveals diverged patterns of codon bias, gene expression, and rates of sequence evolution in picea gene families.

Authors:  Amanda R De La Torre; Yao-Cheng Lin; Yves Van de Peer; Pär K Ingvarsson
Journal:  Genome Biol Evol       Date:  2015-03-05       Impact factor: 3.416

5.  Emergence, Retention and Selection: A Trilogy of Origination for Functional De Novo Proteins from Ancestral LncRNAs in Primates.

Authors:  Jia-Yu Chen; Qing Sunny Shen; Wei-Zhen Zhou; Jiguang Peng; Bin Z He; Yumei Li; Chu-Jun Liu; Xuke Luan; Wanqiu Ding; Shuxian Li; Chunyan Chen; Bertrand Chin-Ming Tan; Yong E Zhang; Aibin He; Chuan-Yun Li
Journal:  PLoS Genet       Date:  2015-07-15       Impact factor: 5.917

6.  Divergence patterns of genic copy number variation in natural populations of the house mouse (Mus musculus domesticus) reveal three conserved genes with major population-specific expansions.

Authors:  Željka Pezer; Bettina Harr; Meike Teschke; Hiba Babiker; Diethard Tautz
Journal:  Genome Res       Date:  2015-07-06       Impact factor: 9.043

7.  Did androgen-binding protein paralogs undergo neo- and/or Subfunctionalization as the Abp gene region expanded in the mouse genome?

Authors:  Robert C Karn; Amanda G Chung; Christina M Laukaitis
Journal:  PLoS One       Date:  2014-12-22       Impact factor: 3.240

8.  Long non-coding RNAs as a source of new peptides.

Authors:  Jorge Ruiz-Orera; Xavier Messeguer; Juan Antonio Subirana; M Mar Alba
Journal:  Elife       Date:  2014-09-16       Impact factor: 8.140

9.  Origin and evolution of developmental enhancers in the mammalian neocortex.

Authors:  Deena Emera; Jun Yin; Steven K Reilly; Jake Gockley; James P Noonan
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-25       Impact factor: 11.205

Review 10.  New genes from non-coding sequence: the role of de novo protein-coding genes in eukaryotic evolutionary innovation.

Authors:  Aoife McLysaght; Daniele Guerzoni
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-09-26       Impact factor: 6.237
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