Literature DB >> 26958914

Hunting Viral Receptors Using Haploid Cells.

Sirika Pillay1, Jan E Carette1.   

Abstract

Viruses have evolved intricate mechanisms to gain entry into the host cell. Identification of host proteins that serve as viral receptors has enabled insights into virus particle internalization, host and tissue tropism, and viral pathogenesis. In this review we discuss the most commonly employed methods for virus receptor discovery, specifically highlighting the use of forward genetic screens in human haploid cells. The ability to generate true knockout alleles at high saturation provides a sensitive means to study virus-host interactions. To illustrate the power of such haploid genetic screens, we highlight the discovery of the lysosomal proteins NPC1 and LAMP1 as intracellular receptors for Ebola virus and Lassa virus, respectively. From these studies emerges the notion that receptor usage by these viruses is highly dynamic, involving a programmed switch from cell surface receptor to intracellular receptor. Broad application of genetic knockout approaches will chart functional landscapes of receptors and endocytic pathways hijacked by viruses.

Entities:  

Keywords:  Ebola virus; Lassa virus; genetic screens; receptor identification; virus entry

Mesh:

Substances:

Year:  2015        PMID: 26958914      PMCID: PMC4982367          DOI: 10.1146/annurev-virology-100114-055119

Source DB:  PubMed          Journal:  Annu Rev Virol        ISSN: 2327-056X            Impact factor:   10.431


  121 in total

1.  A haploid genetic screen identifies the major facilitator domain containing 2A (MFSD2A) transporter as a key mediator in the response to tunicamycin.

Authors:  Jan H Reiling; Clary B Clish; Jan E Carette; Malini Varadarajan; Thijn R Brummelkamp; David M Sabatini
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-15       Impact factor: 11.205

2.  Junction adhesion molecule is a receptor for reovirus.

Authors:  E S Barton; J C Forrest; J L Connolly; J D Chappell; Y Liu; F J Schnell; A Nusrat; C A Parkos; T S Dermody
Journal:  Cell       Date:  2001-02-09       Impact factor: 41.582

3.  Activation of the interferon system by short-interfering RNAs.

Authors:  Carol A Sledz; Michelle Holko; Michael J de Veer; Robert H Silverman; Bryan R G Williams
Journal:  Nat Cell Biol       Date:  2003-08-24       Impact factor: 28.824

4.  LRP1 is a receptor for Clostridium perfringens TpeL toxin indicating a two-receptor model of clostridial glycosylating toxins.

Authors:  Björn Schorch; Shuo Song; Ferdy R van Diemen; Hans H Bock; Petra May; Joachim Herz; Thijn R Brummelkamp; Panagiotis Papatheodorou; Klaus Aktories
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-15       Impact factor: 11.205

5.  Generation of haploid embryonic stem cells from Macaca fascicularis monkey parthenotes.

Authors:  Hui Yang; Zhen Liu; Yu Ma; Cuiqing Zhong; Qi Yin; Chikai Zhou; Linyu Shi; Yijun Cai; Hanzhi Zhao; Hui Wang; Fan Tang; Yan Wang; Chenchen Zhang; Xin-Yuan Liu; Dongmei Lai; Ying Jin; Qiang Sun; Jinsong Li
Journal:  Cell Res       Date:  2013-07-16       Impact factor: 25.617

6.  Genetic exploration of the exit from self-renewal using haploid embryonic stem cells.

Authors:  Martin Leeb; Sabine Dietmann; Maike Paramor; Hitoshi Niwa; Austin Smith
Journal:  Cell Stem Cell       Date:  2014-01-09       Impact factor: 24.633

Review 7.  Receptor recognition and cross-species infections of SARS coronavirus.

Authors:  Fang Li
Journal:  Antiviral Res       Date:  2013-08-29       Impact factor: 5.970

8.  Dph7 catalyzes a previously unknown demethylation step in diphthamide biosynthesis.

Authors:  Zhewang Lin; Xiaoyang Su; Wei Chen; Bo Ci; Sheng Zhang; Hening Lin
Journal:  J Am Chem Soc       Date:  2014-04-24       Impact factor: 15.419

9.  Megabase-scale deletion using CRISPR/Cas9 to generate a fully haploid human cell line.

Authors:  Patrick Essletzbichler; Tomasz Konopka; Federica Santoro; Doris Chen; Bianca V Gapp; Robert Kralovics; Thijn R Brummelkamp; Sebastian M B Nijman; Tilmann Bürckstümmer
Journal:  Genome Res       Date:  2014-11-04       Impact factor: 9.043

10.  Dual host-virus arms races shape an essential housekeeping protein.

Authors:  Ann Demogines; Jonathan Abraham; Hyeryun Choe; Michael Farzan; Sara L Sawyer
Journal:  PLoS Biol       Date:  2013-05-28       Impact factor: 8.029

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  13 in total

1.  Protocadherin-1 is essential for cell entry by New World hantaviruses.

Authors:  Rohit K Jangra; Andrew S Herbert; Rong Li; Lucas T Jae; Lara M Kleinfelter; Megan M Slough; Sarah L Barker; Pablo Guardado-Calvo; Gleyder Román-Sosa; M Eugenia Dieterle; Ana I Kuehne; Nicolás A Muena; Ariel S Wirchnianski; Elisabeth K Nyakatura; J Maximilian Fels; Melinda Ng; Eva Mittler; James Pan; Sushma Bharrhan; Anna Z Wec; Jonathan R Lai; Sachdev S Sidhu; Nicole D Tischler; Félix A Rey; Jason Moffat; Thijn R Brummelkamp; Zhongde Wang; John M Dye; Kartik Chandran
Journal:  Nature       Date:  2018-11-21       Impact factor: 49.962

2.  AAVR: A Multi-Serotype Receptor for AAV.

Authors:  Candace Summerford; Jarrod S Johnson; R Jude Samulski
Journal:  Mol Ther       Date:  2016-04       Impact factor: 11.454

3.  E3 ubiquitin ligase Mindbomb 1 facilitates nuclear delivery of adenovirus genomes.

Authors:  Stephanie L Sarbanes; Vincent A Blomen; Eric Lam; Søren Heissel; Joseph M Luna; Thijn R Brummelkamp; Erik Falck-Pedersen; H-Heinrich Hoffmann; Charles M Rice
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-21       Impact factor: 11.205

Review 4.  Host determinants of adeno-associated viral vector entry.

Authors:  Sirika Pillay; Jan E Carette
Journal:  Curr Opin Virol       Date:  2017-06-30       Impact factor: 7.090

5.  Diverse Viruses Require the Calcium Transporter SPCA1 for Maturation and Spread.

Authors:  H-Heinrich Hoffmann; William M Schneider; Vincent A Blomen; Margaret A Scull; Alain Hovnanian; Thijn R Brummelkamp; Charles M Rice
Journal:  Cell Host Microbe       Date:  2017-10-11       Impact factor: 21.023

Review 6.  A CRISPR toolbox to study virus-host interactions.

Authors:  Andreas S Puschnik; Karim Majzoub; Yaw Shin Ooi; Jan E Carette
Journal:  Nat Rev Microbiol       Date:  2017-04-19       Impact factor: 60.633

7.  Stress Decreases Host Viral Resistance and Increases Covid Susceptibility in Embryonic Stem Cells.

Authors:  Mohammed Abdulhasan; Ximena Ruden; Benjamin Rappolee; Sudipta Dutta; Katherine Gurdziel; Douglas M Ruden; Awoniyi O Awonuga; Steve J Korzeniewski; Elizabeth E Puscheck; Daniel A Rappolee
Journal:  Stem Cell Rev Rep       Date:  2021-06-21       Impact factor: 6.692

8.  Haploid Mammalian Genetic Screen Identifies UBXD8 as a Key Determinant of HMGCR Degradation and Cholesterol Biosynthesis.

Authors:  Anke Loregger; Matthijs Raaben; Josephine Tan; Saskia Scheij; Martina Moeton; Marlene van den Berg; Hila Gelberg-Etel; Elmer Stickel; Joseph Roitelman; Thijn Brummelkamp; Noam Zelcer
Journal:  Arterioscler Thromb Vasc Biol       Date:  2017-09-07       Impact factor: 8.311

Review 9.  Advances in high-throughput methods for the identification of virus receptors.

Authors:  Sarah V Barrass; Sarah J Butcher
Journal:  Med Microbiol Immunol       Date:  2019-12-21       Impact factor: 3.402

Review 10.  Glycomics and Proteomics Approaches to Investigate Early Adenovirus-Host Cell Interactions.

Authors:  Lisa Lasswitz; Naresh Chandra; Niklas Arnberg; Gisa Gerold
Journal:  J Mol Biol       Date:  2018-05-07       Impact factor: 5.469

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