Literature DB >> 24642199

Measurements of behavioral quiescence in Caenorhabditis elegans.

Stanislav Nagy1, David M Raizen2, David Biron3.   

Abstract

The nematode Caenorhabditis (C.) elegans, a long time work horse for behavioral genetic studies of locomotion, has recently been studied for quiescent behavior. Methods previously established for the study of C. elegans locomotion are not well-suited for the study of quiescent behavior. We describe in detail two computer vision approaches to distinguish quiescent from movement bouts focusing on the behavioral quiescence that occurs during fourth larval stage lethargus, a transition stage between the larva and the adult. The first is the frame subtraction method, which consists of subtraction of temporally adjacent images as a sensitive way to detect motion. The second, which is more computationally intensive, is the posture analysis method, which consists of analysis of the rate of local angle change of the animal's body. Quiescence measurements should be done continuously while minimizing sensory perturbation of the animal.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Elegans; Lethargus; Machine vision; Molting; Quiescence; Sleep

Mesh:

Year:  2014        PMID: 24642199      PMCID: PMC4112141          DOI: 10.1016/j.ymeth.2014.03.009

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  37 in total

1.  Social feeding in Caenorhabditis elegans is induced by neurons that detect aversive stimuli.

Authors:  Mario de Bono; David M Tobin; M Wayne Davis; Leon Avery; Cornelia I Bargmann
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2.  The dauerlarva, a post-embryonic developmental variant of the nematode Caenorhabditis elegans.

Authors:  R C Cassada; R L Russell
Journal:  Dev Biol       Date:  1975-10       Impact factor: 3.582

3.  Essentials of sleep recordings in Drosophila: moving beyond sleep time.

Authors:  Rozi Andretic; Paul J Shaw
Journal:  Methods Enzymol       Date:  2005       Impact factor: 1.600

4.  Mutations in a C. elegans Gqalpha gene disrupt movement, egg laying, and viability.

Authors:  L Brundage; L Avery; A Katz; U J Kim; J E Mendel; P W Sternberg; M I Simon
Journal:  Neuron       Date:  1996-05       Impact factor: 17.173

5.  Animal sleep: a review of sleep duration across phylogeny.

Authors:  S S Campbell; I Tobler
Journal:  Neurosci Biobehav Rev       Date:  1984       Impact factor: 8.989

6.  Regulation of body size and behavioral state of C. elegans by sensory perception and the EGL-4 cGMP-dependent protein kinase.

Authors:  Manabi Fujiwara; Piali Sengupta; Steven L McIntire
Journal:  Neuron       Date:  2002-12-19       Impact factor: 17.173

7.  Chronic behavioral disorders of human REM sleep: a new category of parasomnia.

Authors:  C H Schenck; S R Bundlie; M G Ettinger; M W Mahowald
Journal:  Sleep       Date:  1986-06       Impact factor: 5.849

8.  The genetics of Caenorhabditis elegans.

Authors:  S Brenner
Journal:  Genetics       Date:  1974-05       Impact factor: 4.562

9.  Periodic leg movements during sleep in the elderly.

Authors:  D Bliwise; D Petta; W Seidel; W Dement
Journal:  Arch Gerontol Geriatr       Date:  1985-10       Impact factor: 3.250

10.  A distributed chemosensory circuit for oxygen preference in C. elegans.

Authors:  Andy J Chang; Nikolas Chronis; David S Karow; Michael A Marletta; Cornelia I Bargmann
Journal:  PLoS Biol       Date:  2006-09       Impact factor: 8.029

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  28 in total

1.  Expanding the C. elegans toolbox into a toolshed.

Authors:  Arjumand Ghazi; Judith Yanowitz; Gary A Silverman
Journal:  Methods       Date:  2014-08-01       Impact factor: 3.608

2.  A wake-active locomotion circuit depolarizes a sleep-active neuron to switch on sleep.

Authors:  Elisabeth Maluck; Inka Busack; Judith Besseling; Florentin Masurat; Michal Turek; Karl Emanuel Busch; Henrik Bringmann
Journal:  PLoS Biol       Date:  2020-02-20       Impact factor: 8.029

Review 3.  Molting in C. elegans.

Authors:  Vladimir Lažetić; David S Fay
Journal:  Worm       Date:  2017-05-17

4.  Quantitative imaging of sleep behavior in Caenorhabditis elegans and larval Drosophila melanogaster.

Authors:  Matthew A Churgin; Milan Szuperak; Kristen C Davis; David M Raizen; Christopher Fang-Yen; Matthew S Kayser
Journal:  Nat Protoc       Date:  2019-04-05       Impact factor: 13.491

Review 5.  The Sleep in Caenorhabditis elegans: What We Know Until Now.

Authors:  Maryam Moosavi; Gholam Reza Hatam
Journal:  Mol Neurobiol       Date:  2017-01-11       Impact factor: 5.590

6.  Interneurons Regulate Locomotion Quiescence via Cyclic Adenosine Monophosphate Signaling During Stress-Induced Sleep in Caenorhabditis elegans.

Authors:  Alana Cianciulli; Lauren Yoslov; Kristen Buscemi; Nicole Sullivan; Ryan T Vance; Francis Janton; Mary R Szurgot; Thomas Buerkert; Edwin Li; Matthew D Nelson
Journal:  Genetics       Date:  2019-07-10       Impact factor: 4.562

7.  Food responsiveness regulates episodic behavioral states in Caenorhabditis elegans.

Authors:  Richard J McCloskey; Anthony D Fouad; Matthew A Churgin; Christopher Fang-Yen
Journal:  J Neurophysiol       Date:  2017-02-22       Impact factor: 2.714

8.  A Conserved GEF for Rho-Family GTPases Acts in an EGF Signaling Pathway to Promote Sleep-like Quiescence in Caenorhabditis elegans.

Authors:  Amanda L Fry; Jocelyn T Laboy; Huiyan Huang; Anne C Hart; Kenneth R Norman
Journal:  Genetics       Date:  2016-01-22       Impact factor: 4.562

9.  Inferring temporal organization of postembryonic development from high-content behavioral tracking.

Authors:  Denis F Faerberg; Victor Gurarie; Ilya Ruvinsky
Journal:  Dev Biol       Date:  2021-02-24       Impact factor: 3.148

10.  A Generative Statistical Algorithm for Automatic Detection of Complex Postures.

Authors:  Stanislav Nagy; Marc Goessling; Yali Amit; David Biron
Journal:  PLoS Comput Biol       Date:  2015-10-06       Impact factor: 4.475

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