Literature DB >> 24637758

Crystallization and preliminary X-ray diffraction analysis of human DNA primase.

Andrey G Baranovskiy1, Jianyou Gu1, Nigar D Babayeva1, Vinod B Agarkar1, Yoshiaki Suwa1, Tahir H Tahirov1.   

Abstract

Human primase synthesizes RNA primers and transfers them to the active site of Pol α with subsequent extension with dNTPs. Human primase is a heterodimer of two subunits: a small catalytic subunit (p49) and a large subunit (p58). The structural details of the initiation and elongation steps of primer synthesis, as well as primer length counting, are not known. To address these questions, structural studies of human primase were initiated. Two types of crystals were obtained. The best diffracting crystals belonged to space group P1, with unit-cell parameters a = 86.2, b = 88.9, c = 94.68 Å, α = 93.82, β = 96.57, γ = 111.72°, and contained two heterodimers of full-length p49 and p59 subunits in the asymmetric unit.

Entities:  

Keywords:  DNA replication; human DNA primase; p49 subunit; p58 subunit

Mesh:

Substances:

Year:  2014        PMID: 24637758      PMCID: PMC3936435          DOI: 10.1107/S2053230X13034432

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  15 in total

1.  Crystal structure of a DNA-dependent RNA polymerase (DNA primase).

Authors:  M A Augustin; R Huber; J T Kaiser
Journal:  Nat Struct Biol       Date:  2001-01

2.  Structure of the heterodimeric core primase.

Authors:  Si-Houy Lao-Sirieix; Ravi K Nookala; Pietro Roversi; Stephen D Bell; Luca Pellegrini
Journal:  Nat Struct Mol Biol       Date:  2005-11-06       Impact factor: 15.369

3.  An iron-sulfur cluster in the C-terminal domain of the p58 subunit of human DNA primase.

Authors:  Brian E Weiner; Hao Huang; Brian M Dattilo; Mark J Nilges; Ellen Fanning; Walter J Chazin
Journal:  J Biol Chem       Date:  2007-09-24       Impact factor: 5.157

4.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

Review 5.  The Pol α-primase complex.

Authors:  Luca Pellegrini
Journal:  Subcell Biochem       Date:  2012

6.  Mutations in conserved yeast DNA primase domains impair DNA replication in vivo.

Authors:  S Francesconi; M P Longhese; A Piseri; C Santocanale; G Lucchini; P Plevani
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-01       Impact factor: 11.205

7.  The p58 subunit of human DNA primase is important for primer initiation, elongation, and counting.

Authors:  Laura K Zerbe; Robert D Kuchta
Journal:  Biochemistry       Date:  2002-04-16       Impact factor: 3.162

8.  Expression, purification, and characterization of the two human primase subunits and truncated complexes from Escherichia coli.

Authors:  W C Copeland
Journal:  Protein Expr Purif       Date:  1997-02       Impact factor: 1.650

9.  Crystal structure of the Pyrococcus horikoshii DNA primase-UTP complex: implications for the mechanism of primer synthesis.

Authors:  Nobutoshi Ito; Osamu Nureki; Mikako Shirouzu; Shigeyuki Yokoyama; Fumio Hanaoka
Journal:  Genes Cells       Date:  2003-12       Impact factor: 1.891

10.  An iron-sulfur domain of the eukaryotic primase is essential for RNA primer synthesis.

Authors:  Sebastian Klinge; Judy Hirst; Joseph D Maman; Torsten Krude; Luca Pellegrini
Journal:  Nat Struct Mol Biol       Date:  2007-08-19       Impact factor: 15.369

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  4 in total

1.  Insight into the Human DNA Primase Interaction with Template-Primer.

Authors:  Andrey G Baranovskiy; Yinbo Zhang; Yoshiaki Suwa; Jianyou Gu; Nigar D Babayeva; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2015-12-28       Impact factor: 5.157

2.  Crystal structure of the human primase.

Authors:  Andrey G Baranovskiy; Yinbo Zhang; Yoshiaki Suwa; Nigar D Babayeva; Jianyou Gu; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2014-12-30       Impact factor: 5.157

3.  The C-terminal domain of the DNA polymerase catalytic subunit regulates the primase and polymerase activities of the human DNA polymerase α-primase complex.

Authors:  Yinbo Zhang; Andrey G Baranovskiy; Tahir H Tahirov; Youri I Pavlov
Journal:  J Biol Chem       Date:  2014-06-24       Impact factor: 5.157

4.  Mechanism of Concerted RNA-DNA Primer Synthesis by the Human Primosome.

Authors:  Andrey G Baranovskiy; Nigar D Babayeva; Yinbo Zhang; Jianyou Gu; Yoshiaki Suwa; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2016-03-14       Impact factor: 5.157

  4 in total

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