Literature DB >> 33636188

Inferring temporal organization of postembryonic development from high-content behavioral tracking.

Denis F Faerberg1, Victor Gurarie2, Ilya Ruvinsky3.   

Abstract

Understanding temporal regulation of development remains an important challenge. Whereas average, species-typical timing of many developmental processes has been established, less is known about inter-individual variability and correlations in timing of specific events. We addressed these questions in the context of postembryonic development in Caenorhabditis elegans. Based on patterns of locomotor activity of freely moving animals, we inferred durations of four larval stages (L1-L4) in over 100 individuals. Analysis of these data supports several conclusions. Individuals have consistently faster or slower rates of development because durations of L1 through L3 stages are positively correlated. The last larval stage, the L4, is less variable than the earlier stages and its duration is largely independent of the rate of early larval development, implying existence of two distinct larval epochs. We describe characteristic patterns of variation and correlation, as well as the fact that stage durations tend to scale relative to total developmental time. This scaling relationship suggests that each larval stage is not limited by an absolute duration, but is instead terminated when a subset of events that must occur prior to adulthood have been completed. The approach described here offers a scalable platform that will facilitate the study of temporal regulation of postembryonic development.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  C. elegans; Developmental timing; Larval; Postembryonic; Variability

Mesh:

Substances:

Year:  2021        PMID: 33636188      PMCID: PMC8107144          DOI: 10.1016/j.ydbio.2021.02.007

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.148


  50 in total

1.  The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans.

Authors:  B J Reinhart; F J Slack; M Basson; A E Pasquinelli; J C Bettinger; A E Rougvie; H R Horvitz; G Ruvkun
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

2.  Post-embryonic cell lineages of the nematode, Caenorhabditis elegans.

Authors:  J E Sulston; H R Horvitz
Journal:  Dev Biol       Date:  1977-03       Impact factor: 3.582

3.  The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA.

Authors:  E G Moss; R C Lee; V Ambros
Journal:  Cell       Date:  1997-03-07       Impact factor: 41.582

4.  Mutations in the Caenorhabditis elegans serotonin reuptake transporter MOD-5 reveal serotonin-dependent and -independent activities of fluoxetine.

Authors:  R Ranganathan; E R Sawin; C Trent; H R Horvitz
Journal:  J Neurosci       Date:  2001-08-15       Impact factor: 6.167

5.  Food and metabolic signalling defects in a Caenorhabditis elegans serotonin-synthesis mutant.

Authors:  J Y Sze; M Victor; C Loer; Y Shi; G Ruvkun
Journal:  Nature       Date:  2000-02-03       Impact factor: 49.962

6.  The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14.

Authors:  R C Lee; R L Feinbaum; V Ambros
Journal:  Cell       Date:  1993-12-03       Impact factor: 41.582

7.  Hormonal signal amplification mediates environmental conditions during development and controls an irreversible commitment to adulthood.

Authors:  Oren N Schaedel; Birgit Gerisch; Adam Antebi; Paul W Sternberg
Journal:  PLoS Biol       Date:  2012-04-10       Impact factor: 8.029

8.  Maternal age generates phenotypic variation in Caenorhabditis elegans.

Authors:  Marcos Francisco Perez; Mirko Francesconi; Cristina Hidalgo-Carcedo; Ben Lehner
Journal:  Nature       Date:  2017-11-29       Impact factor: 49.962

9.  Long-term time-lapse microscopy of C. elegans post-embryonic development.

Authors:  Nicola Gritti; Simone Kienle; Olga Filina; Jeroen Sebastiaan van Zon
Journal:  Nat Commun       Date:  2016-08-25       Impact factor: 14.919

Review 10.  What does time mean in development?

Authors:  Miki Ebisuya; James Briscoe
Journal:  Development       Date:  2018-06-26       Impact factor: 6.868

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  3 in total

1.  Coupling of growth rate and developmental tempo reduces body size heterogeneity in C. elegans.

Authors:  Klement Stojanovski; Helge Großhans; Benjamin D Towbin
Journal:  Nat Commun       Date:  2022-06-06       Impact factor: 17.694

2.  Temporal scaling in C. elegans larval development.

Authors:  Olga Filina; Burak Demirbas; Rik Haagmans; Jeroen S van Zon
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-09       Impact factor: 12.779

3.  Deviations from temporal scaling support a stage-specific regulation for C. elegans postembryonic development.

Authors:  Alejandro Mata-Cabana; Francisco Javier Romero-Expósito; Mirjam Geibel; Francine Amaral Piubeli; Martha Merrow; María Olmedo
Journal:  BMC Biol       Date:  2022-04-27       Impact factor: 7.364

  3 in total

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