Literature DB >> 24647076

How yeast can be used as a genetic platform to explore virus-host interactions: from 'omics' to functional studies.

Peter D Nagy1, Judit Pogany2, Jing-Yi Lin3.   

Abstract

The yeast Saccharomyces cerevisiae is an advanced model organism that has emerged as an effective host to gain insights into the intricate interactions of viruses with host cells. RNA viruses have limited coding potential and need to coopt numerous host cellular factors to facilitate their replication. To identify the host factors subverted by viruses, high-throughput genomics and global proteomics approaches have been performed with plant viruses such as brome mosaic virus (BMV) and tomato bushy stunt virus (TBSV). Accordingly, several hundred susceptibility and restriction factors for BMV and TBSV have been identified using yeast as a model host. Amazingly, host factors affecting viral genetic recombination and evolution have also been identified in genome-wide screens in yeast. The roles of many yeast host factors involved in various steps of the viral replication process have been validated by exploiting the orthologous genes in plant hosts. This Opinion summarizes the advantages of using simple viruses and yeast model host to advance our general understanding of virus-host interactions. The knowledge gained on host factors could lead to novel specific or broad-range resistance and antiviral tools against viruses.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  RNA–protein interaction; genome-wide screens; host factors; protein–protein interaction; viral replicase complex; virus replication; yeast as a host

Mesh:

Year:  2014        PMID: 24647076     DOI: 10.1016/j.tim.2014.02.003

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  30 in total

1.  Phytopathogenic fungus hosts a plant virus: A naturally occurring cross-kingdom viral infection.

Authors:  Ida Bagus Andika; Shuang Wei; Chunmei Cao; Lakha Salaipeth; Hideki Kondo; Liying Sun
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-30       Impact factor: 11.205

2.  Conserved motifs in a tombusvirus polymerase modulate genome replication, subgenomic transcription, and amplification of defective interfering RNAs.

Authors:  Chaminda D Gunawardene; Karolina Jaluba; K Andrew White
Journal:  J Virol       Date:  2015-01-07       Impact factor: 5.103

3.  RNA virus replication depends on enrichment of phosphatidylethanolamine at replication sites in subcellular membranes.

Authors:  Kai Xu; Peter D Nagy
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-25       Impact factor: 11.205

4.  Reconstitution of an RNA Virus Replicase in Artificial Giant Unilamellar Vesicles Supports Full Replication and Provides Protection for the Double-Stranded RNA Replication Intermediate.

Authors:  Nikolay Kovalev; Judit Pogany; Peter D Nagy
Journal:  J Virol       Date:  2020-08-31       Impact factor: 5.103

Review 5.  Viral sensing of the subcellular environment regulates the assembly of new viral replicase complexes during the course of infection.

Authors:  Peter D Nagy
Journal:  J Virol       Date:  2015-03-04       Impact factor: 5.103

6.  Sterol Binding by the Tombusviral Replication Proteins Is Essential for Replication in Yeast and Plants.

Authors:  Kai Xu; Peter D Nagy
Journal:  J Virol       Date:  2017-03-13       Impact factor: 5.103

7.  Screening Legionella effectors for antiviral effects reveals Rab1 GTPase as a proviral factor coopted for tombusvirus replication.

Authors:  Jun-Ichi Inaba; Kai Xu; Nikolay Kovalev; Harish Ramanathan; Craig R Roy; Brett D Lindenbach; Peter D Nagy
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-07       Impact factor: 11.205

8.  Activation of Tomato Bushy Stunt Virus RNA-Dependent RNA Polymerase by Cellular Heat Shock Protein 70 Is Enhanced by Phospholipids In Vitro.

Authors:  Judit Pogany; Peter D Nagy
Journal:  J Virol       Date:  2015-03-11       Impact factor: 5.103

Review 9.  Hunting Viral Receptors Using Haploid Cells.

Authors:  Sirika Pillay; Jan E Carette
Journal:  Annu Rev Virol       Date:  2015-07-02       Impact factor: 10.431

Review 10.  Contribution of yeast models to virus research.

Authors:  R Sahaya Glingston; Jyoti Yadav; Jitika Rajpoot; Neha Joshi; Shirisha Nagotu
Journal:  Appl Microbiol Biotechnol       Date:  2021-06-04       Impact factor: 4.813

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